RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 OR4M1Q8NGD0 313 aa2.21□□□□□ -2.06
TOPBP1-208ENST00000511439 OR10AD1Q8NGE0 317 aa2.21□□□□□ -2.06
TOPBP1-208ENST00000511439 OR6X1Q8NH79 312 aa2.21□□□□□ -2.06
TOPBP1-208ENST00000511439 FANK1Q8TC84 345 aa2.21□□□□□ -2.06
TOPBP1-208ENST00000511439 DCAKDQ8WVC6 231 aa2.21□□□□□ -2.06
TOPBP1-208ENST00000511439 SRSF12Q8WXF0 261 aaKnown RBP2.21□□□□□ -2.06
TOPBP1-208ENST00000511439 H1FXQ92522 213 aaKnown RBP2.21□□□□□ -2.06
TOPBP1-208ENST00000511439 FAM104AQ969W3 186 aa2.21□□□□□ -2.06
TOPBP1-208ENST00000511439 MALSU1Q96EH3 234 aa2.21□□□□□ -2.06
TOPBP1-208ENST00000511439 OR2M2Q96R28 347 aa2.21□□□□□ -2.06
TOPBP1-208ENST00000511439 NAPGQ99747 312 aaPredicted RBP2.21□□□□□ -2.06
TOPBP1-208ENST00000511439 GGTLC1Q9BX51 225 aa2.21□□□□□ -2.06
TOPBP1-208ENST00000511439 HINT2Q9BX68 163 aa2.21□□□□□ -2.06
TOPBP1-208ENST00000511439 SLC25A39Q9BZJ4 359 aaPredicted RBP2.21□□□□□ -2.06
TOPBP1-208ENST00000511439 HDHD2Q9H0R4 259 aa2.21□□□□□ -2.06
TOPBP1-208ENST00000511439 SIAEQ9HAT2 523 aa2.21□□□□□ -2.06
TOPBP1-208ENST00000511439 VCX3AQ9NNX9 186 aa2.21□□□□□ -2.06
TOPBP1-208ENST00000511439 CTPS2Q9NRF8 586 aa2.21□□□□□ -2.06
TOPBP1-208ENST00000511439 CCL28Q9NRJ3 127 aa2.21□□□□□ -2.06
TOPBP1-208ENST00000511439 ACER3Q9NUN7 267 aa2.21□□□□□ -2.06
TOPBP1-208ENST00000511439 CALYQ9NYX4 217 aa2.21□□□□□ -2.06
TOPBP1-208ENST00000511439 ADA2Q9NZK5 511 aa2.21□□□□□ -2.06
TOPBP1-208ENST00000511439 KAAG1Q9UBP8 84 aa2.21□□□□□ -2.06
TOPBP1-208ENST00000511439 GOLT1BQ9Y3E0 138 aa2.21□□□□□ -2.06
TOPBP1-208ENST00000511439 TBL2Q9Y4P3 447 aaKnown RBP2.21□□□□□ -2.06
TOPBP1-208ENST00000511439 FAT3Q8TDW7 4589 aa2.2□□□□□ -2.06
TOPBP1-208ENST00000511439 hCG_1818297A0A087WSY0 165 aa2.2□□□□□ -2.06
TOPBP1-208ENST00000511439 TRAV39A0A0B4J263 110 aa2.2□□□□□ -2.06
TOPBP1-208ENST00000511439 IGHV3-64DA0A0J9YX35 117 aa2.2□□□□□ -2.06
TOPBP1-208ENST00000511439 TMEM114B3SHH9 223 aa2.2□□□□□ -2.06
TOPBP1-208ENST00000511439 UPK1AO00322 258 aa2.2□□□□□ -2.06
TOPBP1-208ENST00000511439 RFXANKO14593 260 aa2.2□□□□□ -2.06
TOPBP1-208ENST00000511439 STK16O75716 305 aa2.2□□□□□ -2.06
TOPBP1-208ENST00000511439 EIF3GO75821 320 aaKnown RBP eCLIP2.2□□□□□ -2.06
TOPBP1-208ENST00000511439 KCNK2O95069 426 aa2.2□□□□□ -2.06
TOPBP1-208ENST00000511439 IFNA5P01569 189 aa2.2□□□□□ -2.06
TOPBP1-208ENST00000511439 GYPAP02724 150 aa2.2□□□□□ -2.06
TOPBP1-208ENST00000511439 KRT16P08779 473 aa2.2□□□□□ -2.06
TOPBP1-208ENST00000511439 CTRB1P17538 263 aa2.2□□□□□ -2.06
TOPBP1-208ENST00000511439 BGNP21810 368 aa2.2□□□□□ -2.06
TOPBP1-208ENST00000511439 SUB1P53999 127 aaKnown RBP eCLIP2.2□□□□□ -2.06
TOPBP1-208ENST00000511439 STX3Q13277 289 aa2.2□□□□□ -2.06
TOPBP1-208ENST00000511439 SKP2Q13309 424 aa2.2□□□□□ -2.06
TOPBP1-208ENST00000511439 HES1Q14469 280 aa2.2□□□□□ -2.06
TOPBP1-208ENST00000511439 OR7A5Q15622 319 aa2.2□□□□□ -2.06
TOPBP1-208ENST00000511439 RPEL1Q2QD12 228 aa2.2□□□□□ -2.06
TOPBP1-208ENST00000511439 SLC36A2Q495M3 483 aa2.2□□□□□ -2.06
TOPBP1-208ENST00000511439 LRRC10Q5BKY1 277 aa2.2□□□□□ -2.06
TOPBP1-208ENST00000511439 HHATQ5VTY9 493 aa2.2□□□□□ -2.06
TOPBP1-208ENST00000511439 ANKRD26P1Q6NSI1 321 aa2.2□□□□□ -2.06
TOPBP1-208ENST00000511439 ASCL4Q6XD76 172 aa2.2□□□□□ -2.06
TOPBP1-208ENST00000511439 SLC36A1Q7Z2H8 476 aa2.2□□□□□ -2.06
TOPBP1-208ENST00000511439 LHFPL3Q86UP9 236 aa2.2□□□□□ -2.06
TOPBP1-208ENST00000511439 ENTHD1Q8IYW4 607 aa2.2□□□□□ -2.06
TOPBP1-208ENST00000511439 TMEM61Q8N0U2 210 aa2.2□□□□□ -2.06
TOPBP1-208ENST00000511439 Q8N402 240 aa2.2□□□□□ -2.06
TOPBP1-208ENST00000511439 STPG2Q8N412 459 aa2.2□□□□□ -2.06
TOPBP1-208ENST00000511439 DEFB125Q8N687 156 aa2.2□□□□□ -2.06
TOPBP1-208ENST00000511439 FAM86B1Q8N7N1 296 aa2.2□□□□□ -2.06
TOPBP1-208ENST00000511439 Q8N9W7 124 aa2.2□□□□□ -2.06
TOPBP1-208ENST00000511439 NPBQ8NG41 125 aa2.2□□□□□ -2.06
TOPBP1-208ENST00000511439 OR4K5Q8NGD3 323 aa2.2□□□□□ -2.06
TOPBP1-208ENST00000511439 ZNF563Q8TA94 476 aa2.2□□□□□ -2.06
TOPBP1-208ENST00000511439 ACTL9Q8TC94 416 aa2.2□□□□□ -2.06
TOPBP1-208ENST00000511439 TCP10LQ8TDR4 215 aa2.2□□□□□ -2.06
TOPBP1-208ENST00000511439 IL22RA2Q969J5 263 aa2.2□□□□□ -2.06
TOPBP1-208ENST00000511439 ISOC2Q96AB3 205 aa2.2□□□□□ -2.06
TOPBP1-208ENST00000511439 EXOSC8Q96B26 276 aaKnown RBP2.2□□□□□ -2.06
TOPBP1-208ENST00000511439 RNF185Q96GF1 192 aa2.2□□□□□ -2.06
TOPBP1-208ENST00000511439 TSSK3Q96PN8 268 aa2.2□□□□□ -2.06
TOPBP1-208ENST00000511439 SERPINI1Q99574 410 aa2.2□□□□□ -2.06
TOPBP1-208ENST00000511439 TAPBPLQ9BX59 468 aa2.2□□□□□ -2.06
TOPBP1-208ENST00000511439 ULBP2Q9BZM5 246 aa2.2□□□□□ -2.06
TOPBP1-208ENST00000511439 SHCBP1LQ9BZQ2 653 aa2.2□□□□□ -2.06
TOPBP1-208ENST00000511439 GOLPH3Q9H4A6 298 aa2.2□□□□□ -2.06
TOPBP1-208ENST00000511439 CLN6Q9NWW5 311 aa2.2□□□□□ -2.06
TOPBP1-208ENST00000511439 UVRAGQ9P2Y5 699 aa2.2□□□□□ -2.06
TOPBP1-208ENST00000511439 XCL2Q9UBD3 114 aa2.2□□□□□ -2.06
TOPBP1-208ENST00000511439 RBMX2Q9Y388 322 aaKnown RBP2.2□□□□□ -2.06
TOPBP1-208ENST00000511439 TMED7-TICAM2A0A0A6YYA0 188 aa2.19□□□□□ -2.06
TOPBP1-208ENST00000511439 TRBV6-6A0A0A6YYG2 114 aa2.19□□□□□ -2.06
TOPBP1-208ENST00000511439 KIR2DL5BA0A0G2JN68 375 aa2.19□□□□□ -2.06
TOPBP1-208ENST00000511439 KIR2DL5BA0A0G2JPC4 375 aa2.19□□□□□ -2.06
TOPBP1-208ENST00000511439 C5orf49A4QMS7 147 aa2.19□□□□□ -2.06
TOPBP1-208ENST00000511439 LINC01619G3V211 115 aa2.19□□□□□ -2.06
TOPBP1-208ENST00000511439 NDUFB3O43676 98 aa2.19□□□□□ -2.06
TOPBP1-208ENST00000511439 GMDSO60547 372 aa2.19□□□□□ -2.06
TOPBP1-208ENST00000511439 SCN2BO60939 215 aa2.19□□□□□ -2.06
TOPBP1-208ENST00000511439 HBE1P02100 147 aa2.19□□□□□ -2.06
TOPBP1-208ENST00000511439 CD74P04233 296 aa2.19□□□□□ -2.06
TOPBP1-208ENST00000511439 ARG1P05089 322 aa2.19□□□□□ -2.06
TOPBP1-208ENST00000511439 S100A6P06703 90 aa2.19□□□□□ -2.06
TOPBP1-208ENST00000511439 GFAPP14136 432 aa2.19□□□□□ -2.06
TOPBP1-208ENST00000511439 GDI2P50395 445 aaKnown RBP2.19□□□□□ -2.06
TOPBP1-208ENST00000511439 NCBP2P52298 156 aaKnown RBP eCLIP2.19□□□□□ -2.06
TOPBP1-208ENST00000511439 AQP5P55064 265 aa2.19□□□□□ -2.06
TOPBP1-208ENST00000511439 HAMPP81172 84 aa2.19□□□□□ -2.06
TOPBP1-208ENST00000511439 RUNX1Q01196 453 aa2.19□□□□□ -2.06
TOPBP1-208ENST00000511439 PDIA2Q13087 525 aaKnown RBP2.19□□□□□ -2.06
TOPBP1-208ENST00000511439 C1DQ13901 141 aaKnown RBP2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms