RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 IGHV3-64A0A075B6Q5 118 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 TEX50A0A1B0GTY4 177 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 A0A1B0GW54 56 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 C5orf49A4QMS7 147 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 GOLGA6L10A6NI86 522 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 M0R381 172 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 KLRC4O43908 158 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 ATP5G1P05496 136 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 BPGMP07738 259 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 RD3LP0DJH9 198 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 HIST1H1CP16403 213 aaKnown RBP0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 PSMB8P28062 276 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 DDTP30046 118 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 MIPP30301 263 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 DAPP51397 102 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 IDH3GP51553 393 aaPredicted RBP0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 RBM11P57052 281 aaKnown RBP0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 TAS2R20P59543 309 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 TBPL1P62380 186 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 HPCAP84074 193 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 FABP5Q01469 135 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 AKR1C1Q04828 323 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 TMEM267Q0VDI3 215 aaPredicted RBP0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 PMS2P3Q13401 168 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 GNA13Q14344 377 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 MESTQ5EB52 335 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 FAM201AQ5SY85 155 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 SDHAF4Q5VUM1 108 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 TMEM42Q69YG0 159 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 CLEC6AQ6EIG7 209 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 DNM1P34Q6PK57 102 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 LYZL1Q6UWQ5 148 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 DRAM2Q6UX65 266 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 COA5Q86WW8 74 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 RPS19BP1Q86WX3 136 aaKnown RBP0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 LRRC34Q8IZ02 419 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 OR10D3Q8NH80 312 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 CLDND2Q8NHS1 167 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 RPS4Y2Q8TD47 263 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 SPACA4Q8TDM5 124 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 SMCR5Q8TEV8 140 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 PPCDCQ96CD2 204 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 CFAP53Q96M91 514 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 DHRS9Q9BPW9 319 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 DOHHQ9BU89 302 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 TIPINQ9BVW5 301 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 SLC22A4Q9H015 551 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 HES4Q9HCC6 221 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 TAAR3PQ9P1P4 343 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 KLK5Q9Y337 293 aaPredicted RBP0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 PCYT1BQ9Y5K3 369 aaPredicted RBP0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 MICAL3Q7RTP6 2002 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 TMSB15BA0A087X1C1 80 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 A0A1B0GVG6 124 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 OR6C6A6NF89 314 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 RFPL4AA6NLU0 287 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 RFPL4AL1F8VTS6 287 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 SMLR1H3BR10 107 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 CREBL2O60519 120 aaPredicted RBP0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 HPGDSO60760 199 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 BRI3O95415 125 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 NPPAP01160 153 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 IL6P05231 212 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 IL9P15248 144 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 CD40LGP29965 261 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 GRPRP30550 384 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 CA5AP35218 305 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 AKR1C3P42330 323 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 CDC34P49427 236 aaPredicted RBP0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 CDK9P50750 372 aaKnown RBP0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 FXYD7P58549 80 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 HIST1H4AP62805 103 aaKnown RBP0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 FKBP1AP62942 108 aaKnown RBP0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 SLC38A11Q08AI6 406 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 LRRC26Q2I0M4 334 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 PLPPR5Q32ZL2 321 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 OR10K2Q6IF99 312 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 PLEKHG7Q6ZR37 379 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 LRRC28Q86X40 367 aaPredicted RBP0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 CD302Q8IX05 232 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 C1orf174Q8IYL3 243 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 BOD1L2Q8IYS8 172 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 DAND5Q8N907 189 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 OR7G1Q8NGA0 311 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 OR13C8Q8NGS7 320 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 JOSD2Q8TAC2 188 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 SLC37A2Q8TED4 501 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 SLC7A6Q92536 515 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 TMA16Q96EY4 203 aaKnown RBP0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 ANKRD36BP1Q96IX9 119 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 ATP6V1G3Q96LB4 118 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 PACRGQ96M98 296 aaPredicted RBP0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 TMEM109Q9BVC6 243 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 NSRP1Q9H0G5 558 aaKnown RBP0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 CST9LQ9H4G1 147 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 SPACA1Q9HBV2 294 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 ZNHIT6Q9NWK9 470 aaKnown RBP0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 TP53TG1Q9Y2A0 90 aa0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 POLR3HQ9Y535 204 aaPredicted RBP0.49□□□□□ -2.33
HMGB1P29-201ENST00000505659 TIMM9Q9Y5J7 89 aa0.49□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms