RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 IGHV3-64A0A075B6Q5 118 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 TEX50A0A1B0GTY4 177 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 A0A1B0GW54 56 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 C5orf49A4QMS7 147 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 GOLGA6L10A6NI86 522 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 M0R381 172 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 KLRC4O43908 158 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 ATP5G1P05496 136 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 BPGMP07738 259 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 RD3LP0DJH9 198 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 HIST1H1CP16403 213 aaKnown RBP0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 PSMB8P28062 276 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 DDTP30046 118 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 MIPP30301 263 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 DAPP51397 102 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 IDH3GP51553 393 aaPredicted RBP0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 RBM11P57052 281 aaKnown RBP0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 TAS2R20P59543 309 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 TBPL1P62380 186 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 HPCAP84074 193 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 FABP5Q01469 135 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 AKR1C1Q04828 323 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 TMEM267Q0VDI3 215 aaPredicted RBP0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 PMS2P3Q13401 168 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 GNA13Q14344 377 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 MESTQ5EB52 335 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 FAM201AQ5SY85 155 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 SDHAF4Q5VUM1 108 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 TMEM42Q69YG0 159 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 CLEC6AQ6EIG7 209 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 DNM1P34Q6PK57 102 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 LYZL1Q6UWQ5 148 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 DRAM2Q6UX65 266 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 COA5Q86WW8 74 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 RPS19BP1Q86WX3 136 aaKnown RBP0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 LRRC34Q8IZ02 419 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 OR10D3Q8NH80 312 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 CLDND2Q8NHS1 167 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 RPS4Y2Q8TD47 263 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 SPACA4Q8TDM5 124 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 SMCR5Q8TEV8 140 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 PPCDCQ96CD2 204 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 CFAP53Q96M91 514 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 DHRS9Q9BPW9 319 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 DOHHQ9BU89 302 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 TIPINQ9BVW5 301 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 SLC22A4Q9H015 551 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 HES4Q9HCC6 221 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 TAAR3PQ9P1P4 343 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 KLK5Q9Y337 293 aaPredicted RBP0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 PCYT1BQ9Y5K3 369 aaPredicted RBP0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 MICAL3Q7RTP6 2002 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 TMSB15BA0A087X1C1 80 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 A0A1B0GVG6 124 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 OR6C6A6NF89 314 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 RFPL4AA6NLU0 287 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 RFPL4AL1F8VTS6 287 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 SMLR1H3BR10 107 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 CREBL2O60519 120 aaPredicted RBP0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 HPGDSO60760 199 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 BRI3O95415 125 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 NPPAP01160 153 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 IL6P05231 212 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 IL9P15248 144 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 CD40LGP29965 261 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 GRPRP30550 384 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 CA5AP35218 305 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 AKR1C3P42330 323 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 CDC34P49427 236 aaPredicted RBP0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 CDK9P50750 372 aaKnown RBP0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 FXYD7P58549 80 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 HIST1H4AP62805 103 aaKnown RBP0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 FKBP1AP62942 108 aaKnown RBP0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 SLC38A11Q08AI6 406 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 LRRC26Q2I0M4 334 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 PLPPR5Q32ZL2 321 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 OR10K2Q6IF99 312 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 PLEKHG7Q6ZR37 379 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 LRRC28Q86X40 367 aaPredicted RBP0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 CD302Q8IX05 232 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 C1orf174Q8IYL3 243 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 BOD1L2Q8IYS8 172 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 DAND5Q8N907 189 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 OR7G1Q8NGA0 311 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 OR13C8Q8NGS7 320 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 JOSD2Q8TAC2 188 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 SLC37A2Q8TED4 501 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 SLC7A6Q92536 515 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 TMA16Q96EY4 203 aaKnown RBP0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 ANKRD36BP1Q96IX9 119 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 ATP6V1G3Q96LB4 118 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 PACRGQ96M98 296 aaPredicted RBP0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 TMEM109Q9BVC6 243 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 NSRP1Q9H0G5 558 aaKnown RBP0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 CST9LQ9H4G1 147 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 SPACA1Q9HBV2 294 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 ZNHIT6Q9NWK9 470 aaKnown RBP0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 TP53TG1Q9Y2A0 90 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 POLR3HQ9Y535 204 aaPredicted RBP0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 TIMM9Q9Y5J7 89 aa0.49□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms