RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 PLPP1O14494 284 aa2.55□□□□□ -2
USP48-215ENST00000534705 ARPC5O15511 151 aa2.55□□□□□ -2
USP48-215ENST00000534705 ERI3O43414 337 aaKnown RBP2.55□□□□□ -2
USP48-215ENST00000534705 OR10H3O60404 316 aa2.55□□□□□ -2
USP48-215ENST00000534705 NDUFB6O95139 128 aa2.55□□□□□ -2
USP48-215ENST00000534705 CA1P00915 261 aaPredicted RBP2.55□□□□□ -2
USP48-215ENST00000534705 CLPSP04118 112 aa2.55□□□□□ -2
USP48-215ENST00000534705 THY1P04216 161 aa2.55□□□□□ -2
USP48-215ENST00000534705 SERPINA7P05543 415 aa2.55□□□□□ -2
USP48-215ENST00000534705 BCHEP06276 602 aa2.55□□□□□ -2
USP48-215ENST00000534705 EIF4EP06730 217 aaKnown RBP2.55□□□□□ -2
USP48-215ENST00000534705 CD14P08571 375 aa2.55□□□□□ -2
USP48-215ENST00000534705 LIMS3P0CW19 117 aa2.55□□□□□ -2
USP48-215ENST00000534705 LIMS4P0CW20 117 aa2.55□□□□□ -2
USP48-215ENST00000534705 GZMBP10144 247 aa2.55□□□□□ -2
USP48-215ENST00000534705 ZNF25P17030 456 aaPredicted RBP2.55□□□□□ -2
USP48-215ENST00000534705 FGF7P21781 194 aa2.55□□□□□ -2
USP48-215ENST00000534705 HTR2CP28335 458 aa2.55□□□□□ -2
USP48-215ENST00000534705 AGTR1P30556 359 aa2.55□□□□□ -2
USP48-215ENST00000534705 IL2RGP31785 369 aa2.55□□□□□ -2
USP48-215ENST00000534705 ARR3P36575 388 aa2.55□□□□□ -2
USP48-215ENST00000534705 NPBWR2P48146 333 aa2.55□□□□□ -2
USP48-215ENST00000534705 CX3CR1P49238 355 aa2.55□□□□□ -2
USP48-215ENST00000534705 CRISP1P54107 249 aa2.55□□□□□ -2
USP48-215ENST00000534705 LIM2P55344 173 aa2.55□□□□□ -2
USP48-215ENST00000534705 CLDN12P56749 244 aa2.55□□□□□ -2
USP48-215ENST00000534705 KLF3P57682 345 aaPredicted RBP2.55□□□□□ -2
USP48-215ENST00000534705 RAB38P57729 211 aa2.55□□□□□ -2
USP48-215ENST00000534705 OR2B8PP59922 312 aa2.55□□□□□ -2
USP48-215ENST00000534705 CDC42P60953 191 aa2.55□□□□□ -2
USP48-215ENST00000534705 STXBP1P61764 594 aaKnown RBP2.55□□□□□ -2
USP48-215ENST00000534705 RPS25P62851 125 aaKnown RBP2.55□□□□□ -2
USP48-215ENST00000534705 EIF5AP63241 154 aaKnown RBP2.55□□□□□ -2
USP48-215ENST00000534705 ABCA4P78363 2273 aa2.55□□□□□ -2
USP48-215ENST00000534705 BTN3A2P78410 334 aa2.55□□□□□ -2
USP48-215ENST00000534705 CDK6Q00534 326 aa2.55□□□□□ -2
USP48-215ENST00000534705 IRF8Q02556 426 aa2.55□□□□□ -2
USP48-215ENST00000534705 AKAP6Q13023 2319 aa2.55□□□□□ -2
USP48-215ENST00000534705 ABRAXAS2Q15018 415 aa2.55□□□□□ -2
USP48-215ENST00000534705 PTGES3Q15185 160 aaKnown RBP2.55□□□□□ -2
USP48-215ENST00000534705 TMEM241Q24JQ0 296 aa2.55□□□□□ -2
USP48-215ENST00000534705 SLC22A6Q4U2R8 563 aa2.55□□□□□ -2
USP48-215ENST00000534705 ATP6AP1LQ52LC2 224 aa2.55□□□□□ -2
USP48-215ENST00000534705 KHDC3LQ587J8 217 aa2.55□□□□□ -2
USP48-215ENST00000534705 DMRTC1Q5HYR2 192 aa2.55□□□□□ -2
USP48-215ENST00000534705 IDNKQ5T6J7 187 aa2.55□□□□□ -2
USP48-215ENST00000534705 HIST2H3PS2Q5TEC6 136 aa2.55□□□□□ -2
USP48-215ENST00000534705 KHDRBS2Q5VWX1 349 aaKnown RBP2.55□□□□□ -2
USP48-215ENST00000534705 ZNF57Q68EA5 555 aaPredicted RBP2.55□□□□□ -2
USP48-215ENST00000534705 UNQ9370/PRO34162Q6UXP9 181 aa2.55□□□□□ -2
USP48-215ENST00000534705 C19orf35Q6ZS72 473 aa2.55□□□□□ -2
USP48-215ENST00000534705 MRPL21Q7Z2W9 205 aaKnown RBP2.55□□□□□ -2
USP48-215ENST00000534705 LINC01551Q86U37 167 aa2.55□□□□□ -2
USP48-215ENST00000534705 APRG1Q8IVJ8 170 aa2.55□□□□□ -2
USP48-215ENST00000534705 BAP18Q8IXM2 172 aa2.55□□□□□ -2
USP48-215ENST00000534705 C11orf53Q8IXP5 236 aa2.55□□□□□ -2
USP48-215ENST00000534705 MTURNQ8N3F0 131 aa2.55□□□□□ -2
USP48-215ENST00000534705 ZNF283Q8N7M2 679 aa2.55□□□□□ -2
USP48-215ENST00000534705 C8orf31Q8N9H6 132 aa2.55□□□□□ -2
USP48-215ENST00000534705 ACOT4Q8N9L9 421 aa2.55□□□□□ -2
USP48-215ENST00000534705 ZNRF1Q8ND25 227 aa2.55□□□□□ -2
USP48-215ENST00000534705 MDS2Q8NDY4 140 aa2.55□□□□□ -2
USP48-215ENST00000534705 OR4F17Q8NGA8 305 aa2.55□□□□□ -2
USP48-215ENST00000534705 OR10AD1Q8NGE0 317 aa2.55□□□□□ -2
USP48-215ENST00000534705 OR52I1Q8NGK6 324 aa2.55□□□□□ -2
USP48-215ENST00000534705 OR9Q1Q8NGQ5 310 aa2.55□□□□□ -2
USP48-215ENST00000534705 OR1K1Q8NGR3 316 aa2.55□□□□□ -2
USP48-215ENST00000534705 OR4F5Q8NH21 305 aa2.55□□□□□ -2
USP48-215ENST00000534705 OR5W2Q8NH69 310 aa2.55□□□□□ -2
USP48-215ENST00000534705 NEK7Q8TDX7 302 aa2.55□□□□□ -2
USP48-215ENST00000534705 ZNF721Q8TF20 911 aa2.55□□□□□ -2
USP48-215ENST00000534705 MRGPRFQ96AM1 343 aa2.55□□□□□ -2
USP48-215ENST00000534705 NTNG2Q96CW9 530 aa2.55□□□□□ -2
USP48-215ENST00000534705 CMBLQ96DG6 245 aa2.55□□□□□ -2
USP48-215ENST00000534705 SIGLEC12Q96PQ1 595 aa2.55□□□□□ -2
USP48-215ENST00000534705 OR4F4Q96R69 305 aa2.55□□□□□ -2
USP48-215ENST00000534705 PRRT1Q99946 306 aa2.55□□□□□ -2
USP48-215ENST00000534705 SLC35A5Q9BS91 424 aa2.55□□□□□ -2
USP48-215ENST00000534705 HES7Q9BYE0 225 aa2.55□□□□□ -2
USP48-215ENST00000534705 POLR2J2Q9GZM3 115 aaKnown RBP2.55□□□□□ -2
USP48-215ENST00000534705 ARL6Q9H0F7 186 aa2.55□□□□□ -2
USP48-215ENST00000534705 SYT4Q9H2B2 425 aa2.55□□□□□ -2
USP48-215ENST00000534705 LIME1Q9H400 295 aa2.55□□□□□ -2
USP48-215ENST00000534705 REEP1Q9H902 201 aa2.55□□□□□ -2
USP48-215ENST00000534705 HRASLSQ9HDD0 168 aa2.55□□□□□ -2
USP48-215ENST00000534705 AMBNQ9NP70 447 aa2.55□□□□□ -2
USP48-215ENST00000534705 CYTL1Q9NRR1 136 aa2.55□□□□□ -2
USP48-215ENST00000534705 ACER3Q9NUN7 267 aa2.55□□□□□ -2
USP48-215ENST00000534705 ASF1BQ9NVP2 202 aa2.55□□□□□ -2
USP48-215ENST00000534705 CLN6Q9NWW5 311 aa2.55□□□□□ -2
USP48-215ENST00000534705 UNC79Q9P2D8 2635 aa2.55□□□□□ -2
USP48-215ENST00000534705 PRODH2Q9UF12 536 aa2.55□□□□□ -2
USP48-215ENST00000534705 VSIG4Q9Y279 399 aa2.55□□□□□ -2
USP48-215ENST00000534705 ZFP30Q9Y2G7 519 aa2.55□□□□□ -2
USP48-215ENST00000534705 RPL36Q9Y3U8 105 aaKnown RBP2.55□□□□□ -2
USP48-215ENST00000534705 V9GYQ6 96 aa2.55□□□□□ -2
USP48-215ENST00000534705 TEX15Q9BXT5 2789 aa2.55□□□□□ -2
USP48-215ENST00000534705 ABCA12Q86UK0 2595 aa2.55□□□□□ -2
USP48-215ENST00000534705 ALPK2Q86TB3 2170 aa2.54□□□□□ -2
USP48-215ENST00000534705 CELSR1Q9NYQ6 3014 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms