RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 DHRS9Q9BPW9 319 aa1.8□□□□□ -2.12
TOPBP1-205ENST00000506779 PKIBQ9C010 78 aa1.8□□□□□ -2.12
TOPBP1-205ENST00000506779 SELENOIQ9C0D9 397 aa1.8□□□□□ -2.12
TOPBP1-205ENST00000506779 CHST6Q9GZX3 395 aa1.8□□□□□ -2.12
TOPBP1-205ENST00000506779 ALX4Q9H161 411 aaPredicted RBP1.8□□□□□ -2.12
TOPBP1-205ENST00000506779 AUNIPQ9H7T9 357 aa1.8□□□□□ -2.12
TOPBP1-205ENST00000506779 IFT46Q9NQC8 304 aa1.8□□□□□ -2.12
TOPBP1-205ENST00000506779 TMEM100Q9NV29 134 aa1.8□□□□□ -2.12
TOPBP1-205ENST00000506779 NUDT15Q9NV35 164 aa1.8□□□□□ -2.12
TOPBP1-205ENST00000506779 MCUBQ9NWR8 336 aa1.8□□□□□ -2.12
TOPBP1-205ENST00000506779 SLC2A8Q9NY64 477 aa1.8□□□□□ -2.12
TOPBP1-205ENST00000506779 RASL12Q9NYN1 266 aa1.8□□□□□ -2.12
TOPBP1-205ENST00000506779 PTTG3PQ9NZH4 202 aa1.8□□□□□ -2.12
TOPBP1-205ENST00000506779 ST3GAL6Q9Y274 331 aa1.8□□□□□ -2.12
TOPBP1-205ENST00000506779 RBMX2Q9Y388 322 aaKnown RBP1.8□□□□□ -2.12
TOPBP1-205ENST00000506779 TRIOO75962 3097 aa1.8□□□□□ -2.12
TOPBP1-205ENST00000506779 PTPRZ1P23471 2315 aaPredicted RBP1.8□□□□□ -2.12
TOPBP1-205ENST00000506779 SPTBN2O15020 2390 aa1.8□□□□□ -2.12
TOPBP1-205ENST00000506779 GPR179Q6PRD1 2367 aa1.8□□□□□ -2.12
TOPBP1-205ENST00000506779 CFAP47Q6ZTR5 3102 aa1.8□□□□□ -2.12
TOPBP1-205ENST00000506779 CACNA1HO95180 2353 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 GVINP1Q7Z2Y8 2422 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 GCN1Q92616 2671 aaKnown RBP1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 IGLV8-61A0A075B6I0 122 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 IGKV1-9A0A0C4DH69 117 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 A6NIN4 97 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 ZSCAN5BA6NJL1 495 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 H3BSH0 61 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 H3BTX0 84 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 J3QT63 122 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 LGALS8O00214 317 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 CCL21O00585 134 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 DEGS1O15121 323 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 PPIHO43447 177 aaKnown RBP1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 SSNA1O43805 119 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 TIMM8AO60220 97 aaPredicted RBP1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 SSX5O60225 188 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 CREBL2O60519 120 aaPredicted RBP1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 SMPD2O60906 423 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 NOS1APO75052 506 aaPredicted RBP1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 PDCD6O75340 191 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 B3GALNT1O75752 331 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 CCNKO75909 580 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 OR7C1O76099 320 aaPredicted RBP1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 DIRAS3O95661 229 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 RAB3DO95716 219 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 PTBP3O95758 552 aaKnown RBP1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 IL5P05113 134 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 CECR9P0C854 216 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 GSTT2P0CG29 244 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 ANXA3P12429 323 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 CCL2P13500 99 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 ZNF250P15622 560 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 SERPINA2P20848 420 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 KITLGP21583 273 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 GABRR1P24046 479 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 CFHR2P36980 270 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 CA7P43166 264 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 HAAOP46952 286 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 OR3A4PP47883 348 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 KCNJ3P48549 501 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 SRP9P49458 86 aaKnown RBP1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 FABP6P51161 128 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 IDH3GP51553 393 aaPredicted RBP1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 GPM6AP51674 278 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 TDGF1P3P51864 188 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 EFNB2P52799 333 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 RBM11P57052 281 aaKnown RBP1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 KLF3P57682 345 aaPredicted RBP1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 TAS2R31P59538 309 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 ARPC4P59998 168 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 GMFBP60983 142 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 UBE2MP61081 183 aaKnown RBP1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 FGF12P61328 243 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 RRAS2P62070 204 aaPredicted RBP1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 TSPAN5P62079 268 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 RPL8P62917 257 aaKnown RBP1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 QRFPP83859 136 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 FGL1Q08830 312 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 MAB21L1Q13394 359 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 UNC119Q13432 240 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 SURF2Q15527 256 aaPredicted RBP1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 OR8G1Q15617 311 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 PRR4Q16378 134 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 TATDN3Q17R31 274 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 LINC00303Q3SY05 128 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 FBXL19-AS1Q494R0 122 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 CHRFAM7AQ494W8 412 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 VAX1Q5SQQ9 334 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 FAM120AOSQ5T036 256 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 ASPHD2Q6ICH7 369 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 HAGHLQ6PII5 290 aaPredicted RBP1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 IDO2Q6ZQW0 420 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 SLC25A26Q70HW3 274 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 TRAPPC6BQ86SZ2 158 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 FAM58AQ8N1B3 248 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 BPIFB2Q8N4F0 458 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 ZDHHC22Q8N966 263 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 ZNF565Q8N9K5 539 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 WDR31Q8NA23 367 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms