RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 SRP14P37108 136 aaKnown RBP6.19□□□□□ -1.42
CLIP1-205ENST00000514271 FAM3BP58499 235 aaPredicted RBP6.19□□□□□ -1.42
CLIP1-205ENST00000514271 ZNF266Q14584 549 aa6.19□□□□□ -1.42
CLIP1-205ENST00000514271 IGFBP7Q16270 282 aa6.19□□□□□ -1.42
CLIP1-205ENST00000514271 MPV17LQ2QL34 196 aa6.19□□□□□ -1.42
CLIP1-205ENST00000514271 ZNF585BQ52M93 769 aa6.19□□□□□ -1.42
CLIP1-205ENST00000514271 TMEM182Q6ZP80 229 aaPredicted RBP6.19□□□□□ -1.42
CLIP1-205ENST00000514271 ZNF818PQ6ZRF7 136 aa6.19□□□□□ -1.42
CLIP1-205ENST00000514271 Q6ZT83 130 aa6.19□□□□□ -1.42
CLIP1-205ENST00000514271 SUMF2Q8NBJ7 301 aa6.19□□□□□ -1.42
CLIP1-205ENST00000514271 SPSB1Q96BD6 273 aa6.19□□□□□ -1.42
CLIP1-205ENST00000514271 C3orf85A0A1B0GTC6 90 aa6.19□□□□□ -1.42
CLIP1-205ENST00000514271 FAM230AA0A1W2PPH8 454 aa6.19□□□□□ -1.42
CLIP1-205ENST00000514271 H3BSH0 61 aa6.19□□□□□ -1.42
CLIP1-205ENST00000514271 IFNL4K9M1U5 179 aa6.19□□□□□ -1.42
CLIP1-205ENST00000514271 PPP1R2P9O14990 202 aa6.19□□□□□ -1.42
CLIP1-205ENST00000514271 CYB5BO43169 146 aa6.19□□□□□ -1.42
CLIP1-205ENST00000514271 ST8SIA3O43173 380 aa6.19□□□□□ -1.42
CLIP1-205ENST00000514271 MRPL33O75394 65 aaKnown RBP6.19□□□□□ -1.42
CLIP1-205ENST00000514271 PAX5Q02548 391 aa6.19□□□□□ -1.42
CLIP1-205ENST00000514271 OR2T2Q6IF00 324 aa6.19□□□□□ -1.42
CLIP1-205ENST00000514271 Q6ZWC4 215 aa6.19□□□□□ -1.42
CLIP1-205ENST00000514271 GCNT2Q8N0V5 402 aa6.19□□□□□ -1.42
CLIP1-205ENST00000514271 RTN4IP1Q8WWV3 396 aaPredicted RBP6.19□□□□□ -1.42
CLIP1-205ENST00000514271 ALKBH7Q9BT30 221 aaPredicted RBP6.19□□□□□ -1.42
CLIP1-205ENST00000514271 SRXN1Q9BYN0 137 aa6.19□□□□□ -1.42
CLIP1-205ENST00000514271 NELFAQ9H3P2 528 aa6.19□□□□□ -1.42
CLIP1-205ENST00000514271 ZFHX4Q86UP3 3567 aa6.18□□□□□ -1.42
CLIP1-205ENST00000514271 FRYLO94915 3013 aa6.18□□□□□ -1.42
CLIP1-205ENST00000514271 TNFSF13O75888 250 aa6.18□□□□□ -1.42
CLIP1-205ENST00000514271 NPSP0C0P6 89 aa6.18□□□□□ -1.42
CLIP1-205ENST00000514271 RD3LP0DJH9 198 aa6.18□□□□□ -1.42
CLIP1-205ENST00000514271 FABP4P15090 132 aa6.18□□□□□ -1.42
CLIP1-205ENST00000514271 IGFBP2P18065 325 aa6.18□□□□□ -1.42
CLIP1-205ENST00000514271 KIR2DL2P43627 348 aaPredicted RBP6.18□□□□□ -1.42
CLIP1-205ENST00000514271 DYNLT3P51808 116 aa6.18□□□□□ -1.42
CLIP1-205ENST00000514271 ATP5IP56385 69 aaPredicted RBP6.18□□□□□ -1.42
CLIP1-205ENST00000514271 SERF2P84101 59 aa6.18□□□□□ -1.42
CLIP1-205ENST00000514271 SRYQ05066 204 aa6.18□□□□□ -1.42
CLIP1-205ENST00000514271 RPP25LQ8N5L8 163 aaKnown RBP6.18□□□□□ -1.42
CLIP1-205ENST00000514271 ASCL2Q99929 193 aa6.18□□□□□ -1.42
CLIP1-205ENST00000514271 GEMIN7Q9H840 131 aaKnown RBP6.18□□□□□ -1.42
CLIP1-205ENST00000514271 MSL2Q9HCI7 577 aa6.18□□□□□ -1.42
CLIP1-205ENST00000514271 OR2S2Q9NQN1 319 aa6.18□□□□□ -1.42
CLIP1-205ENST00000514271 RPRMQ9NS64 109 aa6.18□□□□□ -1.42
CLIP1-205ENST00000514271 MED29Q9NX70 200 aa6.18□□□□□ -1.42
CLIP1-205ENST00000514271 SPTBN2O15020 2390 aa6.18□□□□□ -1.42
CLIP1-205ENST00000514271 CACNA1GO43497 2377 aa6.18□□□□□ -1.42
CLIP1-205ENST00000514271 TRBV20OR9-2A0A075B6H5 130 aa6.18□□□□□ -1.42
CLIP1-205ENST00000514271 A0A1W2PPV4 95 aa6.18□□□□□ -1.42
CLIP1-205ENST00000514271 ZFP92A6NM28 416 aa6.18□□□□□ -1.42
CLIP1-205ENST00000514271 RER1O15258 196 aa6.18□□□□□ -1.42
CLIP1-205ENST00000514271 PPBPP02775 128 aa6.18□□□□□ -1.42
CLIP1-205ENST00000514271 H2BFMP0C1H6 154 aa6.18□□□□□ -1.42
CLIP1-205ENST00000514271 CCNOP22674 350 aa6.18□□□□□ -1.42
CLIP1-205ENST00000514271 CCKARP32238 428 aa6.18□□□□□ -1.42
CLIP1-205ENST00000514271 ATP5J2P56134 94 aa6.18□□□□□ -1.42
CLIP1-205ENST00000514271 RBM11P57052 281 aaKnown RBP6.18□□□□□ -1.42
CLIP1-205ENST00000514271 Q0VG73 95 aa6.18□□□□□ -1.42
CLIP1-205ENST00000514271 SEM1Q6ZVN7 128 aa6.18□□□□□ -1.42
CLIP1-205ENST00000514271 AAED1Q7RTV5 226 aa6.18□□□□□ -1.42
CLIP1-205ENST00000514271 C1orf87Q8N0U7 546 aa6.18□□□□□ -1.42
CLIP1-205ENST00000514271 TMEM186Q96B77 213 aa6.18□□□□□ -1.42
CLIP1-205ENST00000514271 STARD4Q96DR4 205 aa6.18□□□□□ -1.42
CLIP1-205ENST00000514271 SPACA5Q96QH8 159 aa6.18□□□□□ -1.42
CLIP1-205ENST00000514271 RBM24Q9BX46 236 aaKnown RBP6.18□□□□□ -1.42
CLIP1-205ENST00000514271 BORCS7-ASMTA0A0B4J1R7 106 aa6.18□□□□□ -1.42
CLIP1-205ENST00000514271 TRAV25A0A0B4J276 109 aa6.18□□□□□ -1.42
CLIP1-205ENST00000514271 FAM24AA6NFZ4 105 aa6.18□□□□□ -1.42
CLIP1-205ENST00000514271 XKRYO14609 159 aa6.18□□□□□ -1.42
CLIP1-205ENST00000514271 IGKV1-5P01602 117 aa6.18□□□□□ -1.42
CLIP1-205ENST00000514271 MMP7P09237 267 aaPredicted RBP6.18□□□□□ -1.42
CLIP1-205ENST00000514271 AREGP15514 252 aa6.18□□□□□ -1.42
CLIP1-205ENST00000514271 AMY2BP19961 511 aa6.18□□□□□ -1.42
CLIP1-205ENST00000514271 SERPINA2P20848 420 aa6.18□□□□□ -1.42
CLIP1-205ENST00000514271 AADACP22760 399 aa6.18□□□□□ -1.42
CLIP1-205ENST00000514271 ELLP55199 621 aaPredicted RBP6.18□□□□□ -1.42
CLIP1-205ENST00000514271 CXorf66Q5JRM2 361 aaPredicted RBP6.18□□□□□ -1.42
CLIP1-205ENST00000514271 FAM208BQ5VWN6 2430 aa6.18□□□□□ -1.42
CLIP1-205ENST00000514271 NCR3LG1Q68D85 454 aa6.18□□□□□ -1.42
CLIP1-205ENST00000514271 LGI3Q8N145 548 aa6.18□□□□□ -1.42
CLIP1-205ENST00000514271 LPAR2Q9HBW0 351 aa6.18□□□□□ -1.42
CLIP1-205ENST00000514271 ONECUT1Q9UBC0 465 aa6.18□□□□□ -1.42
CLIP1-205ENST00000514271 A0A1B0GW15 77 aa6.17□□□□□ -1.42
CLIP1-205ENST00000514271 FBLL1A6NHQ2 334 aaKnown RBP6.17□□□□□ -1.42
CLIP1-205ENST00000514271 ACTL6BO94805 426 aa6.17□□□□□ -1.42
CLIP1-205ENST00000514271 PPYP01298 95 aa6.17□□□□□ -1.42
CLIP1-205ENST00000514271 UQCRFS1P47985 274 aa6.17□□□□□ -1.42
CLIP1-205ENST00000514271 SRPXP78539 464 aa6.17□□□□□ -1.42
CLIP1-205ENST00000514271 TIMM23BQ5SRD1 257 aa6.17□□□□□ -1.42
CLIP1-205ENST00000514271 MBD6Q96DN6 1003 aa6.17□□□□□ -1.42
CLIP1-205ENST00000514271 REEP6Q96HR9 211 aa6.17□□□□□ -1.42
CLIP1-205ENST00000514271 UHRF2Q96PU4 802 aa6.17□□□□□ -1.42
CLIP1-205ENST00000514271 HIST1H2AAQ96QV6 131 aa6.17□□□□□ -1.42
CLIP1-205ENST00000514271 MAGT1Q9H0U3 335 aa6.17□□□□□ -1.42
CLIP1-205ENST00000514271 CRIM1Q9NZV1 1036 aa6.17□□□□□ -1.42
CLIP1-205ENST00000514271 CACNA1BQ00975 2339 aa6.17□□□□□ -1.42
CLIP1-205ENST00000514271 DOCK7Q96N67 2140 aa6.17□□□□□ -1.42
CLIP1-205ENST00000514271 TRAV9-1A0A075B6T8 112 aa6.17□□□□□ -1.42
CLIP1-205ENST00000514271 LOC105371242A0A075B767 164 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms