RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 GSKIPQ9P0R6 139 aa3.99□□□□□ -1.77
PCF11-202ENST00000528336 SIGLEC7Q9Y286 467 aa3.99□□□□□ -1.77
PCF11-202ENST00000528336 CXorf51AA0A1B0GTR3 108 aa3.98□□□□□ -1.77
PCF11-202ENST00000528336 D6RAR5 112 aa3.98□□□□□ -1.77
PCF11-202ENST00000528336 FAAHO00519 579 aa3.98□□□□□ -1.77
PCF11-202ENST00000528336 MYL12BO14950 172 aa3.98□□□□□ -1.77
PCF11-202ENST00000528336 PSPHP1O15172 72 aa3.98□□□□□ -1.77
PCF11-202ENST00000528336 ORC5O43913 435 aa3.98□□□□□ -1.77
PCF11-202ENST00000528336 NDUFS5O43920 106 aa3.98□□□□□ -1.77
PCF11-202ENST00000528336 CST8O60676 142 aa3.98□□□□□ -1.77
PCF11-202ENST00000528336 RDH16O75452 317 aa3.98□□□□□ -1.77
PCF11-202ENST00000528336 CSF3P09919 207 aa3.98□□□□□ -1.77
PCF11-202ENST00000528336 OR10J4P0C629 311 aa3.98□□□□□ -1.77
PCF11-202ENST00000528336 OR8U8P0C7N1 319 aa3.98□□□□□ -1.77
PCF11-202ENST00000528336 SULT1A3P0DMM9 295 aa3.98□□□□□ -1.77
PCF11-202ENST00000528336 SULT1A4P0DMN0 295 aa3.98□□□□□ -1.77
PCF11-202ENST00000528336 IGHV3-43DP0DP04 118 aa3.98□□□□□ -1.77
PCF11-202ENST00000528336 CXCL2P19875 107 aa3.98□□□□□ -1.77
PCF11-202ENST00000528336 S100GP29377 79 aa3.98□□□□□ -1.77
PCF11-202ENST00000528336 ERP29P30040 261 aaKnown RBP3.98□□□□□ -1.77
PCF11-202ENST00000528336 DDTP30046 118 aa3.98□□□□□ -1.77
PCF11-202ENST00000528336 FMO3P31513 532 aa3.98□□□□□ -1.77
PCF11-202ENST00000528336 HSPE1P61604 102 aaKnown RBP3.98□□□□□ -1.77
PCF11-202ENST00000528336 RHOBP62745 196 aa3.98□□□□□ -1.77
PCF11-202ENST00000528336 RUNX1Q01196 453 aa3.98□□□□□ -1.77
PCF11-202ENST00000528336 GNA12Q03113 381 aa3.98□□□□□ -1.77
PCF11-202ENST00000528336 KIAA0087Q14695 138 aa3.98□□□□□ -1.77
PCF11-202ENST00000528336 IAH1Q2TAA2 248 aaPredicted RBP3.98□□□□□ -1.77
PCF11-202ENST00000528336 OR2B11Q5JQS5 317 aa3.98□□□□□ -1.77
PCF11-202ENST00000528336 TMEM236Q5W0B7 351 aa3.98□□□□□ -1.77
PCF11-202ENST00000528336 TOMM20LQ6UXN7 152 aa3.98□□□□□ -1.77
PCF11-202ENST00000528336 ZNF550Q7Z398 422 aa3.98□□□□□ -1.77
PCF11-202ENST00000528336 C6orf120Q7Z4R8 191 aa3.98□□□□□ -1.77
PCF11-202ENST00000528336 NAA40Q86UY6 237 aa3.98□□□□□ -1.77
PCF11-202ENST00000528336 TGIF2LYQ8IUE0 185 aa3.98□□□□□ -1.77
PCF11-202ENST00000528336 UMODL1-AS1Q8N2C9 162 aa3.98□□□□□ -1.77
PCF11-202ENST00000528336 TMEM105Q8N8V8 129 aa3.98□□□□□ -1.77
PCF11-202ENST00000528336 DCAF4L2Q8NA75 395 aa3.98□□□□□ -1.77
PCF11-202ENST00000528336 OR1N2Q8NGR9 330 aa3.98□□□□□ -1.77
PCF11-202ENST00000528336 OR2K2Q8NGT1 345 aa3.98□□□□□ -1.77
PCF11-202ENST00000528336 ZNRF2Q8NHG8 242 aa3.98□□□□□ -1.77
PCF11-202ENST00000528336 MFSD8Q8NHS3 518 aa3.98□□□□□ -1.77
PCF11-202ENST00000528336 RNASE11Q8TAA1 199 aaKnown RBP3.98□□□□□ -1.77
PCF11-202ENST00000528336 WFDC5Q8TCV5 224 aa3.98□□□□□ -1.77
PCF11-202ENST00000528336 LRRC29Q8WV35 223 aa3.98□□□□□ -1.77
PCF11-202ENST00000528336 BORCS7Q96B45 105 aa3.98□□□□□ -1.77
PCF11-202ENST00000528336 DCUN1D1Q96GG9 259 aa3.98□□□□□ -1.77
PCF11-202ENST00000528336 FCRL1Q96LA6 429 aa3.98□□□□□ -1.77
PCF11-202ENST00000528336 MARVELD1Q9BSK0 173 aa3.98□□□□□ -1.77
PCF11-202ENST00000528336 ABCG5Q9H222 651 aa3.98□□□□□ -1.77
PCF11-202ENST00000528336 SPNS1Q9H2V7 528 aa3.98□□□□□ -1.77
PCF11-202ENST00000528336 UTP11Q9Y3A2 253 aaKnown RBP3.98□□□□□ -1.77
PCF11-202ENST00000528336 TICRRQ7Z2Z1 1910 aa3.97□□□□□ -1.77
PCF11-202ENST00000528336 CACNA1HO95180 2353 aa3.97□□□□□ -1.77
PCF11-202ENST00000528336 A0A0D9SEW6 157 aa3.97□□□□□ -1.77
PCF11-202ENST00000528336 LINC00587B1AMM8 73 aa3.97□□□□□ -1.77
PCF11-202ENST00000528336 EEF1E1-BLOC1S5C9J1V9 151 aa3.97□□□□□ -1.77
PCF11-202ENST00000528336 UPK1AO00322 258 aa3.97□□□□□ -1.77
PCF11-202ENST00000528336 EEF1E1O43324 174 aaKnown RBP3.97□□□□□ -1.77
PCF11-202ENST00000528336 ZNF780AO75290 641 aaPredicted RBP3.97□□□□□ -1.77
PCF11-202ENST00000528336 CCNKO75909 580 aa3.97□□□□□ -1.77
PCF11-202ENST00000528336 YIF1AO95070 293 aa3.97□□□□□ -1.77
PCF11-202ENST00000528336 MT-CO2P00403 227 aa3.97□□□□□ -1.77
PCF11-202ENST00000528336 CA2P00918 260 aa3.97□□□□□ -1.77
PCF11-202ENST00000528336 TRBV12-3P01733 135 aa3.97□□□□□ -1.77
PCF11-202ENST00000528336 IGHV3-23P01764 117 aa3.97□□□□□ -1.77
PCF11-202ENST00000528336 PFN1P07737 140 aaKnown RBP3.97□□□□□ -1.77
PCF11-202ENST00000528336 SPNP16150 400 aa3.97□□□□□ -1.77
PCF11-202ENST00000528336 OMGP23515 440 aa3.97□□□□□ -1.77
PCF11-202ENST00000528336 KDELR1P24390 212 aa3.97□□□□□ -1.77
PCF11-202ENST00000528336 CD34P28906 385 aa3.97□□□□□ -1.77
PCF11-202ENST00000528336 CDKN2BP42772 138 aa3.97□□□□□ -1.77
PCF11-202ENST00000528336 MARCKSL1P49006 195 aa3.97□□□□□ -1.77
PCF11-202ENST00000528336 ZNF133P52736 654 aaPredicted RBP3.97□□□□□ -1.77
PCF11-202ENST00000528336 ZNF138P52744 262 aa3.97□□□□□ -1.77
PCF11-202ENST00000528336 PMAIP1Q13794 54 aa3.97□□□□□ -1.77
PCF11-202ENST00000528336 PAFAH1B3Q15102 231 aaKnown RBP3.97□□□□□ -1.77
PCF11-202ENST00000528336 PMVKQ15126 192 aa3.97□□□□□ -1.77
PCF11-202ENST00000528336 IRF4Q15306 451 aa3.97□□□□□ -1.77
PCF11-202ENST00000528336 RGNQ15493 299 aa3.97□□□□□ -1.77
PCF11-202ENST00000528336 Q499Y3 187 aa3.97□□□□□ -1.77
PCF11-202ENST00000528336 SPATA31B1PQ5VZV4 182 aa3.97□□□□□ -1.77
PCF11-202ENST00000528336 CLEC19AQ6UXS0 136 aa3.97□□□□□ -1.77
PCF11-202ENST00000528336 Q6ZS52 159 aa3.97□□□□□ -1.77
PCF11-202ENST00000528336 LRRC18Q8N456 261 aa3.97□□□□□ -1.77
PCF11-202ENST00000528336 UBL4BQ8N7F7 174 aa3.97□□□□□ -1.77
PCF11-202ENST00000528336 OR11H7Q8NGC8 314 aa3.97□□□□□ -1.77
PCF11-202ENST00000528336 OR1S1Q8NH92 325 aa3.97□□□□□ -1.77
PCF11-202ENST00000528336 ZNF420Q8TAQ5 688 aaPredicted RBP3.97□□□□□ -1.77
PCF11-202ENST00000528336 CD200R1Q8TD46 325 aa3.97□□□□□ -1.77
PCF11-202ENST00000528336 SKA2Q8WVK7 121 aaPredicted RBP3.97□□□□□ -1.77
PCF11-202ENST00000528336 RNF157Q96PX1 679 aa3.97□□□□□ -1.77
PCF11-202ENST00000528336 PRSS27Q9BQR3 290 aa3.97□□□□□ -1.77
PCF11-202ENST00000528336 MS4A8Q9BY19 250 aa3.97□□□□□ -1.77
PCF11-202ENST00000528336 GABARAPL3Q9BY60 117 aa3.97□□□□□ -1.77
PCF11-202ENST00000528336 SLC17A9Q9BYT1 436 aa3.97□□□□□ -1.77
PCF11-202ENST00000528336 OR51I2Q9H344 312 aa3.97□□□□□ -1.77
PCF11-202ENST00000528336 TMEM138Q9NPI0 162 aa3.97□□□□□ -1.77
PCF11-202ENST00000528336 MRPL27Q9P0M9 148 aaKnown RBP3.97□□□□□ -1.77
PCF11-202ENST00000528336 PYCARDQ9ULZ3 195 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms