RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 DEFB108AA8MXU0 73 aa8.09□□□□□ -1.11
COL1A1-210ENST00000504289 CCL21O00585 134 aa8.09□□□□□ -1.11
COL1A1-210ENST00000504289 NDUFB3O43676 98 aa8.09□□□□□ -1.11
COL1A1-210ENST00000504289 HRASP01112 189 aa8.09□□□□□ -1.11
COL1A1-210ENST00000504289 MBP02144 154 aa8.09□□□□□ -1.11
COL1A1-210ENST00000504289 GYPAP02724 150 aa8.09□□□□□ -1.11
COL1A1-210ENST00000504289 TFF1P04155 84 aa8.09□□□□□ -1.11
COL1A1-210ENST00000504289 IGHV3-43DP0DP04 118 aa8.09□□□□□ -1.11
COL1A1-210ENST00000504289 MRPS11P82912 194 aaKnown RBP8.09□□□□□ -1.11
COL1A1-210ENST00000504289 DEFA5Q01523 94 aa8.09□□□□□ -1.11
COL1A1-210ENST00000504289 ZNF616Q08AN1 781 aa8.09□□□□□ -1.11
COL1A1-210ENST00000504289 VWC2Q2TAL6 325 aa8.09□□□□□ -1.11
COL1A1-210ENST00000504289 LRRC10Q5BKY1 277 aa8.09□□□□□ -1.11
COL1A1-210ENST00000504289 CT45A1Q5HYN5 189 aa8.09□□□□□ -1.11
COL1A1-210ENST00000504289 SP5Q6BEB4 398 aaPredicted RBP8.09□□□□□ -1.11
COL1A1-210ENST00000504289 SLC25A24Q6NUK1 477 aa8.09□□□□□ -1.11
COL1A1-210ENST00000504289 ADAM5Q6NVV9 412 aa8.09□□□□□ -1.11
COL1A1-210ENST00000504289 BTNL3Q6UXE8 466 aa8.09□□□□□ -1.11
COL1A1-210ENST00000504289 CLEC9AQ6UXN8 241 aa8.09□□□□□ -1.11
COL1A1-210ENST00000504289 TMEM182Q6ZP80 229 aaPredicted RBP8.09□□□□□ -1.11
COL1A1-210ENST00000504289 LILRB2Q8N423 598 aa8.09□□□□□ -1.11
COL1A1-210ENST00000504289 LINC00311Q8N616 119 aa8.09□□□□□ -1.11
COL1A1-210ENST00000504289 TMEM217Q8N7C4 229 aa8.09□□□□□ -1.11
COL1A1-210ENST00000504289 CT45A3Q8NHU0 189 aa8.09□□□□□ -1.11
COL1A1-210ENST00000504289 DTD1Q8TEA8 209 aa8.09□□□□□ -1.11
COL1A1-210ENST00000504289 PLPPR2Q96GM1 343 aa8.09□□□□□ -1.11
COL1A1-210ENST00000504289 TMEM147Q9BVK8 224 aa8.09□□□□□ -1.11
COL1A1-210ENST00000504289 NKX6-2Q9C056 277 aaPredicted RBP8.09□□□□□ -1.11
COL1A1-210ENST00000504289 SH3BGRL3Q9H299 93 aa8.09□□□□□ -1.11
COL1A1-210ENST00000504289 KIAA1456Q9P272 454 aa8.09□□□□□ -1.11
COL1A1-210ENST00000504289 SLC25A10Q9UBX3 287 aaPredicted RBP8.09□□□□□ -1.11
COL1A1-210ENST00000504289 BOD1L1Q8NFC6 3051 aa8.09□□□□□ -1.11
COL1A1-210ENST00000504289 PKD1L2Q7Z442 2459 aa8.08□□□□□ -1.12
COL1A1-210ENST00000504289 TANC2Q9HCD6 1990 aa8.08□□□□□ -1.12
COL1A1-210ENST00000504289 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.08□□□□□ -1.12
COL1A1-210ENST00000504289 FAM157AC9JC47 383 aa8.08□□□□□ -1.12
COL1A1-210ENST00000504289 TMPRSS2O15393 492 aa8.08□□□□□ -1.12
COL1A1-210ENST00000504289 FCGR3BO75015 233 aa8.08□□□□□ -1.12
COL1A1-210ENST00000504289 MPDU1O75352 247 aa8.08□□□□□ -1.12
COL1A1-210ENST00000504289 H2AFB1P0C5Y9 115 aa8.08□□□□□ -1.12
COL1A1-210ENST00000504289 IAPPP10997 89 aa8.08□□□□□ -1.12
COL1A1-210ENST00000504289 TAGLN2P37802 199 aaKnown RBP8.08□□□□□ -1.12
COL1A1-210ENST00000504289 PPOXP50336 477 aa8.08□□□□□ -1.12
COL1A1-210ENST00000504289 ZNF134P52741 427 aa8.08□□□□□ -1.12
COL1A1-210ENST00000504289 RPL31P62899 125 aaKnown RBP8.08□□□□□ -1.12
COL1A1-210ENST00000504289 HOXA4Q00056 320 aaPredicted RBP8.08□□□□□ -1.12
COL1A1-210ENST00000504289 SLC38A11Q08AI6 406 aa8.08□□□□□ -1.12
COL1A1-210ENST00000504289 GUK1Q16774 197 aa8.08□□□□□ -1.12
COL1A1-210ENST00000504289 SPANXN5Q5MJ07 72 aa8.08□□□□□ -1.12
COL1A1-210ENST00000504289 TCF23Q7RTU1 214 aa8.08□□□□□ -1.12
COL1A1-210ENST00000504289 FAM216BQ8N7L0 139 aa8.08□□□□□ -1.12
COL1A1-210ENST00000504289 DEFB108BQ8NET1 73 aa8.08□□□□□ -1.12
COL1A1-210ENST00000504289 OR10P1Q8NGE3 313 aa8.08□□□□□ -1.12
COL1A1-210ENST00000504289 OR4A16Q8NH70 328 aa8.08□□□□□ -1.12
COL1A1-210ENST00000504289 FAM213BQ8TBF2 198 aa8.08□□□□□ -1.12
COL1A1-210ENST00000504289 MBD3L1Q8WWY6 194 aa8.08□□□□□ -1.12
COL1A1-210ENST00000504289 ZNF714Q96N38 554 aa8.08□□□□□ -1.12
COL1A1-210ENST00000504289 TMEM204Q9BSN7 226 aa8.08□□□□□ -1.12
COL1A1-210ENST00000504289 SCRT1Q9BWW7 348 aa8.08□□□□□ -1.12
COL1A1-210ENST00000504289 WDR61Q9GZS3 305 aaKnown RBP8.08□□□□□ -1.12
COL1A1-210ENST00000504289 ANKHD1Q8IWZ3 2542 aaKnown RBP8.07□□□□□ -1.12
COL1A1-210ENST00000504289 A0A087X0M5 115 aa8.07□□□□□ -1.12
COL1A1-210ENST00000504289 IGHV1-69-2A0A0G2JMI3 117 aa8.07□□□□□ -1.12
COL1A1-210ENST00000504289 A0A1B0GX30 115 aa8.07□□□□□ -1.12
COL1A1-210ENST00000504289 TMEM8BA6NDV4 472 aa8.07□□□□□ -1.12
COL1A1-210ENST00000504289 CEBPZOSA8MTT3 80 aa8.07□□□□□ -1.12
COL1A1-210ENST00000504289 RBP4P02753 201 aa8.07□□□□□ -1.12
COL1A1-210ENST00000504289 ARG1P05089 322 aa8.07□□□□□ -1.12
COL1A1-210ENST00000504289 SFTA3P0C7M3 94 aa8.07□□□□□ -1.12
COL1A1-210ENST00000504289 METTL15P1P0C7V9 234 aa8.07□□□□□ -1.12
COL1A1-210ENST00000504289 NDUFB7P17568 137 aa8.07□□□□□ -1.12
COL1A1-210ENST00000504289 TMEM267Q0VDI3 215 aaPredicted RBP8.07□□□□□ -1.12
COL1A1-210ENST00000504289 BTN1A1Q13410 526 aa8.07□□□□□ -1.12
COL1A1-210ENST00000504289 ZNF273Q14593 569 aa8.07□□□□□ -1.12
COL1A1-210ENST00000504289 RTL8BQ17RB0 113 aa8.07□□□□□ -1.12
COL1A1-210ENST00000504289 IZUMO4Q1ZYL8 232 aa8.07□□□□□ -1.12
COL1A1-210ENST00000504289 HFEQ30201 348 aa8.07□□□□□ -1.12
COL1A1-210ENST00000504289 FAM201AQ5SY85 155 aa8.07□□□□□ -1.12
COL1A1-210ENST00000504289 PRAMEF5Q5TYX0 476 aa8.07□□□□□ -1.12
COL1A1-210ENST00000504289 THNSL2Q86YJ6 484 aa8.07□□□□□ -1.12
COL1A1-210ENST00000504289 OR10G4Q8NGN3 311 aa8.07□□□□□ -1.12
COL1A1-210ENST00000504289 TAF15Q92804 592 aaKnown RBP eCLIP8.07□□□□□ -1.12
COL1A1-210ENST00000504289 TNFRSF14Q92956 283 aa8.07□□□□□ -1.12
COL1A1-210ENST00000504289 SLC35B3Q9H1N7 401 aa8.07□□□□□ -1.12
COL1A1-210ENST00000504289 PRORYQ9H606 182 aa8.07□□□□□ -1.12
COL1A1-210ENST00000504289 FKBP11Q9NYL4 201 aa8.07□□□□□ -1.12
COL1A1-210ENST00000504289 FOXA2Q9Y261 457 aaPredicted RBP8.07□□□□□ -1.12
COL1A1-210ENST00000504289 ZNF257Q9Y2Q1 563 aa8.07□□□□□ -1.12
COL1A1-210ENST00000504289 FBXO7Q9Y3I1 522 aa8.07□□□□□ -1.12
COL1A1-210ENST00000504289 SAA2-SAA4A0A096LPE2 208 aa8.06□□□□□ -1.12
COL1A1-210ENST00000504289 A0A1W2PPH5 198 aa8.06□□□□□ -1.12
COL1A1-210ENST00000504289 C15orf61A6NNL5 157 aa8.06□□□□□ -1.12
COL1A1-210ENST00000504289 PMS2P5A8MQ11 134 aa8.06□□□□□ -1.12
COL1A1-210ENST00000504289 FNDC10F2Z333 226 aa8.06□□□□□ -1.12
COL1A1-210ENST00000504289 C17orf112F2Z3M2 114 aa8.06□□□□□ -1.12
COL1A1-210ENST00000504289 H3BP45 60 aa8.06□□□□□ -1.12
COL1A1-210ENST00000504289 RBMXL2O75526 392 aaKnown RBP8.06□□□□□ -1.12
COL1A1-210ENST00000504289 SCO1O75880 301 aa8.06□□□□□ -1.12
COL1A1-210ENST00000504289 HSPB1P04792 205 aaKnown RBP8.06□□□□□ -1.12
COL1A1-210ENST00000504289 IL6RP08887 468 aaPredicted RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms