RNA–Protein interactions for RNA: ENST00000513024.5

LIMCH1-218, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,129 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-218ENST00000513024 ZNF32P17041 273 aa7.58□□□□□ -1.2
LIMCH1-218ENST00000513024 TSPAN7P41732 249 aa7.58□□□□□ -1.2
LIMCH1-218ENST00000513024 WIPI1Q5MNZ9 446 aaPredicted RBP7.58□□□□□ -1.2
LIMCH1-218ENST00000513024 ZNF707Q96C28 371 aaPredicted RBP7.58□□□□□ -1.2
LIMCH1-218ENST00000513024 ZNF391Q9UJN7 358 aa7.58□□□□□ -1.2
LIMCH1-218ENST00000513024 TMEM250H0YL14 139 aa7.58□□□□□ -1.2
LIMCH1-218ENST00000513024 TNFSF13O75888 250 aa7.58□□□□□ -1.2
LIMCH1-218ENST00000513024 VSIG10L2P0DP72 767 aa7.58□□□□□ -1.2
LIMCH1-218ENST00000513024 HIKESHIQ53FT3 197 aa7.58□□□□□ -1.2
LIMCH1-218ENST00000513024 RBPMS2Q6ZRY4 209 aaKnown RBP7.58□□□□□ -1.2
LIMCH1-218ENST00000513024 OR4X1Q8NH49 305 aa7.58□□□□□ -1.2
LIMCH1-218ENST00000513024 OR2V1Q8NHB1 315 aa7.58□□□□□ -1.2
LIMCH1-218ENST00000513024 Q8WTZ3 238 aa7.58□□□□□ -1.2
LIMCH1-218ENST00000513024 NRTNQ99748 197 aa7.58□□□□□ -1.2
LIMCH1-218ENST00000513024 TRAV5A0A0B4J249 113 aa7.57□□□□□ -1.2
LIMCH1-218ENST00000513024 ALG1L2C9J202 215 aa7.57□□□□□ -1.2
LIMCH1-218ENST00000513024 NDUFB3O43676 98 aa7.57□□□□□ -1.2
LIMCH1-218ENST00000513024 VENTXO95231 258 aa7.57□□□□□ -1.2
LIMCH1-218ENST00000513024 SUMO3P55854 103 aaPredicted RBP7.57□□□□□ -1.2
LIMCH1-218ENST00000513024 RTN4RL2Q86UN3 420 aa7.57□□□□□ -1.2
LIMCH1-218ENST00000513024 ATP6V0BQ99437 205 aa7.57□□□□□ -1.2
LIMCH1-218ENST00000513024 A0A087WWC5 75 aa7.57□□□□□ -1.2
LIMCH1-218ENST00000513024 WISP3O95389 354 aaPredicted RBP7.57□□□□□ -1.2
LIMCH1-218ENST00000513024 DANCRP0C864 163 aa7.57□□□□□ -1.2
LIMCH1-218ENST00000513024 CCL2P13500 99 aa7.57□□□□□ -1.2
LIMCH1-218ENST00000513024 ZFP36L2P47974 494 aaKnown RBP7.57□□□□□ -1.2
LIMCH1-218ENST00000513024 UNQ5815/PRO19632Q6UWF5 114 aa7.57□□□□□ -1.2
LIMCH1-218ENST00000513024 NRN1Q9NPD7 142 aa7.57□□□□□ -1.2
LIMCH1-218ENST00000513024 NPDC1Q9NQX5 325 aaPredicted RBP7.57□□□□□ -1.2
LIMCH1-218ENST00000513024 VSIG4Q9Y279 399 aa7.57□□□□□ -1.2
LIMCH1-218ENST00000513024 A0A0G2JMM0 328 aa7.57□□□□□ -1.2
LIMCH1-218ENST00000513024 A0A1W2PPB8 328 aa7.57□□□□□ -1.2
LIMCH1-218ENST00000513024 KIR3DP1A8MWS1 328 aa7.57□□□□□ -1.2
LIMCH1-218ENST00000513024 SPRY3O43610 288 aa7.57□□□□□ -1.2
LIMCH1-218ENST00000513024 CT62P0C5K7 136 aa7.57□□□□□ -1.2
LIMCH1-218ENST00000513024 CEACAM3P40198 252 aa7.57□□□□□ -1.2
LIMCH1-218ENST00000513024 STARD6P59095 220 aa7.57□□□□□ -1.2
LIMCH1-218ENST00000513024 MOB3BQ86TA1 216 aa7.57□□□□□ -1.2
LIMCH1-218ENST00000513024 ZNF646O15015 1829 aaPredicted RBP7.57□□□□□ -1.2
LIMCH1-218ENST00000513024 CACNA1IQ9P0X4 2223 aa7.57□□□□□ -1.2
LIMCH1-218ENST00000513024 EML2O95834 649 aa7.57□□□□□ -1.2
LIMCH1-218ENST00000513024 HBBP68871 147 aa7.57□□□□□ -1.2
LIMCH1-218ENST00000513024 PAPPA-AS1Q5QFB9 102 aa7.57□□□□□ -1.2
LIMCH1-218ENST00000513024 UNQ9370/PRO34162Q6UXP9 181 aa7.57□□□□□ -1.2
LIMCH1-218ENST00000513024 BOD1L2Q8IYS8 172 aa7.57□□□□□ -1.2
LIMCH1-218ENST00000513024 NPEPL1Q8NDH3 523 aa7.57□□□□□ -1.2
LIMCH1-218ENST00000513024 OR8B12Q8NGG6 310 aa7.57□□□□□ -1.2
LIMCH1-218ENST00000513024 DIRC2Q96SL1 478 aa7.57□□□□□ -1.2
LIMCH1-218ENST00000513024 SLC52A3Q9NQ40 469 aa7.57□□□□□ -1.2
LIMCH1-218ENST00000513024 PGPEP1Q9NXJ5 209 aa7.57□□□□□ -1.2
LIMCH1-218ENST00000513024 SIRT4Q9Y6E7 314 aaPredicted RBP7.57□□□□□ -1.2
LIMCH1-218ENST00000513024 HOXC4P09017 264 aaPredicted RBP7.56□□□□□ -1.2
LIMCH1-218ENST00000513024 PRDX2P32119 198 aa7.56□□□□□ -1.2
LIMCH1-218ENST00000513024 PQLC2Q6ZP29 291 aa7.56□□□□□ -1.2
LIMCH1-218ENST00000513024 PRNTQ86SH4 94 aa7.56□□□□□ -1.2
LIMCH1-218ENST00000513024 GAPTQ8N292 157 aa7.56□□□□□ -1.2
LIMCH1-218ENST00000513024 PAXXQ9BUH6 204 aa7.56□□□□□ -1.2
LIMCH1-218ENST00000513024 LRRC61Q9BV99 259 aa7.56□□□□□ -1.2
LIMCH1-218ENST00000513024 LHX9Q9NQ69 397 aa7.56□□□□□ -1.2
LIMCH1-218ENST00000513024 MPDU1O75352 247 aa7.56□□□□□ -1.2
LIMCH1-218ENST00000513024 PPYP01298 95 aa7.56□□□□□ -1.2
LIMCH1-218ENST00000513024 RAB9AP51151 201 aa7.56□□□□□ -1.2
LIMCH1-218ENST00000513024 CACNG7P62955 275 aa7.56□□□□□ -1.2
LIMCH1-218ENST00000513024 FADS6Q8N9I5 356 aa7.56□□□□□ -1.2
LIMCH1-218ENST00000513024 PGLYRP4Q96LB8 373 aa7.56□□□□□ -1.2
LIMCH1-218ENST00000513024 LCTP09848 1927 aa7.56□□□□□ -1.2
LIMCH1-218ENST00000513024 TRAV21A0A0B4J279 112 aa7.56□□□□□ -1.2
LIMCH1-218ENST00000513024 OR2A4O95047 310 aa7.56□□□□□ -1.2
LIMCH1-218ENST00000513024 PPP1R17O96001 155 aa7.56□□□□□ -1.2
LIMCH1-218ENST00000513024 C1QCP02747 245 aa7.56□□□□□ -1.2
LIMCH1-218ENST00000513024 C1orf194Q5T5A4 169 aa7.56□□□□□ -1.2
LIMCH1-218ENST00000513024 DNM1P46Q6ZS02 220 aa7.56□□□□□ -1.2
LIMCH1-218ENST00000513024 SFTPA2Q8IWL1 248 aa7.56□□□□□ -1.2
LIMCH1-218ENST00000513024 SFTPA1Q8IWL2 248 aa7.56□□□□□ -1.2
LIMCH1-218ENST00000513024 VSTM2AQ8TAG5 236 aa7.56□□□□□ -1.2
LIMCH1-218ENST00000513024 OR2A7Q96R45 310 aa7.56□□□□□ -1.2
LIMCH1-218ENST00000513024 CHST5Q9GZS9 411 aa7.56□□□□□ -1.2
LIMCH1-218ENST00000513024 PPIL1Q9Y3C6 166 aa7.56□□□□□ -1.2
LIMCH1-218ENST00000513024 H0Y980 276 aa7.56□□□□□ -1.2
LIMCH1-218ENST00000513024 PLPP3O14495 311 aa7.56□□□□□ -1.2
LIMCH1-218ENST00000513024 SP7Q8TDD2 431 aaPredicted RBP7.56□□□□□ -1.2
LIMCH1-218ENST00000513024 HIST1H2BLQ99880 126 aa7.56□□□□□ -1.2
LIMCH1-218ENST00000513024 CCL28Q9NRJ3 127 aa7.56□□□□□ -1.2
LIMCH1-218ENST00000513024 TRIP12Q14669 1992 aaPredicted RBP7.55□□□□□ -1.2
LIMCH1-218ENST00000513024 PNLIPP16233 465 aa7.55□□□□□ -1.2
LIMCH1-218ENST00000513024 PRTN3P24158 256 aa7.55□□□□□ -1.2
LIMCH1-218ENST00000513024 WNT5AP41221 380 aa7.55□□□□□ -1.2
LIMCH1-218ENST00000513024 EFNB1P98172 346 aa7.55□□□□□ -1.2
LIMCH1-218ENST00000513024 HSD52Q0P140 79 aa7.55□□□□□ -1.2
LIMCH1-218ENST00000513024 FXYD3Q14802 87 aa7.55□□□□□ -1.2
LIMCH1-218ENST00000513024 GLRX5Q86SX6 157 aa7.55□□□□□ -1.2
LIMCH1-218ENST00000513024 AHCTF1Q8WYP5 2266 aa7.55□□□□□ -1.2
LIMCH1-218ENST00000513024 ZNF638Q14966 1978 aaKnown RBP7.55□□□□□ -1.2
LIMCH1-218ENST00000513024 VSIG8P0DPA2 414 aa7.55□□□□□ -1.2
LIMCH1-218ENST00000513024 DSCR4P56555 118 aaPredicted RBP7.55□□□□□ -1.2
LIMCH1-218ENST00000513024 EIF4EBP2Q13542 120 aaPredicted RBP7.55□□□□□ -1.2
LIMCH1-218ENST00000513024 SFTA2Q6UW10 78 aa7.55□□□□□ -1.2
LIMCH1-218ENST00000513024 VN1R4Q7Z5H5 301 aa7.55□□□□□ -1.2
LIMCH1-218ENST00000513024 SLC25A40Q8TBP6 338 aa7.55□□□□□ -1.2
LIMCH1-218ENST00000513024 ASB10Q8WXI3 467 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms