RNA–Protein interactions for RNA: ENST00000541713.5

PTPN1-202, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

TSL 2 BASIC

Gene PTPN1, Length 3,469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-202ENST00000541713 A0A1B0GUS0 222 aa11.33□□□□□ -0.6
PTPN1-202ENST00000541713 KIR2DL2P43627 348 aaPredicted RBP11.33□□□□□ -0.6
PTPN1-202ENST00000541713 PYY3Q5JQD4 70 aa11.33□□□□□ -0.6
PTPN1-202ENST00000541713 WDR82Q6UXN9 313 aa11.33□□□□□ -0.6
PTPN1-202ENST00000541713 C16orf82Q7Z2V1 217 aa11.33□□□□□ -0.6
PTPN1-202ENST00000541713 PCGF1Q9BSM1 259 aa11.33□□□□□ -0.6
PTPN1-202ENST00000541713 TUBA4BQ9H853 241 aa11.33□□□□□ -0.6
PTPN1-202ENST00000541713 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.32□□□□□ -0.6
PTPN1-202ENST00000541713 CXorf65A6NEN9 183 aa11.32□□□□□ -0.6
PTPN1-202ENST00000541713 THBS3P49746 956 aa11.32□□□□□ -0.6
PTPN1-202ENST00000541713 ZNF506Q5JVG8 444 aa11.32□□□□□ -0.6
PTPN1-202ENST00000541713 LHFPL4Q7Z7J7 247 aa11.32□□□□□ -0.6
PTPN1-202ENST00000541713 MRPS18CQ9Y3D5 142 aaKnown RBP11.32□□□□□ -0.6
PTPN1-202ENST00000541713 IFITM10A6NMD0 228 aa11.32□□□□□ -0.6
PTPN1-202ENST00000541713 MARCH11A6NNE9 402 aa11.32□□□□□ -0.6
PTPN1-202ENST00000541713 UBE2CO00762 179 aa11.32□□□□□ -0.6
PTPN1-202ENST00000541713 OR9G9P0C7N8 305 aa11.32□□□□□ -0.6
PTPN1-202ENST00000541713 COX5BP10606 129 aa11.32□□□□□ -0.6
PTPN1-202ENST00000541713 REG1BP48304 166 aa11.32□□□□□ -0.6
PTPN1-202ENST00000541713 MSMPQ1L6U9 139 aa11.32□□□□□ -0.6
PTPN1-202ENST00000541713 CD177Q8N6Q3 437 aa11.32□□□□□ -0.6
PTPN1-202ENST00000541713 GMPPAQ96IJ6 420 aaPredicted RBP11.32□□□□□ -0.6
PTPN1-202ENST00000541713 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.32□□□□□ -0.6
PTPN1-202ENST00000541713 GAR1Q9NY12 217 aaKnown RBP11.32□□□□□ -0.6
PTPN1-202ENST00000541713 SLC31A2O15432 143 aa11.32□□□□□ -0.6
PTPN1-202ENST00000541713 PRDX2P32119 198 aa11.32□□□□□ -0.6
PTPN1-202ENST00000541713 BRWD1-AS2P59051 145 aa11.32□□□□□ -0.6
PTPN1-202ENST00000541713 PEAR1Q5VY43 1037 aaPredicted RBP11.32□□□□□ -0.6
PTPN1-202ENST00000541713 ABHD5Q8WTS1 349 aa11.32□□□□□ -0.6
PTPN1-202ENST00000541713 R3HDM4Q96D70 268 aa11.32□□□□□ -0.6
PTPN1-202ENST00000541713 ZNF251Q9BRH9 671 aa11.32□□□□□ -0.6
PTPN1-202ENST00000541713 PKIBQ9C010 78 aa11.32□□□□□ -0.6
PTPN1-202ENST00000541713 KLF2Q9Y5W3 355 aaPredicted RBP11.32□□□□□ -0.6
PTPN1-202ENST00000541713 NAV3Q8IVL0 2385 aa11.31□□□□□ -0.6
PTPN1-202ENST00000541713 CD33P20138 364 aa11.31□□□□□ -0.6
PTPN1-202ENST00000541713 GATA2P23769 480 aaPredicted RBP11.31□□□□□ -0.6
PTPN1-202ENST00000541713 ATP5G3P48201 142 aa11.31□□□□□ -0.6
PTPN1-202ENST00000541713 CATR1Q13166 79 aa11.31□□□□□ -0.6
PTPN1-202ENST00000541713 MSMO1Q15800 293 aa11.31□□□□□ -0.6
PTPN1-202ENST00000541713 LRRC75BQ2VPJ9 315 aa11.31□□□□□ -0.6
PTPN1-202ENST00000541713 Q8NFD4 153 aa11.31□□□□□ -0.6
PTPN1-202ENST00000541713 A0A1W2PPV4 95 aa11.31□□□□□ -0.6
PTPN1-202ENST00000541713 LRRC30A6NM36 301 aa11.31□□□□□ -0.6
PTPN1-202ENST00000541713 ZNF718Q3SXZ3 478 aa11.31□□□□□ -0.6
PTPN1-202ENST00000541713 KHDC3LQ587J8 217 aa11.31□□□□□ -0.6
PTPN1-202ENST00000541713 MIC13Q5XKP0 118 aa11.31□□□□□ -0.6
PTPN1-202ENST00000541713 ACP7Q6ZNF0 438 aa11.31□□□□□ -0.6
PTPN1-202ENST00000541713 OR8G5Q8NG78 346 aa11.31□□□□□ -0.6
PTPN1-202ENST00000541713 OR4A16Q8NH70 328 aa11.31□□□□□ -0.6
PTPN1-202ENST00000541713 OR2V2Q96R30 315 aa11.31□□□□□ -0.6
PTPN1-202ENST00000541713 GP6Q9HCN6 339 aa11.31□□□□□ -0.6
PTPN1-202ENST00000541713 SPG11Q96JI7 2443 aa11.3□□□□□ -0.6
PTPN1-202ENST00000541713 AQP7O14520 342 aa11.3□□□□□ -0.6
PTPN1-202ENST00000541713 PHOX2AO14813 284 aa11.3□□□□□ -0.6
PTPN1-202ENST00000541713 PSMB3P49720 205 aa11.3□□□□□ -0.6
PTPN1-202ENST00000541713 CCL8P80075 99 aa11.3□□□□□ -0.6
PTPN1-202ENST00000541713 C11orf53Q8IXP5 236 aa11.3□□□□□ -0.6
PTPN1-202ENST00000541713 C1orf87Q8N0U7 546 aa11.3□□□□□ -0.6
PTPN1-202ENST00000541713 LYG1Q8N1E2 194 aa11.3□□□□□ -0.6
PTPN1-202ENST00000541713 CA5BP1Q8WTZ4 195 aa11.3□□□□□ -0.6
PTPN1-202ENST00000541713 CLDN34H7C241 214 aa11.3□□□□□ -0.6
PTPN1-202ENST00000541713 RRHO14718 337 aa11.3□□□□□ -0.6
PTPN1-202ENST00000541713 SPINT2O43291 252 aa11.3□□□□□ -0.6
PTPN1-202ENST00000541713 CLDN14O95500 239 aa11.3□□□□□ -0.6
PTPN1-202ENST00000541713 CYB5R3P00387 301 aaPredicted RBP11.3□□□□□ -0.6
PTPN1-202ENST00000541713 DLX1P56177 255 aa11.3□□□□□ -0.6
PTPN1-202ENST00000541713 TMEM41BQ5BJD5 291 aa11.3□□□□□ -0.6
PTPN1-202ENST00000541713 ZNF66Q6ZN08 573 aa11.3□□□□□ -0.6
PTPN1-202ENST00000541713 MOB3BQ86TA1 216 aa11.3□□□□□ -0.6
PTPN1-202ENST00000541713 ZNF645Q8N7E2 425 aa11.3□□□□□ -0.6
PTPN1-202ENST00000541713 EDARADDQ8WWZ3 215 aa11.3□□□□□ -0.6
PTPN1-202ENST00000541713 PARLQ9H300 379 aa11.3□□□□□ -0.6
PTPN1-202ENST00000541713 HCFC1P51610 2035 aa11.3□□□□□ -0.6
PTPN1-202ENST00000541713 H7BYZ3 331 aa11.3□□□□□ -0.6
PTPN1-202ENST00000541713 K7EM74 188 aa11.3□□□□□ -0.6
PTPN1-202ENST00000541713 NDUFS6O75380 124 aaKnown RBP11.3□□□□□ -0.6
PTPN1-202ENST00000541713 CD81P60033 236 aa11.3□□□□□ -0.6
PTPN1-202ENST00000541713 TAAR6Q96RI8 345 aa11.3□□□□□ -0.6
PTPN1-202ENST00000541713 NDUFB4O95168 129 aa11.29□□□□□ -0.6
PTPN1-202ENST00000541713 SLC35B1P78383 322 aa11.29□□□□□ -0.6
PTPN1-202ENST00000541713 MEF2BQ02080 365 aaPredicted RBP11.29□□□□□ -0.6
PTPN1-202ENST00000541713 FAM27E3Q08E93 113 aa11.29□□□□□ -0.6
PTPN1-202ENST00000541713 NRN1LQ496H8 165 aa11.29□□□□□ -0.6
PTPN1-202ENST00000541713 Q6ZT83 130 aa11.29□□□□□ -0.6
PTPN1-202ENST00000541713 METTL1Q9UBP6 276 aaKnown RBP11.29□□□□□ -0.6
PTPN1-202ENST00000541713 FUT9Q9Y231 359 aa11.29□□□□□ -0.6
PTPN1-202ENST00000541713 S100A8P05109 93 aa11.29□□□□□ -0.6
PTPN1-202ENST00000541713 FTH1P19P0C7X4 201 aa11.29□□□□□ -0.6
PTPN1-202ENST00000541713 ZNF134P52741 427 aa11.29□□□□□ -0.6
PTPN1-202ENST00000541713 PDLIM3Q53GG5 364 aaPredicted RBP11.29□□□□□ -0.6
PTPN1-202ENST00000541713 OR13D1Q8NGV5 346 aa11.29□□□□□ -0.6
PTPN1-202ENST00000541713 ITLN1Q8WWA0 313 aa11.29□□□□□ -0.6
PTPN1-202ENST00000541713 EGLN1Q9GZT9 426 aa11.29□□□□□ -0.6
PTPN1-202ENST00000541713 VAX2Q9UIW0 290 aa11.29□□□□□ -0.6
PTPN1-202ENST00000541713 OOEPA6NGQ2 149 aa11.29□□□□□ -0.6
PTPN1-202ENST00000541713 DVL1O14640 695 aa11.29□□□□□ -0.6
PTPN1-202ENST00000541713 IGHV2-5P01817 119 aa11.29□□□□□ -0.6
PTPN1-202ENST00000541713 ERVK11-1P61568 191 aa11.29□□□□□ -0.6
PTPN1-202ENST00000541713 GAMTQ14353 236 aa11.29□□□□□ -0.6
PTPN1-202ENST00000541713 P2RY6Q15077 328 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms