RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 DOCK4Q8N1I0 1966 aa4.54□□□□□ -1.68
LRP6-203ENST00000538239 IQCF6A8MYZ5 107 aa4.54□□□□□ -1.68
LRP6-203ENST00000538239 H3BTX0 84 aa4.54□□□□□ -1.68
LRP6-203ENST00000538239 SCO1O75880 301 aa4.54□□□□□ -1.68
LRP6-203ENST00000538239 G0S2P27469 103 aa4.54□□□□□ -1.68
LRP6-203ENST00000538239 UNC119Q13432 240 aa4.54□□□□□ -1.68
LRP6-203ENST00000538239 WDFY1Q8IWB7 410 aa4.54□□□□□ -1.68
LRP6-203ENST00000538239 DPM3Q9P2X0 92 aa4.54□□□□□ -1.68
LRP6-203ENST00000538239 DUXBA0A1W2PPF3 345 aa4.54□□□□□ -1.68
LRP6-203ENST00000538239 MARCH11A6NNE9 402 aa4.54□□□□□ -1.68
LRP6-203ENST00000538239 J3QW42 95 aa4.54□□□□□ -1.68
LRP6-203ENST00000538239 PITX3O75364 302 aa4.54□□□□□ -1.68
LRP6-203ENST00000538239 CD24P25063 80 aa4.54□□□□□ -1.68
LRP6-203ENST00000538239 SUMO1P63165 101 aaKnown RBP4.54□□□□□ -1.68
LRP6-203ENST00000538239 DNM1P46Q6ZS02 220 aa4.54□□□□□ -1.68
LRP6-203ENST00000538239 TMEM116Q8NCL8 245 aa4.54□□□□□ -1.68
LRP6-203ENST00000538239 LSM10Q969L4 123 aaKnown RBP4.54□□□□□ -1.68
LRP6-203ENST00000538239 C1QTNF5Q9BXJ0 243 aa4.54□□□□□ -1.68
LRP6-203ENST00000538239 NXF2Q9GZY0 626 aaKnown RBP4.54□□□□□ -1.68
LRP6-203ENST00000538239 SLC35B3Q9H1N7 401 aa4.54□□□□□ -1.68
LRP6-203ENST00000538239 MFNGO00587 321 aa4.54□□□□□ -1.68
LRP6-203ENST00000538239 CCL3L1P16619 93 aa4.54□□□□□ -1.68
LRP6-203ENST00000538239 HIST1H3AP68431 136 aa4.54□□□□□ -1.68
LRP6-203ENST00000538239 PPP1R27Q86WC6 154 aa4.54□□□□□ -1.68
LRP6-203ENST00000538239 POC1AQ8NBT0 407 aa4.54□□□□□ -1.68
LRP6-203ENST00000538239 ST6GALNAC3Q8NDV1 305 aa4.54□□□□□ -1.68
LRP6-203ENST00000538239 OR11H7Q8NGC8 314 aa4.54□□□□□ -1.68
LRP6-203ENST00000538239 TMEM222Q9H0R3 208 aa4.54□□□□□ -1.68
LRP6-203ENST00000538239 TMPRSS5Q9H3S3 457 aa4.54□□□□□ -1.68
LRP6-203ENST00000538239 YTHDF2Q9Y5A9 579 aaKnown RBP4.54□□□□□ -1.68
LRP6-203ENST00000538239 MFSD2BA6NFX1 497 aa4.54□□□□□ -1.68
LRP6-203ENST00000538239 NPIPB9F8W1W9 429 aa4.54□□□□□ -1.68
LRP6-203ENST00000538239 RIGQ13278 110 aa4.54□□□□□ -1.68
LRP6-203ENST00000538239 C1QL2Q7Z5L3 287 aa4.54□□□□□ -1.68
LRP6-203ENST00000538239 STPG3Q8N7X2 389 aa4.54□□□□□ -1.68
LRP6-203ENST00000538239 ITLN2Q8WWU7 325 aaPredicted RBP4.54□□□□□ -1.68
LRP6-203ENST00000538239 RGP1Q92546 391 aaPredicted RBP4.54□□□□□ -1.68
LRP6-203ENST00000538239 DPH3Q96FX2 82 aa4.54□□□□□ -1.68
LRP6-203ENST00000538239 FAM210BQ96KR6 192 aa4.54□□□□□ -1.68
LRP6-203ENST00000538239 JMJD8Q96S16 334 aa4.54□□□□□ -1.68
LRP6-203ENST00000538239 ZNF430Q9H8G1 570 aaPredicted RBP4.54□□□□□ -1.68
LRP6-203ENST00000538239 TRAV40A0A0B4J280 105 aa4.54□□□□□ -1.68
LRP6-203ENST00000538239 TMEM8BA6NDV4 472 aa4.54□□□□□ -1.68
LRP6-203ENST00000538239 IGHV3-11P01762 117 aa4.54□□□□□ -1.68
LRP6-203ENST00000538239 NPPCP23582 126 aa4.54□□□□□ -1.68
LRP6-203ENST00000538239 SP5Q6BEB4 398 aaPredicted RBP4.54□□□□□ -1.68
LRP6-203ENST00000538239 RTN4RL2Q86UN3 420 aa4.54□□□□□ -1.68
LRP6-203ENST00000538239 OR13A1Q8NGR1 328 aa4.54□□□□□ -1.68
LRP6-203ENST00000538239 SLC25A33Q9BSK2 321 aa4.54□□□□□ -1.68
LRP6-203ENST00000538239 NAT8Q9UHE5 227 aa4.54□□□□□ -1.68
LRP6-203ENST00000538239 LOC390937A0A1W2PQ73 354 aa4.53□□□□□ -1.68
LRP6-203ENST00000538239 NPIPB13A6NJU9 1138 aa4.53□□□□□ -1.68
LRP6-203ENST00000538239 NPIPB4C9JG80 1138 aa4.53□□□□□ -1.68
LRP6-203ENST00000538239 RGS13O14921 159 aa4.53□□□□□ -1.68
LRP6-203ENST00000538239 PIN1P1O15428 100 aa4.53□□□□□ -1.68
LRP6-203ENST00000538239 RUNX1Q01196 453 aa4.53□□□□□ -1.68
LRP6-203ENST00000538239 VAX1Q5SQQ9 334 aa4.53□□□□□ -1.68
LRP6-203ENST00000538239 MRPL54Q6P161 138 aaKnown RBP4.53□□□□□ -1.68
LRP6-203ENST00000538239 DRAM1Q8N682 238 aa4.53□□□□□ -1.68
LRP6-203ENST00000538239 SYT8Q8NBV8 401 aa4.53□□□□□ -1.68
LRP6-203ENST00000538239 ANGPTL6Q8NI99 470 aa4.53□□□□□ -1.68
LRP6-203ENST00000538239 SSC4DQ8WTU2 575 aa4.53□□□□□ -1.68
LRP6-203ENST00000538239 TRAV30A0A087WSZ9 112 aa4.53□□□□□ -1.68
LRP6-203ENST00000538239 LOC389332A0A1B0GUA5 103 aa4.53□□□□□ -1.68
LRP6-203ENST00000538239 MOSP00540 346 aa4.53□□□□□ -1.68
LRP6-203ENST00000538239 CD81P60033 236 aa4.53□□□□□ -1.68
LRP6-203ENST00000538239 MIC13Q5XKP0 118 aa4.53□□□□□ -1.68
LRP6-203ENST00000538239 LRP11Q86VZ4 500 aa4.53□□□□□ -1.68
LRP6-203ENST00000538239 RSG1Q9BU20 258 aa4.53□□□□□ -1.68
LRP6-203ENST00000538239 TM4SF5O14894 197 aa4.53□□□□□ -1.68
LRP6-203ENST00000538239 MELTFP08582 738 aa4.53□□□□□ -1.68
LRP6-203ENST00000538239 HIST1H1BP16401 226 aaKnown RBP4.53□□□□□ -1.68
LRP6-203ENST00000538239 TIMP3P35625 211 aa4.53□□□□□ -1.68
LRP6-203ENST00000538239 C1orf100Q5SVJ3 147 aa4.53□□□□□ -1.68
LRP6-203ENST00000538239 MRPL20Q9BYC9 149 aaKnown RBP4.53□□□□□ -1.68
LRP6-203ENST00000538239 HSF4Q9ULV5 492 aa4.53□□□□□ -1.68
LRP6-203ENST00000538239 TANC1Q9C0D5 1861 aa4.53□□□□□ -1.68
LRP6-203ENST00000538239 TMEM189A5PLL7 270 aa4.53□□□□□ -1.68
LRP6-203ENST00000538239 HSPE1P61604 102 aaKnown RBP4.53□□□□□ -1.68
LRP6-203ENST00000538239 SNRPD3P62318 126 aaKnown RBP4.53□□□□□ -1.68
LRP6-203ENST00000538239 TMEM97Q5BJF2 176 aa4.53□□□□□ -1.68
LRP6-203ENST00000538239 CLEC19AQ6UXS0 136 aa4.53□□□□□ -1.68
LRP6-203ENST00000538239 ZNF841Q6ZN19 808 aa4.53□□□□□ -1.68
LRP6-203ENST00000538239 ZIC4Q8N9L1 334 aa4.53□□□□□ -1.68
LRP6-203ENST00000538239 LRRC75AQ8NAA5 344 aa4.53□□□□□ -1.68
LRP6-203ENST00000538239 OR5AU1Q8NGC0 362 aa4.53□□□□□ -1.68
LRP6-203ENST00000538239 OR10G8Q8NGN5 311 aa4.53□□□□□ -1.68
LRP6-203ENST00000538239 ST6GAL2Q96JF0 529 aa4.53□□□□□ -1.68
LRP6-203ENST00000538239 TCRBV4S1A1TA0A5B7 111 aa4.53□□□□□ -1.68
LRP6-203ENST00000538239 PROB1E7EW31 1015 aa4.53□□□□□ -1.68
LRP6-203ENST00000538239 K7ENP7 123 aa4.53□□□□□ -1.68
LRP6-203ENST00000538239 ZNF79Q15937 498 aa4.53□□□□□ -1.68
LRP6-203ENST00000538239 CYB5R2Q6BCY4 276 aa4.53□□□□□ -1.68
LRP6-203ENST00000538239 OR2D3Q8NGH3 330 aa4.53□□□□□ -1.68
LRP6-203ENST00000538239 ARPC1AQ92747 370 aa4.53□□□□□ -1.68
LRP6-203ENST00000538239 OR5AC2Q9NZP5 309 aa4.53□□□□□ -1.68
LRP6-203ENST00000538239 VAX2Q9UIW0 290 aa4.53□□□□□ -1.68
LRP6-203ENST00000538239 IGHV3OR16-8A0A075B7F1 116 aa4.53□□□□□ -1.68
LRP6-203ENST00000538239 PDE6DO43924 150 aa4.53□□□□□ -1.68
LRP6-203ENST00000538239 PRSS1P07477 247 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms