RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 ZNF324O75467 553 aaPredicted RBP6.94□□□□□ -1.3
CTNND1-220ENST00000529526 MEF2BQ02080 365 aaPredicted RBP6.94□□□□□ -1.3
CTNND1-220ENST00000529526 RPL39P5Q59GN2 51 aa6.94□□□□□ -1.3
CTNND1-220ENST00000529526 UNQ9370/PRO34162Q6UXP9 181 aa6.94□□□□□ -1.3
CTNND1-220ENST00000529526 TIMP4Q99727 224 aa6.94□□□□□ -1.3
CTNND1-220ENST00000529526 IGHV3-35A0A0C4DH35 117 aa6.94□□□□□ -1.3
CTNND1-220ENST00000529526 A0A1W2PR77 199 aa6.94□□□□□ -1.3
CTNND1-220ENST00000529526 FAM90A10PA6NDY2 464 aa6.94□□□□□ -1.3
CTNND1-220ENST00000529526 FAM90A18PA6NE21 464 aa6.94□□□□□ -1.3
CTNND1-220ENST00000529526 FAM90A16PA6NEW6 464 aa6.94□□□□□ -1.3
CTNND1-220ENST00000529526 FAM90A20PA6NIJ5 464 aa6.94□□□□□ -1.3
CTNND1-220ENST00000529526 FAM90A8PA6NJQ4 464 aa6.94□□□□□ -1.3
CTNND1-220ENST00000529526 FAM90A7PA6NKC0 464 aa6.94□□□□□ -1.3
CTNND1-220ENST00000529526 FAM90A22PA8MWA6 464 aa6.94□□□□□ -1.3
CTNND1-220ENST00000529526 FAM90A12PA8MX19 464 aa6.94□□□□□ -1.3
CTNND1-220ENST00000529526 FAM90A5PA8MXJ8 464 aa6.94□□□□□ -1.3
CTNND1-220ENST00000529526 FAM90A23PA8MXZ1 464 aa6.94□□□□□ -1.3
CTNND1-220ENST00000529526 FAM90A15PP0C7V4 464 aa6.94□□□□□ -1.3
CTNND1-220ENST00000529526 FAM90A13PP0C7W8 464 aa6.94□□□□□ -1.3
CTNND1-220ENST00000529526 FAM90A14PP0C7W9 464 aa6.94□□□□□ -1.3
CTNND1-220ENST00000529526 FAM90A24PP0C7X0 464 aa6.94□□□□□ -1.3
CTNND1-220ENST00000529526 CKS2P33552 79 aa6.94□□□□□ -1.3
CTNND1-220ENST00000529526 SMUG1Q53HV7 270 aa6.94□□□□□ -1.3
CTNND1-220ENST00000529526 MMD2Q8IY49 270 aa6.94□□□□□ -1.3
CTNND1-220ENST00000529526 FDCSPQ8NFU4 85 aa6.94□□□□□ -1.3
CTNND1-220ENST00000529526 WFIKKN1Q96NZ8 548 aa6.94□□□□□ -1.3
CTNND1-220ENST00000529526 IGKV1D-43A0A0B4J1Z2 117 aa6.94□□□□□ -1.3
CTNND1-220ENST00000529526 A0A0G2JMM0 328 aa6.94□□□□□ -1.3
CTNND1-220ENST00000529526 A0A1W2PPB8 328 aa6.94□□□□□ -1.3
CTNND1-220ENST00000529526 A0A1W2PRS3 328 aa6.94□□□□□ -1.3
CTNND1-220ENST00000529526 A8MWL6 223 aa6.94□□□□□ -1.3
CTNND1-220ENST00000529526 KIR3DP1A8MWS1 328 aa6.94□□□□□ -1.3
CTNND1-220ENST00000529526 RECKO95980 971 aa6.94□□□□□ -1.3
CTNND1-220ENST00000529526 CA2P00918 260 aa6.94□□□□□ -1.3
CTNND1-220ENST00000529526 ACSF3Q4G176 576 aaPredicted RBP6.94□□□□□ -1.3
CTNND1-220ENST00000529526 SPATA45Q537H7 98 aa6.94□□□□□ -1.3
CTNND1-220ENST00000529526 PNKDQ8N490 385 aa6.94□□□□□ -1.3
CTNND1-220ENST00000529526 ZNRF1Q8ND25 227 aa6.94□□□□□ -1.3
CTNND1-220ENST00000529526 OR4B1Q8NGF8 309 aa6.94□□□□□ -1.3
CTNND1-220ENST00000529526 OR5P3Q8WZ94 311 aa6.94□□□□□ -1.3
CTNND1-220ENST00000529526 SCARF2Q96GP6 870 aaPredicted RBP6.94□□□□□ -1.3
CTNND1-220ENST00000529526 TP53RKQ96S44 253 aa6.94□□□□□ -1.3
CTNND1-220ENST00000529526 MRPL18Q9H0U6 180 aaKnown RBP6.94□□□□□ -1.3
CTNND1-220ENST00000529526 PTPRFP10586 1907 aa6.94□□□□□ -1.3
CTNND1-220ENST00000529526 FBLL1A6NHQ2 334 aaKnown RBP6.94□□□□□ -1.3
CTNND1-220ENST00000529526 ERVH48-1M5A8F1 160 aa6.94□□□□□ -1.3
CTNND1-220ENST00000529526 UBE2L6O14933 153 aa6.94□□□□□ -1.3
CTNND1-220ENST00000529526 CRYBB3P26998 211 aa6.94□□□□□ -1.3
CTNND1-220ENST00000529526 COMPP49747 757 aaPredicted RBP6.94□□□□□ -1.3
CTNND1-220ENST00000529526 IGLV3-21P80748 117 aaPredicted RBP6.94□□□□□ -1.3
CTNND1-220ENST00000529526 TMEM177Q53S58 311 aa6.94□□□□□ -1.3
CTNND1-220ENST00000529526 C1QL2Q7Z5L3 287 aa6.94□□□□□ -1.3
CTNND1-220ENST00000529526 RNF115Q9Y4L5 304 aa6.94□□□□□ -1.3
CTNND1-220ENST00000529526 PARP14Q460N5 1801 aa6.94□□□□□ -1.3
CTNND1-220ENST00000529526 LOC105371242A0A075B767 164 aa6.94□□□□□ -1.3
CTNND1-220ENST00000529526 IGHV1-69-2A0A0G2JMI3 117 aa6.94□□□□□ -1.3
CTNND1-220ENST00000529526 MPDU1O75352 247 aa6.94□□□□□ -1.3
CTNND1-220ENST00000529526 PPP1R32Q7Z5V6 425 aa6.94□□□□□ -1.3
CTNND1-220ENST00000529526 AQP10Q96PS8 301 aa6.94□□□□□ -1.3
CTNND1-220ENST00000529526 ATG101Q9BSB4 218 aa6.94□□□□□ -1.3
CTNND1-220ENST00000529526 AMY1AP04745 511 aa6.93□□□□□ -1.3
CTNND1-220ENST00000529526 CSRP3P50461 194 aa6.93□□□□□ -1.3
CTNND1-220ENST00000529526 RRN3P1Q2M238 152 aa6.93□□□□□ -1.3
CTNND1-220ENST00000529526 ABLIM2Q6H8Q1 611 aa6.93□□□□□ -1.3
CTNND1-220ENST00000529526 DRAM1Q8N682 238 aa6.93□□□□□ -1.3
CTNND1-220ENST00000529526 S4R3C0 116 aa6.93□□□□□ -1.3
CTNND1-220ENST00000529526 GDF9O60383 454 aa6.93□□□□□ -1.3
CTNND1-220ENST00000529526 MOSP00540 346 aa6.93□□□□□ -1.3
CTNND1-220ENST00000529526 MFAP4P55083 255 aa6.93□□□□□ -1.3
CTNND1-220ENST00000529526 RND3P61587 244 aa6.93□□□□□ -1.3
CTNND1-220ENST00000529526 FAM201AQ5SY85 155 aa6.93□□□□□ -1.3
CTNND1-220ENST00000529526 DNAJC4Q9NNZ3 241 aa6.93□□□□□ -1.3
CTNND1-220ENST00000529526 NPDC1Q9NQX5 325 aaPredicted RBP6.93□□□□□ -1.3
CTNND1-220ENST00000529526 JPT1Q9UK76 154 aa6.93□□□□□ -1.3
CTNND1-220ENST00000529526 TMEM56-RWDD3S4R434 201 aa6.93□□□□□ -1.3
CTNND1-220ENST00000529526 IGHV3-66A0A0C4DH42 116 aa6.93□□□□□ -1.3
CTNND1-220ENST00000529526 TGFBR3LH3BV60 316 aa6.93□□□□□ -1.3
CTNND1-220ENST00000529526 HSPE1P61604 102 aaKnown RBP6.93□□□□□ -1.3
CTNND1-220ENST00000529526 FAM53AQ6NSI3 398 aaPredicted RBP6.93□□□□□ -1.3
CTNND1-220ENST00000529526 SAXO1Q8IYX7 474 aa6.93□□□□□ -1.3
CTNND1-220ENST00000529526 OR51M1Q9H341 326 aa6.93□□□□□ -1.3
CTNND1-220ENST00000529526 TCF21O43680 179 aa6.93□□□□□ -1.3
CTNND1-220ENST00000529526 HINT1P49773 126 aaPredicted RBP6.93□□□□□ -1.3
CTNND1-220ENST00000529526 CX3CL1P78423 397 aa6.93□□□□□ -1.3
CTNND1-220ENST00000529526 ATP5G2Q06055 141 aa6.93□□□□□ -1.3
CTNND1-220ENST00000529526 ZNF273Q14593 569 aa6.93□□□□□ -1.3
CTNND1-220ENST00000529526 CCL19Q99731 98 aa6.93□□□□□ -1.3
CTNND1-220ENST00000529526 CHCHD2Q9Y6H1 151 aaPredicted RBP6.93□□□□□ -1.3
CTNND1-220ENST00000529526 TMEM14DPA8MWL7 114 aa6.93□□□□□ -1.3
CTNND1-220ENST00000529526 M0QZK8 103 aa6.93□□□□□ -1.3
CTNND1-220ENST00000529526 GGCTO75223 188 aaKnown RBP6.93□□□□□ -1.3
CTNND1-220ENST00000529526 NUDT3O95989 172 aa6.93□□□□□ -1.3
CTNND1-220ENST00000529526 ANOS1P23352 680 aa6.93□□□□□ -1.3
CTNND1-220ENST00000529526 KIAA1644Q3SXP7 199 aa6.93□□□□□ -1.3
CTNND1-220ENST00000529526 SYT8Q8NBV8 401 aa6.93□□□□□ -1.3
CTNND1-220ENST00000529526 IGHV3OR16-13A0A075B7E8 117 aa6.92□□□□□ -1.3
CTNND1-220ENST00000529526 IGHV3-74A0A0B4J1X5 117 aa6.92□□□□□ -1.3
CTNND1-220ENST00000529526 IGKV3-20P01619 116 aa6.92□□□□□ -1.3
CTNND1-220ENST00000529526 LHFPL5Q8TAF8 219 aa6.92□□□□□ -1.3
CTNND1-220ENST00000529526 SRSF12Q8WXF0 261 aaKnown RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms