RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 HBZP02008 142 aa8.66□□□□□ -1.02
CDC42SE1-207ENST00000540998 SLC25A6P12236 298 aa8.66□□□□□ -1.02
CDC42SE1-207ENST00000540998 CBLN1P23435 193 aa8.66□□□□□ -1.02
CDC42SE1-207ENST00000540998 CD82P27701 267 aa8.66□□□□□ -1.02
CDC42SE1-207ENST00000540998 MPV17P39210 176 aa8.66□□□□□ -1.02
CDC42SE1-207ENST00000540998 RPL29P47914 159 aaKnown RBP8.66□□□□□ -1.02
CDC42SE1-207ENST00000540998 SLC10A1Q14973 349 aa8.66□□□□□ -1.02
CDC42SE1-207ENST00000540998 OR1C1Q15619 314 aa8.66□□□□□ -1.02
CDC42SE1-207ENST00000540998 LINC01551Q86U37 167 aa8.66□□□□□ -1.02
CDC42SE1-207ENST00000540998 PINX1Q96BK5 328 aaKnown RBP8.66□□□□□ -1.02
CDC42SE1-207ENST00000540998 RIMS4Q9H426 269 aaPredicted RBP8.66□□□□□ -1.02
CDC42SE1-207ENST00000540998 FOXJ2Q9P0K8 574 aa8.66□□□□□ -1.02
CDC42SE1-207ENST00000540998 HSPB7Q9UBY9 170 aa8.66□□□□□ -1.02
CDC42SE1-207ENST00000540998 POLR3KQ9Y2Y1 108 aaPredicted RBP8.66□□□□□ -1.02
CDC42SE1-207ENST00000540998 TPRP12270 2363 aaKnown RBP8.66□□□□□ -1.02
CDC42SE1-207ENST00000540998 IGKV3D-15A0A087WSY6 115 aa8.66□□□□□ -1.02
CDC42SE1-207ENST00000540998 TRAV3A0A0B4J244 114 aa8.66□□□□□ -1.02
CDC42SE1-207ENST00000540998 MKRN2OSH3BPM6 223 aa8.66□□□□□ -1.02
CDC42SE1-207ENST00000540998 LEAP2Q969E1 77 aa8.66□□□□□ -1.02
CDC42SE1-207ENST00000540998 TMEM45BQ96B21 275 aa8.66□□□□□ -1.02
CDC42SE1-207ENST00000540998 FAM122AQ96E09 287 aa8.66□□□□□ -1.02
CDC42SE1-207ENST00000540998 NEIL1Q96FI4 390 aaPredicted RBP8.66□□□□□ -1.02
CDC42SE1-207ENST00000540998 TMEM147Q9BVK8 224 aa8.66□□□□□ -1.02
CDC42SE1-207ENST00000540998 BOKQ9UMX3 212 aaPredicted RBP8.66□□□□□ -1.02
CDC42SE1-207ENST00000540998 TRAPPC1Q9Y5R8 145 aa8.66□□□□□ -1.02
CDC42SE1-207ENST00000540998 PCNX2A6NKB5 2137 aa8.66□□□□□ -1.02
CDC42SE1-207ENST00000540998 INTS1Q8N201 2190 aaKnown RBP8.66□□□□□ -1.02
CDC42SE1-207ENST00000540998 POLEQ07864 2286 aa8.66□□□□□ -1.02
CDC42SE1-207ENST00000540998 SCO2A0A1W2PP80 73 aa8.65□□□□□ -1.02
CDC42SE1-207ENST00000540998 AQP7O14520 342 aa8.65□□□□□ -1.02
CDC42SE1-207ENST00000540998 HAND1O96004 215 aa8.65□□□□□ -1.02
CDC42SE1-207ENST00000540998 OR9G9P0C7N8 305 aa8.65□□□□□ -1.02
CDC42SE1-207ENST00000540998 MYOD1P15172 320 aa8.65□□□□□ -1.02
CDC42SE1-207ENST00000540998 PAX1P15863 534 aa8.65□□□□□ -1.02
CDC42SE1-207ENST00000540998 HOXA6P31267 233 aa8.65□□□□□ -1.02
CDC42SE1-207ENST00000540998 CDC34P49427 236 aaPredicted RBP8.65□□□□□ -1.02
CDC42SE1-207ENST00000540998 SSTP61278 116 aa8.65□□□□□ -1.02
CDC42SE1-207ENST00000540998 SLC35B1P78383 322 aa8.65□□□□□ -1.02
CDC42SE1-207ENST00000540998 HLA-DRB5Q30154 266 aa8.65□□□□□ -1.02
CDC42SE1-207ENST00000540998 SPATA31B1PQ5VZV4 182 aa8.65□□□□□ -1.02
CDC42SE1-207ENST00000540998 Q8N7P7 452 aa8.65□□□□□ -1.02
CDC42SE1-207ENST00000540998 SGMS2Q8NHU3 365 aa8.65□□□□□ -1.02
CDC42SE1-207ENST00000540998 SLC25A40Q8TBP6 338 aa8.65□□□□□ -1.02
CDC42SE1-207ENST00000540998 SPTBN2O15020 2390 aa8.65□□□□□ -1.02
CDC42SE1-207ENST00000540998 OR5B21A6NL26 309 aa8.65□□□□□ -1.02
CDC42SE1-207ENST00000540998 ZNF705FA8MVS1 300 aaPredicted RBP8.65□□□□□ -1.02
CDC42SE1-207ENST00000540998 ZNF705DP0CH99 300 aaPredicted RBP8.65□□□□□ -1.02
CDC42SE1-207ENST00000540998 ZNF705BP0CI00 300 aaPredicted RBP8.65□□□□□ -1.02
CDC42SE1-207ENST00000540998 ADMP35318 185 aa8.65□□□□□ -1.02
CDC42SE1-207ENST00000540998 CNN1P51911 297 aaKnown RBP8.65□□□□□ -1.02
CDC42SE1-207ENST00000540998 MIC13Q5XKP0 118 aa8.65□□□□□ -1.02
CDC42SE1-207ENST00000540998 ZNF709Q8N972 641 aa8.65□□□□□ -1.02
CDC42SE1-207ENST00000540998 AGMATQ9BSE5 352 aa8.65□□□□□ -1.02
CDC42SE1-207ENST00000540998 C2orf88Q9BSF0 95 aa8.65□□□□□ -1.02
CDC42SE1-207ENST00000540998 ACTR3CQ9C0K3 210 aaPredicted RBP8.65□□□□□ -1.02
CDC42SE1-207ENST00000540998 PLXNB1O43157 2135 aa8.65□□□□□ -1.03
CDC42SE1-207ENST00000540998 TECTAO75443 2155 aa8.65□□□□□ -1.03
CDC42SE1-207ENST00000540998 TRBV6-6A0A0A6YYG2 114 aa8.65□□□□□ -1.03
CDC42SE1-207ENST00000540998 A0A1W2PNU3 283 aaPredicted RBP8.65□□□□□ -1.03
CDC42SE1-207ENST00000540998 SERPINA7P05543 415 aa8.65□□□□□ -1.03
CDC42SE1-207ENST00000540998 ARL14EPLP0DKL9 152 aa8.65□□□□□ -1.03
CDC42SE1-207ENST00000540998 COX5AP20674 150 aa8.65□□□□□ -1.03
CDC42SE1-207ENST00000540998 CDKN1AP38936 164 aa8.65□□□□□ -1.03
CDC42SE1-207ENST00000540998 BATFQ16520 125 aa8.65□□□□□ -1.03
CDC42SE1-207ENST00000540998 RNFT1Q5M7Z0 435 aa8.65□□□□□ -1.03
CDC42SE1-207ENST00000540998 OR13A1Q8NGR1 328 aa8.65□□□□□ -1.03
CDC42SE1-207ENST00000540998 COQ2Q96H96 371 aa8.65□□□□□ -1.03
CDC42SE1-207ENST00000540998 OBP2BQ9NPH6 170 aa8.65□□□□□ -1.03
CDC42SE1-207ENST00000540998 FKBP11Q9NYL4 201 aa8.65□□□□□ -1.03
CDC42SE1-207ENST00000540998 RNF114Q9Y508 228 aa8.65□□□□□ -1.03
CDC42SE1-207ENST00000540998 MPC1Q9Y5U8 109 aa8.65□□□□□ -1.03
CDC42SE1-207ENST00000540998 KMT2EQ8IZD2 1858 aa8.65□□□□□ -1.03
CDC42SE1-207ENST00000540998 PKDREJQ9NTG1 2253 aa8.64□□□□□ -1.03
CDC42SE1-207ENST00000540998 C15orf62A8K5M9 175 aa8.64□□□□□ -1.03
CDC42SE1-207ENST00000540998 CLDN14O95500 239 aa8.64□□□□□ -1.03
CDC42SE1-207ENST00000540998 PSG7Q13046 419 aa8.64□□□□□ -1.03
CDC42SE1-207ENST00000540998 DCAF12Q5T6F0 453 aa8.64□□□□□ -1.03
CDC42SE1-207ENST00000540998 H2BFWTQ7Z2G1 175 aa8.64□□□□□ -1.03
CDC42SE1-207ENST00000540998 ABHD12Q8N2K0 398 aa8.64□□□□□ -1.03
CDC42SE1-207ENST00000540998 GBGT1Q8N5D6 347 aa8.64□□□□□ -1.03
CDC42SE1-207ENST00000540998 ZNF645Q8N7E2 425 aa8.64□□□□□ -1.03
CDC42SE1-207ENST00000540998 RNASEH2CQ8TDP1 164 aaKnown RBP8.64□□□□□ -1.03
CDC42SE1-207ENST00000540998 MANBALQ9NQG1 85 aa8.64□□□□□ -1.03
CDC42SE1-207ENST00000540998 IL17BQ9UHF5 180 aa8.64□□□□□ -1.03
CDC42SE1-207ENST00000540998 TMEM250H0YL14 139 aa8.64□□□□□ -1.03
CDC42SE1-207ENST00000540998 GGCTO75223 188 aaKnown RBP8.64□□□□□ -1.03
CDC42SE1-207ENST00000540998 RAC2P15153 192 aa8.64□□□□□ -1.03
CDC42SE1-207ENST00000540998 ABHD17BQ5VST6 288 aa8.64□□□□□ -1.03
CDC42SE1-207ENST00000540998 TMEM18Q96B42 140 aa8.64□□□□□ -1.03
CDC42SE1-207ENST00000540998 GALMQ96C23 342 aa8.64□□□□□ -1.03
CDC42SE1-207ENST00000540998 MRPL37Q9BZE1 423 aaKnown RBP8.64□□□□□ -1.03
CDC42SE1-207ENST00000540998 TP53TG3Q9ULZ0 132 aa8.64□□□□□ -1.03
CDC42SE1-207ENST00000540998 PPIAL4AQ9Y536 164 aa8.64□□□□□ -1.03
CDC42SE1-207ENST00000540998 PCNX1Q96RV3 2341 aa8.64□□□□□ -1.03
CDC42SE1-207ENST00000540998 NAV3Q8IVL0 2385 aa8.63□□□□□ -1.03
CDC42SE1-207ENST00000540998 MARCH11A6NNE9 402 aa8.63□□□□□ -1.03
CDC42SE1-207ENST00000540998 FCGR3BO75015 233 aa8.63□□□□□ -1.03
CDC42SE1-207ENST00000540998 FOXH1O75593 365 aa8.63□□□□□ -1.03
CDC42SE1-207ENST00000540998 ARR3P36575 388 aa8.63□□□□□ -1.03
CDC42SE1-207ENST00000540998 RPL15P61313 204 aaKnown RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms