RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 ZBTB25P24278 435 aa14.08□□□□□ -0.16
HMGCS1-206ENST00000511774 RPS27AP62979 156 aaKnown RBP14.08□□□□□ -0.16
HMGCS1-206ENST00000511774 UNC119Q13432 240 aa14.08□□□□□ -0.16
HMGCS1-206ENST00000511774 TNXAQ16473 311 aa14.08□□□□□ -0.16
HMGCS1-206ENST00000511774 PRSS8Q16651 343 aa14.08□□□□□ -0.16
HMGCS1-206ENST00000511774 TMEM177Q53S58 311 aa14.08□□□□□ -0.16
HMGCS1-206ENST00000511774 YIF1BQ5BJH7 314 aa14.08□□□□□ -0.16
HMGCS1-206ENST00000511774 C10orf55Q5SWW7 151 aa14.08□□□□□ -0.16
HMGCS1-206ENST00000511774 ZNF485Q8NCK3 441 aa14.08□□□□□ -0.16
HMGCS1-206ENST00000511774 RNF183Q96D59 192 aa14.08□□□□□ -0.16
HMGCS1-206ENST00000511774 Q96MT0 163 aa14.08□□□□□ -0.16
HMGCS1-206ENST00000511774 AK3Q9UIJ7 227 aa14.08□□□□□ -0.16
HMGCS1-206ENST00000511774 ORC6Q9Y5N6 252 aa14.08□□□□□ -0.16
HMGCS1-206ENST00000511774 TUSC2O75896 110 aa14.07□□□□□ -0.16
HMGCS1-206ENST00000511774 C15orf32Q32M92 178 aa14.07□□□□□ -0.16
HMGCS1-206ENST00000511774 C1orf146Q5VVC0 180 aa14.07□□□□□ -0.16
HMGCS1-206ENST00000511774 BTNL8Q6UX41 500 aa14.07□□□□□ -0.16
HMGCS1-206ENST00000511774 TMPRSS11AQ6ZMR5 421 aa14.07□□□□□ -0.16
HMGCS1-206ENST00000511774 MOB1BQ7L9L4 216 aa14.07□□□□□ -0.16
HMGCS1-206ENST00000511774 UXS1Q8NBZ7 420 aa14.07□□□□□ -0.16
HMGCS1-206ENST00000511774 CCDC140Q96MF4 163 aa14.07□□□□□ -0.16
HMGCS1-206ENST00000511774 SLC29A1Q99808 456 aa14.07□□□□□ -0.16
HMGCS1-206ENST00000511774 UQCC2Q9BRT2 126 aa14.07□□□□□ -0.16
HMGCS1-206ENST00000511774 S4R3C0 116 aa14.07□□□□□ -0.16
HMGCS1-206ENST00000511774 PNMA8CA0A1B0GUJ8 204 aa14.06□□□□□ -0.16
HMGCS1-206ENST00000511774 GGCTO75223 188 aaKnown RBP14.06□□□□□ -0.16
HMGCS1-206ENST00000511774 CBR4Q8N4T8 237 aa14.06□□□□□ -0.16
HMGCS1-206ENST00000511774 PYDC1Q8WXC3 89 aa14.06□□□□□ -0.16
HMGCS1-206ENST00000511774 THRSPQ92748 146 aa14.06□□□□□ -0.16
HMGCS1-206ENST00000511774 TM2D1Q9BX74 207 aa14.06□□□□□ -0.16
HMGCS1-206ENST00000511774 SDHAF2Q9NX18 166 aa14.06□□□□□ -0.16
HMGCS1-206ENST00000511774 RDH8Q9NYR8 311 aa14.06□□□□□ -0.16
HMGCS1-206ENST00000511774 UBQLN2Q9UHD9 624 aa14.06□□□□□ -0.16
HMGCS1-206ENST00000511774 SHOXO15266 292 aa14.05□□□□□ -0.16
HMGCS1-206ENST00000511774 MPPED1O15442 326 aa14.05□□□□□ -0.16
HMGCS1-206ENST00000511774 S1PR2O95136 353 aa14.05□□□□□ -0.16
HMGCS1-206ENST00000511774 CD3GP09693 182 aa14.05□□□□□ -0.16
HMGCS1-206ENST00000511774 NANOS2P60321 138 aaKnown RBP14.05□□□□□ -0.16
HMGCS1-206ENST00000511774 QRFPP83859 136 aa14.05□□□□□ -0.16
HMGCS1-206ENST00000511774 GPHB5Q86YW7 130 aa14.05□□□□□ -0.16
HMGCS1-206ENST00000511774 NECAP1Q8NC96 275 aa14.05□□□□□ -0.16
HMGCS1-206ENST00000511774 TMEM59Q9BXS4 323 aa14.05□□□□□ -0.16
HMGCS1-206ENST00000511774 Q9N2K0 584 aa14.05□□□□□ -0.16
HMGCS1-206ENST00000511774 HSPG2P98160 4391 aa14.04□□□□□ -0.16
HMGCS1-206ENST00000511774 A8MWP6 167 aa14.04□□□□□ -0.16
HMGCS1-206ENST00000511774 SOCS1O15524 211 aa14.04□□□□□ -0.16
HMGCS1-206ENST00000511774 CTRB1P17538 263 aa14.04□□□□□ -0.16
HMGCS1-206ENST00000511774 DCKP27707 260 aa14.04□□□□□ -0.16
HMGCS1-206ENST00000511774 TAGLNQ01995 201 aaKnown RBP14.04□□□□□ -0.16
HMGCS1-206ENST00000511774 INSL4Q14641 139 aa14.04□□□□□ -0.16
HMGCS1-206ENST00000511774 CTRB2Q6GPI1 263 aa14.04□□□□□ -0.16
HMGCS1-206ENST00000511774 TTC9CQ8N5M4 171 aa14.04□□□□□ -0.16
HMGCS1-206ENST00000511774 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.04□□□□□ -0.16
HMGCS1-206ENST00000511774 ACOT12Q8WYK0 555 aa14.04□□□□□ -0.16
HMGCS1-206ENST00000511774 ZNF430Q9H8G1 570 aaPredicted RBP14.04□□□□□ -0.16
HMGCS1-206ENST00000511774 GHRLQ9UBU3 117 aa14.04□□□□□ -0.16
HMGCS1-206ENST00000511774 MED14OSP0DP75 135 aa14.03□□□□□ -0.16
HMGCS1-206ENST00000511774 FCGR2BP31994 310 aaPredicted RBP14.03□□□□□ -0.16
HMGCS1-206ENST00000511774 APOC4P55056 127 aa14.03□□□□□ -0.16
HMGCS1-206ENST00000511774 UBE2KP61086 200 aa14.03□□□□□ -0.16
HMGCS1-206ENST00000511774 UNQ9165/PRO28630Q6UXU0 137 aa14.03□□□□□ -0.16
HMGCS1-206ENST00000511774 NKAIN3Q8N8D7 197 aa14.03□□□□□ -0.16
HMGCS1-206ENST00000511774 TEX45Q8NA69 505 aa14.03□□□□□ -0.16
HMGCS1-206ENST00000511774 FBLIM1Q8WUP2 373 aa14.03□□□□□ -0.16
HMGCS1-206ENST00000511774 OR2D2Q9H210 308 aa14.03□□□□□ -0.16
HMGCS1-206ENST00000511774 PLEKHJ1Q9NW61 149 aa14.03□□□□□ -0.16
HMGCS1-206ENST00000511774 EXOSC1Q9Y3B2 195 aaKnown RBP14.03□□□□□ -0.16
HMGCS1-206ENST00000511774 ZNF320A2RRD8 509 aa14.02□□□□□ -0.17
HMGCS1-206ENST00000511774 HMX3A6NHT5 357 aa14.02□□□□□ -0.17
HMGCS1-206ENST00000511774 ARL3P36405 182 aa14.02□□□□□ -0.17
HMGCS1-206ENST00000511774 CLEC19AQ6UXS0 136 aa14.02□□□□□ -0.17
HMGCS1-206ENST00000511774 CEACAM19Q7Z692 300 aa14.02□□□□□ -0.17
HMGCS1-206ENST00000511774 GGHQ92820 318 aa14.02□□□□□ -0.17
HMGCS1-206ENST00000511774 FANCD2OSQ96PS1 177 aa14.02□□□□□ -0.17
HMGCS1-206ENST00000511774 FBXL7Q9UJT9 491 aa14.02□□□□□ -0.17
HMGCS1-206ENST00000511774 DIMT1Q9UNQ2 313 aaKnown RBP14.02□□□□□ -0.17
HMGCS1-206ENST00000511774 LOC100130705A0A1B0GUX0 176 aa14.01□□□□□ -0.17
HMGCS1-206ENST00000511774 A0A1B0GW64 132 aa14.01□□□□□ -0.17
HMGCS1-206ENST00000511774 FOXI3A8MTJ6 420 aaPredicted RBP14.01□□□□□ -0.17
HMGCS1-206ENST00000511774 TMEM14DPA8MWL7 114 aa14.01□□□□□ -0.17
HMGCS1-206ENST00000511774 TEX22C9J3V5 150 aa14.01□□□□□ -0.17
HMGCS1-206ENST00000511774 E7EUB6 86 aa14.01□□□□□ -0.17
HMGCS1-206ENST00000511774 UBE2CO00762 179 aa14.01□□□□□ -0.17
HMGCS1-206ENST00000511774 RPL35AP18077 110 aaKnown RBP14.01□□□□□ -0.17
HMGCS1-206ENST00000511774 ANKRD55Q3KP44 614 aa14.01□□□□□ -0.17
HMGCS1-206ENST00000511774 ODF3L2Q3SX64 289 aa14.01□□□□□ -0.17
HMGCS1-206ENST00000511774 C1orf100Q5SVJ3 147 aa14.01□□□□□ -0.17
HMGCS1-206ENST00000511774 LRRTM1Q86UE6 522 aa14.01□□□□□ -0.17
HMGCS1-206ENST00000511774 OR1L6Q8NGR2 347 aa14.01□□□□□ -0.17
HMGCS1-206ENST00000511774 LPAR5Q9H1C0 372 aa14.01□□□□□ -0.17
HMGCS1-206ENST00000511774 FBXL17Q9UF56 701 aa14.01□□□□□ -0.17
HMGCS1-206ENST00000511774 LINC00473A8K010 186 aa14□□□□□ -0.17
HMGCS1-206ENST00000511774 CRYZL1O95825 349 aa14□□□□□ -0.17
HMGCS1-206ENST00000511774 UBBP0CG47 229 aa14□□□□□ -0.17
HMGCS1-206ENST00000511774 SAA1P0DJI8 122 aaPredicted RBP14□□□□□ -0.17
HMGCS1-206ENST00000511774 C8orf88P0DMB2 117 aa14□□□□□ -0.17
HMGCS1-206ENST00000511774 TMEM50BP56557 158 aa14□□□□□ -0.17
HMGCS1-206ENST00000511774 VMA21Q3ZAQ7 101 aa14□□□□□ -0.17
HMGCS1-206ENST00000511774 TMEM217Q8N7C4 229 aa14□□□□□ -0.17
HMGCS1-206ENST00000511774 RIMS4Q9H426 269 aaPredicted RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms