RNA–Protein interactions for RNA: ENST00000524126.5

SPIDR-224, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 1 (best)

Gene SPIDR, Length 2,614 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-224ENST00000524126 HLA-BQ31612 363 aa8.6□□□□□ -1.03
SPIDR-224ENST00000524126 PLCXD3Q63HM9 321 aa8.6□□□□□ -1.03
SPIDR-224ENST00000524126 OSR2Q8N2R0 312 aa8.6□□□□□ -1.03
SPIDR-224ENST00000524126 OR4P4Q8NGL7 312 aa8.6□□□□□ -1.03
SPIDR-224ENST00000524126 OR2Y1Q8NGV0 311 aa8.6□□□□□ -1.03
SPIDR-224ENST00000524126 OR1L1Q8NH94 360 aa8.6□□□□□ -1.03
SPIDR-224ENST00000524126 MMABQ96EY8 250 aaPredicted RBP8.6□□□□□ -1.03
SPIDR-224ENST00000524126 MRPL13Q9BYD1 178 aaKnown RBP8.6□□□□□ -1.03
SPIDR-224ENST00000524126 ASXL3Q9C0F0 2248 aa8.59□□□□□ -1.03
SPIDR-224ENST00000524126 SAA2-SAA4A0A096LPE2 208 aa8.59□□□□□ -1.03
SPIDR-224ENST00000524126 TRAV38-1A0A0B4J264 116 aa8.59□□□□□ -1.03
SPIDR-224ENST00000524126 PIAS2O75928 621 aa8.59□□□□□ -1.03
SPIDR-224ENST00000524126 OR7C1O76099 320 aaPredicted RBP8.59□□□□□ -1.03
SPIDR-224ENST00000524126 SRD5A2P31213 254 aa8.59□□□□□ -1.03
SPIDR-224ENST00000524126 OTX1P32242 354 aaPredicted RBP8.59□□□□□ -1.03
SPIDR-224ENST00000524126 OR1D5P58170 312 aa8.59□□□□□ -1.03
SPIDR-224ENST00000524126 HTD2P86397 168 aa8.59□□□□□ -1.03
SPIDR-224ENST00000524126 PLCXD2Q0VAA5 305 aa8.59□□□□□ -1.03
SPIDR-224ENST00000524126 CFAP161Q6P656 301 aa8.59□□□□□ -1.03
SPIDR-224ENST00000524126 DEFB123Q8N688 67 aa8.59□□□□□ -1.03
SPIDR-224ENST00000524126 OR10P1Q8NGE3 313 aa8.59□□□□□ -1.03
SPIDR-224ENST00000524126 QTRT1Q9BXR0 403 aaKnown RBP8.59□□□□□ -1.03
SPIDR-224ENST00000524126 FRG2CA6NGY1 282 aa8.59□□□□□ -1.03
SPIDR-224ENST00000524126 H0YJW9 148 aa8.59□□□□□ -1.03
SPIDR-224ENST00000524126 PDCD6O75340 191 aa8.59□□□□□ -1.03
SPIDR-224ENST00000524126 SERPINE2P07093 398 aa8.59□□□□□ -1.03
SPIDR-224ENST00000524126 SSTR5P35346 364 aa8.59□□□□□ -1.03
SPIDR-224ENST00000524126 TCL1AP56279 114 aa8.59□□□□□ -1.03
SPIDR-224ENST00000524126 ARF6P62330 175 aa8.59□□□□□ -1.03
SPIDR-224ENST00000524126 MALLQ13021 153 aa8.59□□□□□ -1.03
SPIDR-224ENST00000524126 PMCHL1Q16048 86 aa8.59□□□□□ -1.03
SPIDR-224ENST00000524126 MMD2Q8IY49 270 aa8.59□□□□□ -1.03
SPIDR-224ENST00000524126 C5orf17Q8NAS9 161 aa8.59□□□□□ -1.03
SPIDR-224ENST00000524126 IL36GQ9NZH8 169 aa8.59□□□□□ -1.03
SPIDR-224ENST00000524126 IGKV1-6A0A0C4DH72 117 aa8.58□□□□□ -1.04
SPIDR-224ENST00000524126 hDV102S1A0JD36 115 aa8.58□□□□□ -1.04
SPIDR-224ENST00000524126 M0R1X1 148 aa8.58□□□□□ -1.04
SPIDR-224ENST00000524126 BMPR1BO00238 502 aa8.58□□□□□ -1.04
SPIDR-224ENST00000524126 PDE6DO43924 150 aa8.58□□□□□ -1.04
SPIDR-224ENST00000524126 CLDN14O95500 239 aa8.58□□□□□ -1.04
SPIDR-224ENST00000524126 CLDN1O95832 211 aa8.58□□□□□ -1.04
SPIDR-224ENST00000524126 IGKV1-5P01602 117 aa8.58□□□□□ -1.04
SPIDR-224ENST00000524126 F2RP25116 425 aa8.58□□□□□ -1.04
SPIDR-224ENST00000524126 GRB2P62993 217 aaKnown RBP8.58□□□□□ -1.04
SPIDR-224ENST00000524126 DAZAP2Q15038 168 aaPredicted RBP8.58□□□□□ -1.04
SPIDR-224ENST00000524126 HIST3H3Q16695 136 aa8.58□□□□□ -1.04
SPIDR-224ENST00000524126 TRIM61Q5EBN2 209 aa8.58□□□□□ -1.04
SPIDR-224ENST00000524126 OR10J3Q5JRS4 329 aa8.58□□□□□ -1.04
SPIDR-224ENST00000524126 C16orf47Q6ZP98 133 aaPredicted RBP8.58□□□□□ -1.04
SPIDR-224ENST00000524126 NAA38Q9BRA0 125 aaKnown RBP8.58□□□□□ -1.04
SPIDR-224ENST00000524126 FNDC4Q9H6D8 234 aaPredicted RBP8.58□□□□□ -1.04
SPIDR-224ENST00000524126 TIMM9Q9Y5J7 89 aa8.58□□□□□ -1.04
SPIDR-224ENST00000524126 ATP23Q9Y6H3 246 aa8.58□□□□□ -1.04
SPIDR-224ENST00000524126 RP1P56715 2156 aa8.58□□□□□ -1.04
SPIDR-224ENST00000524126 LRP4O75096 1905 aa8.58□□□□□ -1.04
SPIDR-224ENST00000524126 PCDH15Q96QU1 1955 aa8.58□□□□□ -1.04
SPIDR-224ENST00000524126 DEGS1O15121 323 aa8.58□□□□□ -1.04
SPIDR-224ENST00000524126 COX5AP20674 150 aa8.58□□□□□ -1.04
SPIDR-224ENST00000524126 FOXE3Q13461 319 aa8.58□□□□□ -1.04
SPIDR-224ENST00000524126 RSPO1Q2MKA7 263 aaPredicted RBP8.58□□□□□ -1.04
SPIDR-224ENST00000524126 RPEL1Q2QD12 228 aa8.58□□□□□ -1.04
SPIDR-224ENST00000524126 PRR31Q5SQ13 230 aa8.58□□□□□ -1.04
SPIDR-224ENST00000524126 TMEM136Q6ZRR5 245 aa8.58□□□□□ -1.04
SPIDR-224ENST00000524126 PILRBQ9UKJ0 227 aa8.58□□□□□ -1.04
SPIDR-224ENST00000524126 RAMP3O60896 148 aa8.57□□□□□ -1.04
SPIDR-224ENST00000524126 RHOBP62745 196 aa8.57□□□□□ -1.04
SPIDR-224ENST00000524126 TRIP6Q15654 476 aaKnown RBP8.57□□□□□ -1.04
SPIDR-224ENST00000524126 TNXAQ16473 311 aa8.57□□□□□ -1.04
SPIDR-224ENST00000524126 TMEM211Q6ICI0 200 aa8.57□□□□□ -1.04
SPIDR-224ENST00000524126 MRPL54Q6P161 138 aaKnown RBP8.57□□□□□ -1.04
SPIDR-224ENST00000524126 SLC25A47Q6Q0C1 308 aa8.57□□□□□ -1.04
SPIDR-224ENST00000524126 C19orf35Q6ZS72 473 aa8.57□□□□□ -1.04
SPIDR-224ENST00000524126 UBALD2Q8IYN6 164 aa8.57□□□□□ -1.04
SPIDR-224ENST00000524126 CHRDL1Q9BU40 450 aa8.57□□□□□ -1.04
SPIDR-224ENST00000524126 LRRC61Q9BV99 259 aa8.57□□□□□ -1.04
SPIDR-224ENST00000524126 GNB1LQ9BYB4 327 aa8.57□□□□□ -1.04
SPIDR-224ENST00000524126 A0A087X0K7 114 aa8.57□□□□□ -1.04
SPIDR-224ENST00000524126 FAM181BA6NEQ2 426 aa8.57□□□□□ -1.04
SPIDR-224ENST00000524126 GAGE10A6NGK3 116 aa8.57□□□□□ -1.04
SPIDR-224ENST00000524126 ZNF16P17020 682 aaPredicted RBP8.57□□□□□ -1.04
SPIDR-224ENST00000524126 NPY1RP25929 384 aa8.57□□□□□ -1.04
SPIDR-224ENST00000524126 PPOXP50336 477 aa8.57□□□□□ -1.04
SPIDR-224ENST00000524126 ZNF439Q8NDP4 499 aa8.57□□□□□ -1.04
SPIDR-224ENST00000524126 TSTD1Q8NFU3 115 aa8.57□□□□□ -1.04
SPIDR-224ENST00000524126 BORCS8Q96FH0 119 aa8.57□□□□□ -1.04
SPIDR-224ENST00000524126 GTSF1LQ9H1H1 148 aa8.57□□□□□ -1.04
SPIDR-224ENST00000524126 KCNIP2Q9NS61 270 aa8.57□□□□□ -1.04
SPIDR-224ENST00000524126 ABI3Q9P2A4 366 aa8.57□□□□□ -1.04
SPIDR-224ENST00000524126 ZNF407Q9C0G0 2248 aa8.57□□□□□ -1.04
SPIDR-224ENST00000524126 FREM2Q5SZK8 3169 aa8.56□□□□□ -1.04
SPIDR-224ENST00000524126 LIPT2A6NK58 231 aa8.56□□□□□ -1.04
SPIDR-224ENST00000524126 C9orf172C9J069 976 aa8.56□□□□□ -1.04
SPIDR-224ENST00000524126 S100GP29377 79 aa8.56□□□□□ -1.04
SPIDR-224ENST00000524126 SMAGPQ0VAQ4 97 aa8.56□□□□□ -1.04
SPIDR-224ENST00000524126 FXYD3Q14802 87 aa8.56□□□□□ -1.04
SPIDR-224ENST00000524126 OR8B8Q15620 311 aa8.56□□□□□ -1.04
SPIDR-224ENST00000524126 PHYHD1Q5SRE7 291 aa8.56□□□□□ -1.04
SPIDR-224ENST00000524126 SPSB1Q96BD6 273 aa8.56□□□□□ -1.04
SPIDR-224ENST00000524126 NPCDR1Q9BY65 106 aa8.56□□□□□ -1.04
SPIDR-224ENST00000524126 ARL2-SNX15V9GYD0 113 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms