RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 KIR3DL3Q8N743 410 aa11.4□□□□□ -0.58
PABPC1-208ENST00000519004 OR2AE1Q8NHA4 323 aa11.4□□□□□ -0.58
PABPC1-208ENST00000519004 C18orf32Q8TCD1 76 aa11.4□□□□□ -0.58
PABPC1-208ENST00000519004 NPVFQ9HCQ7 196 aa11.4□□□□□ -0.58
PABPC1-208ENST00000519004 GPR27Q9NS67 375 aa11.4□□□□□ -0.58
PABPC1-208ENST00000519004 TMEM38BQ9NVV0 291 aa11.4□□□□□ -0.58
PABPC1-208ENST00000519004 OR51B2Q9Y5P1 312 aa11.4□□□□□ -0.58
PABPC1-208ENST00000519004 UNC80Q8N2C7 3258 aa11.4□□□□□ -0.58
PABPC1-208ENST00000519004 PIGBOS1A0A0B4J2F0 54 aa11.4□□□□□ -0.58
PABPC1-208ENST00000519004 CDIPTO14735 213 aa11.4□□□□□ -0.58
PABPC1-208ENST00000519004 SRSF7Q16629 238 aaKnown RBP eCLIP11.4□□□□□ -0.58
PABPC1-208ENST00000519004 PLCXD3Q63HM9 321 aa11.4□□□□□ -0.58
PABPC1-208ENST00000519004 COMMD5Q9GZQ3 224 aa11.4□□□□□ -0.58
PABPC1-208ENST00000519004 PILRBQ9UKJ0 227 aa11.4□□□□□ -0.58
PABPC1-208ENST00000519004 M0R135 149 aa11.39□□□□□ -0.59
PABPC1-208ENST00000519004 PTGDSP41222 190 aa11.39□□□□□ -0.59
PABPC1-208ENST00000519004 LHX8Q68G74 356 aa11.39□□□□□ -0.59
PABPC1-208ENST00000519004 SLC25A34Q6PIV7 304 aa11.39□□□□□ -0.59
PABPC1-208ENST00000519004 Q8N7P7 452 aa11.39□□□□□ -0.59
PABPC1-208ENST00000519004 ST8SIA1Q92185 356 aa11.39□□□□□ -0.59
PABPC1-208ENST00000519004 ZNF799Q96GE5 643 aa11.39□□□□□ -0.59
PABPC1-208ENST00000519004 CHRDL1Q9BU40 450 aa11.39□□□□□ -0.59
PABPC1-208ENST00000519004 FAM231BA6NCW3 169 aa11.39□□□□□ -0.59
PABPC1-208ENST00000519004 AZU1P20160 251 aa11.39□□□□□ -0.59
PABPC1-208ENST00000519004 COX19Q49B96 90 aa11.39□□□□□ -0.59
PABPC1-208ENST00000519004 PET117Q6UWS5 81 aa11.39□□□□□ -0.59
PABPC1-208ENST00000519004 RAB1CQ92928 201 aa11.39□□□□□ -0.59
PABPC1-208ENST00000519004 ATP6V0BQ99437 205 aa11.39□□□□□ -0.59
PABPC1-208ENST00000519004 TXNDC17Q9BRA2 123 aa11.39□□□□□ -0.59
PABPC1-208ENST00000519004 ARHGEF17Q96PE2 2063 aaPredicted RBP11.39□□□□□ -0.59
PABPC1-208ENST00000519004 C7orf71A4D174 169 aa11.38□□□□□ -0.59
PABPC1-208ENST00000519004 OR4C46A6NHA9 309 aa11.38□□□□□ -0.59
PABPC1-208ENST00000519004 M0R2Z0 102 aa11.38□□□□□ -0.59
PABPC1-208ENST00000519004 EFNA2O43921 213 aa11.38□□□□□ -0.59
PABPC1-208ENST00000519004 HLA-DQA1P01909 254 aa11.38□□□□□ -0.59
PABPC1-208ENST00000519004 AMY1AP04745 511 aa11.38□□□□□ -0.59
PABPC1-208ENST00000519004 S100GP29377 79 aa11.38□□□□□ -0.59
PABPC1-208ENST00000519004 SLC35B1P78383 322 aa11.38□□□□□ -0.59
PABPC1-208ENST00000519004 PCSK4Q6UW60 755 aa11.38□□□□□ -0.59
PABPC1-208ENST00000519004 FOXL2NBQ6ZUU3 175 aa11.38□□□□□ -0.59
PABPC1-208ENST00000519004 LMX1AQ8TE12 382 aa11.38□□□□□ -0.59
PABPC1-208ENST00000519004 EAF1Q96JC9 268 aaPredicted RBP11.38□□□□□ -0.59
PABPC1-208ENST00000519004 GUCD1Q96NT3 240 aa11.38□□□□□ -0.59
PABPC1-208ENST00000519004 ULBP2Q9BZM5 246 aa11.38□□□□□ -0.59
PABPC1-208ENST00000519004 PLSCR4Q9NRQ2 329 aa11.38□□□□□ -0.59
PABPC1-208ENST00000519004 PSG11Q9UQ72 335 aa11.38□□□□□ -0.59
PABPC1-208ENST00000519004 hDV102S1A0JD36 115 aa11.38□□□□□ -0.59
PABPC1-208ENST00000519004 LRP5LA4QPB2 252 aa11.38□□□□□ -0.59
PABPC1-208ENST00000519004 HAND1O96004 215 aa11.38□□□□□ -0.59
PABPC1-208ENST00000519004 VWC2Q2TAL6 325 aa11.38□□□□□ -0.59
PABPC1-208ENST00000519004 ZNF585BQ52M93 769 aa11.38□□□□□ -0.59
PABPC1-208ENST00000519004 HLA-DQA1Q5Y7H0 255 aa11.38□□□□□ -0.59
PABPC1-208ENST00000519004 OOSP2Q86WS3 158 aa11.38□□□□□ -0.59
PABPC1-208ENST00000519004 GJC3Q8NFK1 279 aa11.38□□□□□ -0.59
PABPC1-208ENST00000519004 JMJD8Q96S16 334 aa11.38□□□□□ -0.59
PABPC1-208ENST00000519004 FNDC4Q9H6D8 234 aaPredicted RBP11.38□□□□□ -0.59
PABPC1-208ENST00000519004 SELENOKQ9Y6D0 94 aa11.38□□□□□ -0.59
PABPC1-208ENST00000519004 SZT2Q5T011 3432 aa11.37□□□□□ -0.59
PABPC1-208ENST00000519004 C9JCJ5 164 aa11.37□□□□□ -0.59
PABPC1-208ENST00000519004 H0Y8X5 98 aa11.37□□□□□ -0.59
PABPC1-208ENST00000519004 HSBP1O75506 76 aa11.37□□□□□ -0.59
PABPC1-208ENST00000519004 TGFBR3Q03167 851 aa11.37□□□□□ -0.59
PABPC1-208ENST00000519004 ZNF841Q6ZN19 808 aa11.37□□□□□ -0.59
PABPC1-208ENST00000519004 GTF2H5Q6ZYL4 71 aa11.37□□□□□ -0.59
PABPC1-208ENST00000519004 HS3ST3A1Q9Y663 406 aa11.37□□□□□ -0.59
PABPC1-208ENST00000519004 ATP23Q9Y6H3 246 aa11.37□□□□□ -0.59
PABPC1-208ENST00000519004 LY96Q9Y6Y9 160 aa11.37□□□□□ -0.59
PABPC1-208ENST00000519004 A0A087X0K7 114 aa11.37□□□□□ -0.59
PABPC1-208ENST00000519004 FAM90A26D6RGX4 464 aa11.37□□□□□ -0.59
PABPC1-208ENST00000519004 MT-CO2P00403 227 aa11.37□□□□□ -0.59
PABPC1-208ENST00000519004 HLA-DRB1P01911 266 aa11.37□□□□□ -0.59
PABPC1-208ENST00000519004 APCSP02743 223 aa11.37□□□□□ -0.59
PABPC1-208ENST00000519004 RPS16P62249 146 aaKnown RBP11.37□□□□□ -0.59
PABPC1-208ENST00000519004 ZNF718Q3SXZ3 478 aa11.37□□□□□ -0.59
PABPC1-208ENST00000519004 OR1F12Q8NHA8 337 aa11.37□□□□□ -0.59
PABPC1-208ENST00000519004 TECRQ9NZ01 308 aaKnown RBP11.37□□□□□ -0.59
PABPC1-208ENST00000519004 ZNF835Q9Y2P0 537 aa11.37□□□□□ -0.59
PABPC1-208ENST00000519004 YTHDF2Q9Y5A9 579 aaKnown RBP11.37□□□□□ -0.59
PABPC1-208ENST00000519004 GTF3C1Q12789 2109 aa11.36□□□□□ -0.59
PABPC1-208ENST00000519004 RRHO14718 337 aa11.36□□□□□ -0.59
PABPC1-208ENST00000519004 CLDN14O95500 239 aa11.36□□□□□ -0.59
PABPC1-208ENST00000519004 ARL14EPLP0DKL9 152 aa11.36□□□□□ -0.59
PABPC1-208ENST00000519004 CRYBB3P26998 211 aa11.36□□□□□ -0.59
PABPC1-208ENST00000519004 GUCA1AP43080 201 aaPredicted RBP11.36□□□□□ -0.59
PABPC1-208ENST00000519004 RPL31P62899 125 aaKnown RBP11.36□□□□□ -0.59
PABPC1-208ENST00000519004 HIST1H1AQ02539 215 aaPredicted RBP11.36□□□□□ -0.59
PABPC1-208ENST00000519004 TMEM42Q69YG0 159 aa11.36□□□□□ -0.59
PABPC1-208ENST00000519004 MRPL54Q6P161 138 aaKnown RBP11.36□□□□□ -0.59
PABPC1-208ENST00000519004 OR10W1Q8NGF6 305 aa11.36□□□□□ -0.59
PABPC1-208ENST00000519004 SCRT2Q9NQ03 307 aa11.36□□□□□ -0.59
PABPC1-208ENST00000519004 OR2W1Q9Y3N9 320 aa11.36□□□□□ -0.59
PABPC1-208ENST00000519004 KIR2DS1A0A191URI9 304 aa11.36□□□□□ -0.59
PABPC1-208ENST00000519004 H3BMH7 237 aa11.36□□□□□ -0.59
PABPC1-208ENST00000519004 K7EP34 96 aa11.36□□□□□ -0.59
PABPC1-208ENST00000519004 IGLV2-14P01704 120 aa11.36□□□□□ -0.59
PABPC1-208ENST00000519004 EN2P19622 333 aaPredicted RBP11.36□□□□□ -0.59
PABPC1-208ENST00000519004 KIR2DS4P43632 304 aa11.36□□□□□ -0.59
PABPC1-208ENST00000519004 TCL1AP56279 114 aa11.36□□□□□ -0.59
PABPC1-208ENST00000519004 SLAQ13239 276 aa11.36□□□□□ -0.59
PABPC1-208ENST00000519004 KIR2DS1Q14954 304 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms