RNA–Protein interactions for RNA: ENST00000517766.5

CD47-205, Transcript of CD47 molecule, humanhuman

TSL 2

Gene CD47, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-205ENST00000517766 LINC00574Q9H8X3 128 aa4.83□□□□□ -1.64
CD47-205ENST00000517766 CISD1Q9NZ45 108 aaKnown RBP4.83□□□□□ -1.64
CD47-205ENST00000517766 FAM30AQ9NZY2 134 aa4.83□□□□□ -1.64
CD47-205ENST00000517766 CLN8Q9UBY8 286 aa4.83□□□□□ -1.64
CD47-205ENST00000517766 RNF150Q9ULK6 438 aa4.83□□□□□ -1.64
CD47-205ENST00000517766 PSG11Q9UQ72 335 aa4.83□□□□□ -1.64
CD47-205ENST00000517766 WSB1Q9Y6I7 421 aa4.83□□□□□ -1.64
CD47-205ENST00000517766 DOCK11Q5JSL3 2073 aa4.83□□□□□ -1.64
CD47-205ENST00000517766 PCNX1Q96RV3 2341 aa4.83□□□□□ -1.64
CD47-205ENST00000517766 POLEQ07864 2286 aa4.83□□□□□ -1.64
CD47-205ENST00000517766 ICE1Q9Y2F5 2266 aa4.83□□□□□ -1.64
CD47-205ENST00000517766 CELSR3Q9NYQ7 3312 aa4.82□□□□□ -1.64
CD47-205ENST00000517766 PLCE1Q9P212 2302 aa4.82□□□□□ -1.64
CD47-205ENST00000517766 IGHV1-69-2A0A0G2JMI3 117 aa4.82□□□□□ -1.64
CD47-205ENST00000517766 RAB19A4D1S5 217 aa4.82□□□□□ -1.64
CD47-205ENST00000517766 MFSD2BA6NFX1 497 aa4.82□□□□□ -1.64
CD47-205ENST00000517766 FAM24AA6NFZ4 105 aa4.82□□□□□ -1.64
CD47-205ENST00000517766 FAM90A9PA6NNJ1 464 aa4.82□□□□□ -1.64
CD47-205ENST00000517766 RBFOX2O43251 390 aaKnown RBP eCLIP4.82□□□□□ -1.64
CD47-205ENST00000517766 SYNGR2O43760 224 aa4.82□□□□□ -1.64
CD47-205ENST00000517766 CHST1O43916 411 aa4.82□□□□□ -1.64
CD47-205ENST00000517766 SSSCA1O60232 199 aa4.82□□□□□ -1.64
CD47-205ENST00000517766 DFFBO76075 338 aa4.82□□□□□ -1.64
CD47-205ENST00000517766 CLDN14O95500 239 aa4.82□□□□□ -1.64
CD47-205ENST00000517766 HPRT1P00492 218 aa4.82□□□□□ -1.64
CD47-205ENST00000517766 IGKV1-5P01602 117 aa4.82□□□□□ -1.64
CD47-205ENST00000517766 FGF2P09038 288 aa4.82□□□□□ -1.64
CD47-205ENST00000517766 DAOP14920 347 aa4.82□□□□□ -1.64
CD47-205ENST00000517766 NDUFB7P17568 137 aa4.82□□□□□ -1.64
CD47-205ENST00000517766 AGAP20933 346 aa4.82□□□□□ -1.64
CD47-205ENST00000517766 DUTP33316 252 aaKnown RBP4.82□□□□□ -1.64
CD47-205ENST00000517766 THBS3P49746 956 aa4.82□□□□□ -1.64
CD47-205ENST00000517766 SULT1A2P50226 295 aa4.82□□□□□ -1.64
CD47-205ENST00000517766 PPOXP50336 477 aa4.82□□□□□ -1.64
CD47-205ENST00000517766 RAB5CP51148 216 aa4.82□□□□□ -1.64
CD47-205ENST00000517766 CAV2P51636 162 aa4.82□□□□□ -1.64
CD47-205ENST00000517766 ZNF134P52741 427 aa4.82□□□□□ -1.64
CD47-205ENST00000517766 RPL30P62888 115 aaKnown RBP4.82□□□□□ -1.64
CD47-205ENST00000517766 LTC4SQ16873 150 aa4.82□□□□□ -1.64
CD47-205ENST00000517766 HFEQ30201 348 aa4.82□□□□□ -1.64
CD47-205ENST00000517766 ZNF672Q499Z4 452 aaPredicted RBP4.82□□□□□ -1.64
CD47-205ENST00000517766 LRRC10Q5BKY1 277 aa4.82□□□□□ -1.64
CD47-205ENST00000517766 CXorf66Q5JRM2 361 aaPredicted RBP4.82□□□□□ -1.64
CD47-205ENST00000517766 FAM74A1Q5RGS3 127 aa4.82□□□□□ -1.64
CD47-205ENST00000517766 FAM201AQ5SY85 155 aa4.82□□□□□ -1.64
CD47-205ENST00000517766 UQCC3Q6UW78 93 aa4.82□□□□□ -1.64
CD47-205ENST00000517766 H2BFWTQ7Z2G1 175 aa4.82□□□□□ -1.64
CD47-205ENST00000517766 STX12Q86Y82 276 aa4.82□□□□□ -1.64
CD47-205ENST00000517766 MUC15Q8N387 334 aa4.82□□□□□ -1.64
CD47-205ENST00000517766 FAM216BQ8N7L0 139 aa4.82□□□□□ -1.64
CD47-205ENST00000517766 TMED6Q8WW62 240 aa4.82□□□□□ -1.64
CD47-205ENST00000517766 CCL17Q92583 94 aa4.82□□□□□ -1.64
CD47-205ENST00000517766 SMIM8Q96KF7 97 aa4.82□□□□□ -1.64
CD47-205ENST00000517766 WWC2-AS2Q96NR7 200 aa4.82□□□□□ -1.64
CD47-205ENST00000517766 S1PR3Q99500 378 aa4.82□□□□□ -1.64
CD47-205ENST00000517766 GINS3Q9BRX5 216 aa4.82□□□□□ -1.64
CD47-205ENST00000517766 AGMATQ9BSE5 352 aa4.82□□□□□ -1.64
CD47-205ENST00000517766 TMEM204Q9BSN7 226 aa4.82□□□□□ -1.64
CD47-205ENST00000517766 DCTN5Q9BTE1 182 aa4.82□□□□□ -1.64
CD47-205ENST00000517766 ABHD14AQ9BUJ0 271 aa4.82□□□□□ -1.64
CD47-205ENST00000517766 REG4Q9BYZ8 158 aa4.82□□□□□ -1.64
CD47-205ENST00000517766 SMIM3Q9BZL3 60 aa4.82□□□□□ -1.64
CD47-205ENST00000517766 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.82□□□□□ -1.64
CD47-205ENST00000517766 KAAG1Q9UBP8 84 aa4.82□□□□□ -1.64
CD47-205ENST00000517766 SLC25A10Q9UBX3 287 aaPredicted RBP4.82□□□□□ -1.64
CD47-205ENST00000517766 CACNG5Q9UF02 275 aa4.82□□□□□ -1.64
CD47-205ENST00000517766 PRELID3BQ9Y3B1 194 aa4.82□□□□□ -1.64
CD47-205ENST00000517766 LINC00312Q9Y6C7 94 aa4.82□□□□□ -1.64
CD47-205ENST00000517766 DIDO1Q9BTC0 2240 aaKnown RBP4.82□□□□□ -1.64
CD47-205ENST00000517766 USF3Q68DE3 2245 aa4.81□□□□□ -1.64
CD47-205ENST00000517766 A0A0G2JRQ6 117 aa4.81□□□□□ -1.64
CD47-205ENST00000517766 IGSF23A1L1A6 192 aa4.81□□□□□ -1.64
CD47-205ENST00000517766 C17orf98A8MV24 154 aa4.81□□□□□ -1.64
CD47-205ENST00000517766 ZNF705EA8MWA4 302 aaPredicted RBP4.81□□□□□ -1.64
CD47-205ENST00000517766 A8MXK9 166 aa4.81□□□□□ -1.64
CD47-205ENST00000517766 DEFB108AA8MXU0 73 aa4.81□□□□□ -1.64
CD47-205ENST00000517766 TEX46H3BTG2 121 aa4.81□□□□□ -1.64
CD47-205ENST00000517766 M0R1X1 148 aa4.81□□□□□ -1.64
CD47-205ENST00000517766 TNFRSF13BO14836 293 aaPredicted RBP4.81□□□□□ -1.64
CD47-205ENST00000517766 TXNL1O43396 289 aa4.81□□□□□ -1.64
CD47-205ENST00000517766 FCGR3BO75015 233 aa4.81□□□□□ -1.64
CD47-205ENST00000517766 S1PR2O95136 353 aa4.81□□□□□ -1.64
CD47-205ENST00000517766 ELANEP08246 267 aa4.81□□□□□ -1.64
CD47-205ENST00000517766 P0C879 139 aa4.81□□□□□ -1.64
CD47-205ENST00000517766 FAM157CP0CG43 387 aa4.81□□□□□ -1.64
CD47-205ENST00000517766 SPP1P10451 314 aa4.81□□□□□ -1.64
CD47-205ENST00000517766 SELLP14151 372 aa4.81□□□□□ -1.64
CD47-205ENST00000517766 BTF3P20290 206 aaKnown RBP4.81□□□□□ -1.64
CD47-205ENST00000517766 ZP3P21754 424 aa4.81□□□□□ -1.64
CD47-205ENST00000517766 SULT1A1P50225 295 aa4.81□□□□□ -1.64
CD47-205ENST00000517766 ERVK-16P61578 105 aa4.81□□□□□ -1.64
CD47-205ENST00000517766 HBG1P69891 147 aa4.81□□□□□ -1.64
CD47-205ENST00000517766 HBG2P69892 147 aa4.81□□□□□ -1.64
CD47-205ENST00000517766 ZNF816Q0VGE8 651 aaPredicted RBP4.81□□□□□ -1.64
CD47-205ENST00000517766 LY6DQ14210 128 aa4.81□□□□□ -1.64
CD47-205ENST00000517766 CD300EQ496F6 205 aaPredicted RBP4.81□□□□□ -1.64
CD47-205ENST00000517766 MIDNQ504T8 468 aa4.81□□□□□ -1.64
CD47-205ENST00000517766 BTNL3Q6UXE8 466 aa4.81□□□□□ -1.64
CD47-205ENST00000517766 IL34Q6ZMJ4 242 aa4.81□□□□□ -1.64
CD47-205ENST00000517766 CCDC28AQ8IWP9 274 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms