RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 SSTR5P35346 364 aa13.42□□□□□ -0.26
MCF2L-232ENST00000535094 ZNF585BQ52M93 769 aa13.42□□□□□ -0.26
MCF2L-232ENST00000535094 SIGLECL1Q8N7X8 197 aa13.42□□□□□ -0.26
MCF2L-232ENST00000535094 ACY3Q96HD9 319 aa13.42□□□□□ -0.26
MCF2L-232ENST00000535094 NPCDR1Q9BY65 106 aa13.42□□□□□ -0.26
MCF2L-232ENST00000535094 HIPK2Q9H2X6 1198 aa13.42□□□□□ -0.26
MCF2L-232ENST00000535094 NAT8BQ9UHF3 227 aa13.42□□□□□ -0.26
MCF2L-232ENST00000535094 FAM90A10PA6NDY2 464 aa13.42□□□□□ -0.26
MCF2L-232ENST00000535094 FAM90A18PA6NE21 464 aa13.42□□□□□ -0.26
MCF2L-232ENST00000535094 FAM90A16PA6NEW6 464 aa13.42□□□□□ -0.26
MCF2L-232ENST00000535094 FAM90A20PA6NIJ5 464 aa13.42□□□□□ -0.26
MCF2L-232ENST00000535094 FAM90A8PA6NJQ4 464 aa13.42□□□□□ -0.26
MCF2L-232ENST00000535094 FAM90A7PA6NKC0 464 aa13.42□□□□□ -0.26
MCF2L-232ENST00000535094 FAM90A22PA8MWA6 464 aa13.42□□□□□ -0.26
MCF2L-232ENST00000535094 FAM90A12PA8MX19 464 aa13.42□□□□□ -0.26
MCF2L-232ENST00000535094 FAM90A5PA8MXJ8 464 aa13.42□□□□□ -0.26
MCF2L-232ENST00000535094 FAM90A23PA8MXZ1 464 aa13.42□□□□□ -0.26
MCF2L-232ENST00000535094 FAM90A15PP0C7V4 464 aa13.42□□□□□ -0.26
MCF2L-232ENST00000535094 FAM90A13PP0C7W8 464 aa13.42□□□□□ -0.26
MCF2L-232ENST00000535094 FAM90A14PP0C7W9 464 aa13.42□□□□□ -0.26
MCF2L-232ENST00000535094 FAM90A24PP0C7X0 464 aa13.42□□□□□ -0.26
MCF2L-232ENST00000535094 SAP25Q8TEE9 199 aa13.42□□□□□ -0.26
MCF2L-232ENST00000535094 TMEM170AQ8WVE7 144 aa13.42□□□□□ -0.26
MCF2L-232ENST00000535094 LSM10Q969L4 123 aaKnown RBP13.42□□□□□ -0.26
MCF2L-232ENST00000535094 MPC1Q9Y5U8 109 aa13.42□□□□□ -0.26
MCF2L-232ENST00000535094 TMEM250H0YL14 139 aa13.41□□□□□ -0.26
MCF2L-232ENST00000535094 HAND1O96004 215 aa13.41□□□□□ -0.26
MCF2L-232ENST00000535094 RPL30P62888 115 aaKnown RBP13.41□□□□□ -0.26
MCF2L-232ENST00000535094 TMEM242Q9NWH2 141 aa13.41□□□□□ -0.26
MCF2L-232ENST00000535094 FREM2Q5SZK8 3169 aa13.41□□□□□ -0.26
MCF2L-232ENST00000535094 LRP4O75096 1905 aa13.41□□□□□ -0.26
MCF2L-232ENST00000535094 TMEM30CPA0ZSE6 113 aa13.41□□□□□ -0.26
MCF2L-232ENST00000535094 HBZP02008 142 aa13.41□□□□□ -0.26
MCF2L-232ENST00000535094 TFPI2P48307 235 aa13.41□□□□□ -0.26
MCF2L-232ENST00000535094 TPPP2P59282 170 aa13.41□□□□□ -0.26
MCF2L-232ENST00000535094 OR1C1Q15619 314 aa13.41□□□□□ -0.26
MCF2L-232ENST00000535094 PCED1AQ9H1Q7 454 aa13.41□□□□□ -0.26
MCF2L-232ENST00000535094 WDFY3Q8IZQ1 3526 aa13.41□□□□□ -0.26
MCF2L-232ENST00000535094 SNURFLB1AK76 121 aa13.41□□□□□ -0.26
MCF2L-232ENST00000535094 OR7C2O60412 319 aa13.41□□□□□ -0.26
MCF2L-232ENST00000535094 CELA3BP08861 270 aa13.41□□□□□ -0.26
MCF2L-232ENST00000535094 ARL14EPLP0DKL9 152 aa13.41□□□□□ -0.26
MCF2L-232ENST00000535094 ZFP36L1Q07352 338 aaKnown RBP13.41□□□□□ -0.26
MCF2L-232ENST00000535094 TDHQ8IZJ6 230 aa13.41□□□□□ -0.26
MCF2L-232ENST00000535094 ABHD12Q8N2K0 398 aa13.41□□□□□ -0.26
MCF2L-232ENST00000535094 CISD2Q8N5K1 135 aaKnown RBP13.41□□□□□ -0.26
MCF2L-232ENST00000535094 SNHG12Q9BXW3 62 aa13.41□□□□□ -0.26
MCF2L-232ENST00000535094 LRRC30A6NM36 301 aa13.4□□□□□ -0.26
MCF2L-232ENST00000535094 CD1BP29016 333 aa13.4□□□□□ -0.26
MCF2L-232ENST00000535094 OR10J1P30954 320 aa13.4□□□□□ -0.26
MCF2L-232ENST00000535094 CIB3Q96Q77 187 aaPredicted RBP13.4□□□□□ -0.26
MCF2L-232ENST00000535094 C11orf1Q9H5F2 150 aa13.4□□□□□ -0.26
MCF2L-232ENST00000535094 DNPH1O43598 174 aa13.4□□□□□ -0.26
MCF2L-232ENST00000535094 AMTP48728 403 aa13.4□□□□□ -0.26
MCF2L-232ENST00000535094 B3GALT5-AS1P59052 145 aa13.4□□□□□ -0.26
MCF2L-232ENST00000535094 MRPL54Q6P161 138 aaKnown RBP13.4□□□□□ -0.26
MCF2L-232ENST00000535094 R3HDM4Q96D70 268 aa13.4□□□□□ -0.26
MCF2L-232ENST00000535094 SEMA5BQ9P283 1151 aa13.4□□□□□ -0.26
MCF2L-232ENST00000535094 LOXL2Q9Y4K0 774 aa13.4□□□□□ -0.26
MCF2L-232ENST00000535094 PLCE1Q9P212 2302 aa13.4□□□□□ -0.26
MCF2L-232ENST00000535094 WNK2Q9Y3S1 2297 aa13.4□□□□□ -0.26
MCF2L-232ENST00000535094 HPRT1P00492 218 aa13.4□□□□□ -0.27
MCF2L-232ENST00000535094 LMO1P25800 156 aa13.4□□□□□ -0.27
MCF2L-232ENST00000535094 C6orf15Q6UXA7 325 aaPredicted RBP13.4□□□□□ -0.27
MCF2L-232ENST00000535094 RPH3ALQ9UNE2 315 aa13.4□□□□□ -0.27
MCF2L-232ENST00000535094 SCO2A0A1W2PP80 73 aa13.39□□□□□ -0.27
MCF2L-232ENST00000535094 AGFG2O95081 481 aa13.39□□□□□ -0.27
MCF2L-232ENST00000535094 NUTF2P61970 127 aaKnown RBP13.39□□□□□ -0.27
MCF2L-232ENST00000535094 PRR31Q5SQ13 230 aa13.39□□□□□ -0.27
MCF2L-232ENST00000535094 ATOH7Q8N100 152 aa13.39□□□□□ -0.27
MCF2L-232ENST00000535094 SLC25A40Q8TBP6 338 aa13.39□□□□□ -0.27
MCF2L-232ENST00000535094 CT55Q8WUE5 264 aa13.39□□□□□ -0.27
MCF2L-232ENST00000535094 MED13LQ71F56 2210 aa13.39□□□□□ -0.27
MCF2L-232ENST00000535094 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.39□□□□□ -0.27
MCF2L-232ENST00000535094 FXYD3Q14802 87 aa13.39□□□□□ -0.27
MCF2L-232ENST00000535094 DEFB108BQ8NET1 73 aa13.39□□□□□ -0.27
MCF2L-232ENST00000535094 OR4P4Q8NGL7 312 aa13.39□□□□□ -0.27
MCF2L-232ENST00000535094 LEAP2Q969E1 77 aa13.39□□□□□ -0.27
MCF2L-232ENST00000535094 B4E171 279 aa13.39□□□□□ -0.27
MCF2L-232ENST00000535094 C12orf77C9JDV5 145 aa13.39□□□□□ -0.27
MCF2L-232ENST00000535094 SPINT2O43291 252 aa13.39□□□□□ -0.27
MCF2L-232ENST00000535094 TSPAN7P41732 249 aa13.39□□□□□ -0.27
MCF2L-232ENST00000535094 OR1L6Q8NGR2 347 aa13.39□□□□□ -0.27
MCF2L-232ENST00000535094 C2orf88Q9BSF0 95 aa13.39□□□□□ -0.27
MCF2L-232ENST00000535094 QTRT1Q9BXR0 403 aaKnown RBP13.39□□□□□ -0.27
MCF2L-232ENST00000535094 GOLT1BQ9Y3E0 138 aa13.39□□□□□ -0.27
MCF2L-232ENST00000535094 RAB31Q13636 194 aa13.38□□□□□ -0.27
MCF2L-232ENST00000535094 MOB1BQ7L9L4 216 aa13.38□□□□□ -0.27
MCF2L-232ENST00000535094 MRPL37Q9BZE1 423 aaKnown RBP13.38□□□□□ -0.27
MCF2L-232ENST00000535094 ADMP35318 185 aa13.38□□□□□ -0.27
MCF2L-232ENST00000535094 ATP6V1FQ16864 119 aa13.38□□□□□ -0.27
MCF2L-232ENST00000535094 HES3Q5TGS1 186 aa13.38□□□□□ -0.27
MCF2L-232ENST00000535094 PPP1R32Q7Z5V6 425 aa13.38□□□□□ -0.27
MCF2L-232ENST00000535094 OR2M7Q8NG81 312 aa13.38□□□□□ -0.27
MCF2L-232ENST00000535094 RPL19P84098 196 aaKnown RBP13.37□□□□□ -0.27
MCF2L-232ENST00000535094 PRR27Q6MZM9 219 aa13.37□□□□□ -0.27
MCF2L-232ENST00000535094 ZNF295-AS1Q8N0V1 137 aa13.37□□□□□ -0.27
MCF2L-232ENST00000535094 OR8I2Q8N0Y5 310 aa13.37□□□□□ -0.27
MCF2L-232ENST00000535094 OR5AU1Q8NGC0 362 aa13.37□□□□□ -0.27
MCF2L-232ENST00000535094 WDYHV1Q96HA8 205 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms