RNA–Protein interactions for RNA: ENST00000532881.5

SSH3-210, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 1 (best)

Gene SSH3, Length 2,587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-210ENST00000532881 RAB24Q969Q5 203 aa12.39□□□□□ -0.43
SSH3-210ENST00000532881 CXXC4Q9H2H0 198 aa12.39□□□□□ -0.43
SSH3-210ENST00000532881 OTOGLQ3ZCN5 2332 aa12.39□□□□□ -0.43
SSH3-210ENST00000532881 PIEZO2Q9H5I5 2752 aa12.39□□□□□ -0.43
SSH3-210ENST00000532881 SMCO3A2RU48 225 aa12.39□□□□□ -0.43
SSH3-210ENST00000532881 PGPEP1LA6NFU8 196 aa12.39□□□□□ -0.43
SSH3-210ENST00000532881 CLDN34H7C241 214 aa12.39□□□□□ -0.43
SSH3-210ENST00000532881 CYB5R3P00387 301 aaPredicted RBP12.39□□□□□ -0.43
SSH3-210ENST00000532881 FABP4P15090 132 aa12.39□□□□□ -0.43
SSH3-210ENST00000532881 GZMHP20718 246 aa12.39□□□□□ -0.43
SSH3-210ENST00000532881 ZNF83P51522 516 aa12.39□□□□□ -0.43
SSH3-210ENST00000532881 FAM209BQ5JX69 171 aa12.39□□□□□ -0.43
SSH3-210ENST00000532881 OR10P1Q8NGE3 313 aa12.39□□□□□ -0.43
SSH3-210ENST00000532881 TAAR6Q96RI8 345 aa12.39□□□□□ -0.43
SSH3-210ENST00000532881 NPCDR1Q9BY65 106 aa12.39□□□□□ -0.43
SSH3-210ENST00000532881 PATZ1Q9HBE1 687 aaKnown RBP12.39□□□□□ -0.43
SSH3-210ENST00000532881 TET2Q6N021 2002 aaPredicted RBP12.39□□□□□ -0.43
SSH3-210ENST00000532881 IGHV2OR16-5A0A0B4J2B6 119 aa12.38□□□□□ -0.43
SSH3-210ENST00000532881 RNF212BA8MTL3 300 aa12.38□□□□□ -0.43
SSH3-210ENST00000532881 WNT2P09544 360 aa12.38□□□□□ -0.43
SSH3-210ENST00000532881 MYOD1P15172 320 aa12.38□□□□□ -0.43
SSH3-210ENST00000532881 EDDM3BP56851 147 aa12.38□□□□□ -0.43
SSH3-210ENST00000532881 SDSLQ96GA7 329 aa12.38□□□□□ -0.43
SSH3-210ENST00000532881 MEGF10Q96KG7 1140 aa12.38□□□□□ -0.43
SSH3-210ENST00000532881 OR51M1Q9H341 326 aa12.38□□□□□ -0.43
SSH3-210ENST00000532881 RYDENQ9NUL5 291 aaKnown RBP12.38□□□□□ -0.43
SSH3-210ENST00000532881 PTPRBP23467 1997 aa12.38□□□□□ -0.43
SSH3-210ENST00000532881 TACC2O95359 2948 aa12.38□□□□□ -0.43
SSH3-210ENST00000532881 PLCE1Q9P212 2302 aa12.38□□□□□ -0.43
SSH3-210ENST00000532881 IGKV1D-17A0A075B6S4 117 aa12.38□□□□□ -0.43
SSH3-210ENST00000532881 TMEM210A6NLX4 147 aa12.38□□□□□ -0.43
SSH3-210ENST00000532881 SLC31A2O15432 143 aa12.38□□□□□ -0.43
SSH3-210ENST00000532881 NPPCP23582 126 aa12.38□□□□□ -0.43
SSH3-210ENST00000532881 GCH1P30793 250 aa12.38□□□□□ -0.43
SSH3-210ENST00000532881 PRDX2P32119 198 aa12.38□□□□□ -0.43
SSH3-210ENST00000532881 GUSBP1Q15486 140 aa12.38□□□□□ -0.43
SSH3-210ENST00000532881 DEFB109BQ30KR1 87 aa12.38□□□□□ -0.43
SSH3-210ENST00000532881 DERL1Q9BUN8 251 aa12.38□□□□□ -0.43
SSH3-210ENST00000532881 HIPK2Q9H2X6 1198 aa12.38□□□□□ -0.43
SSH3-210ENST00000532881 PARLQ9H300 379 aa12.38□□□□□ -0.43
SSH3-210ENST00000532881 SIRT7Q9NRC8 400 aa12.38□□□□□ -0.43
SSH3-210ENST00000532881 GNG12Q9UBI6 72 aa12.38□□□□□ -0.43
SSH3-210ENST00000532881 DKK4Q9UBT3 224 aa12.38□□□□□ -0.43
SSH3-210ENST00000532881 GAB2Q9UQC2 676 aa12.38□□□□□ -0.43
SSH3-210ENST00000532881 C15orf65H3BRN8 121 aa12.37□□□□□ -0.43
SSH3-210ENST00000532881 IGHV2-70P01814 119 aa12.37□□□□□ -0.43
SSH3-210ENST00000532881 NKX6-1P78426 367 aaPredicted RBP12.37□□□□□ -0.43
SSH3-210ENST00000532881 CATR1Q13166 79 aa12.37□□□□□ -0.43
SSH3-210ENST00000532881 MSMO1Q15800 293 aa12.37□□□□□ -0.43
SSH3-210ENST00000532881 TGIF2LYQ8IUE0 185 aa12.37□□□□□ -0.43
SSH3-210ENST00000532881 ZNF383Q8NA42 475 aa12.37□□□□□ -0.43
SSH3-210ENST00000532881 R3HDM4Q96D70 268 aa12.37□□□□□ -0.43
SSH3-210ENST00000532881 GAR1Q9NY12 217 aaKnown RBP12.37□□□□□ -0.43
SSH3-210ENST00000532881 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.37□□□□□ -0.43
SSH3-210ENST00000532881 RRHO14718 337 aa12.37□□□□□ -0.43
SSH3-210ENST00000532881 LY86O95711 162 aa12.37□□□□□ -0.43
SSH3-210ENST00000532881 RPL23P62829 140 aaKnown RBP12.37□□□□□ -0.43
SSH3-210ENST00000532881 S100A12P80511 92 aa12.37□□□□□ -0.43
SSH3-210ENST00000532881 C22orf34Q6ZV56 151 aa12.37□□□□□ -0.43
SSH3-210ENST00000532881 SEM1Q6ZVN7 128 aa12.37□□□□□ -0.43
SSH3-210ENST00000532881 C1orf87Q8N0U7 546 aa12.37□□□□□ -0.43
SSH3-210ENST00000532881 ABHD12Q8N2K0 398 aa12.37□□□□□ -0.43
SSH3-210ENST00000532881 C15orf62A8K5M9 175 aa12.36□□□□□ -0.43
SSH3-210ENST00000532881 SPRY3O43610 288 aa12.36□□□□□ -0.43
SSH3-210ENST00000532881 TNFSF13O75888 250 aa12.36□□□□□ -0.43
SSH3-210ENST00000532881 CLDN14O95500 239 aa12.36□□□□□ -0.43
SSH3-210ENST00000532881 IGHG3P01860 377 aa12.36□□□□□ -0.43
SSH3-210ENST00000532881 S100PP25815 95 aa12.36□□□□□ -0.43
SSH3-210ENST00000532881 HIST3H2BBQ8N257 126 aa12.36□□□□□ -0.43
SSH3-210ENST00000532881 STARD4Q96DR4 205 aa12.36□□□□□ -0.43
SSH3-210ENST00000532881 TMEM147Q9BVK8 224 aa12.36□□□□□ -0.43
SSH3-210ENST00000532881 ZNRD1Q9P1U0 126 aa12.36□□□□□ -0.43
SSH3-210ENST00000532881 RIF1Q5UIP0 2472 aaKnown RBP12.36□□□□□ -0.43
SSH3-210ENST00000532881 CXorf65A6NEN9 183 aa12.36□□□□□ -0.43
SSH3-210ENST00000532881 M0R1X1 148 aa12.36□□□□□ -0.43
SSH3-210ENST00000532881 HNF1AP20823 631 aa12.36□□□□□ -0.43
SSH3-210ENST00000532881 Q8N7P7 452 aa12.36□□□□□ -0.43
SSH3-210ENST00000532881 PINX1Q96BK5 328 aaKnown RBP12.36□□□□□ -0.43
SSH3-210ENST00000532881 DSCAMO60469 2012 aa12.36□□□□□ -0.43
SSH3-210ENST00000532881 YLPM1P49750 1951 aaKnown RBP12.35□□□□□ -0.43
SSH3-210ENST00000532881 COX5AP20674 150 aa12.35□□□□□ -0.43
SSH3-210ENST00000532881 S100A2P29034 98 aa12.35□□□□□ -0.43
SSH3-210ENST00000532881 GPR12P47775 334 aa12.35□□□□□ -0.43
SSH3-210ENST00000532881 ATP5G3P48201 142 aa12.35□□□□□ -0.43
SSH3-210ENST00000532881 TMEM241Q24JQ0 296 aa12.35□□□□□ -0.43
SSH3-210ENST00000532881 ZNF718Q3SXZ3 478 aa12.35□□□□□ -0.43
SSH3-210ENST00000532881 MOGAT3Q86VF5 341 aa12.35□□□□□ -0.43
SSH3-210ENST00000532881 DEFB108BQ8NET1 73 aa12.35□□□□□ -0.43
SSH3-210ENST00000532881 SNRNP40Q96DI7 357 aaKnown RBP12.35□□□□□ -0.43
SSH3-210ENST00000532881 TCEAL7Q9BRU2 100 aa12.35□□□□□ -0.43
SSH3-210ENST00000532881 PCGF1Q9BSM1 259 aa12.35□□□□□ -0.43
SSH3-210ENST00000532881 LAMP3Q9UQV4 416 aa12.35□□□□□ -0.43
SSH3-210ENST00000532881 FAM90A26D6RGX4 464 aa12.35□□□□□ -0.43
SSH3-210ENST00000532881 IFNL4K9M1U5 179 aa12.35□□□□□ -0.43
SSH3-210ENST00000532881 M0R1B8 84 aa12.35□□□□□ -0.43
SSH3-210ENST00000532881 PHOX2AO14813 284 aa12.35□□□□□ -0.43
SSH3-210ENST00000532881 PPP1R2P9O14990 202 aa12.35□□□□□ -0.43
SSH3-210ENST00000532881 OPN1MWP04001 364 aa12.35□□□□□ -0.43
SSH3-210ENST00000532881 OPN1MW2P0DN77 364 aa12.35□□□□□ -0.43
SSH3-210ENST00000532881 OPN1MW3P0DN78 364 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms