RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 TMEM56Q96MV1 263 aa2.37□□□□□ -2.03
NEDD4-204ENST00000503468 TAAR6Q96RI8 345 aa2.37□□□□□ -2.03
NEDD4-204ENST00000503468 RSG1Q9BU20 258 aa2.37□□□□□ -2.03
NEDD4-204ENST00000503468 TMEM56-RWDD3S4R434 201 aa2.37□□□□□ -2.03
NEDD4-204ENST00000503468 DNAH17Q9UFH2 4485 aa2.37□□□□□ -2.03
NEDD4-204ENST00000503468 SLC33A1O00400 549 aaPredicted RBP2.37□□□□□ -2.03
NEDD4-204ENST00000503468 CCL25O15444 150 aa2.37□□□□□ -2.03
NEDD4-204ENST00000503468 ZNF217O75362 1048 aa2.37□□□□□ -2.03
NEDD4-204ENST00000503468 USF1P22415 310 aaPredicted RBP2.37□□□□□ -2.03
NEDD4-204ENST00000503468 PTGER4P35408 488 aa2.37□□□□□ -2.03
NEDD4-204ENST00000503468 APLNRP35414 380 aa2.37□□□□□ -2.03
NEDD4-204ENST00000503468 IL11RAQ14626 422 aa2.37□□□□□ -2.03
NEDD4-204ENST00000503468 PRSS57Q6UWY2 283 aa2.37□□□□□ -2.03
NEDD4-204ENST00000503468 C9orf139Q6ZV77 190 aa2.37□□□□□ -2.03
NEDD4-204ENST00000503468 SAXO1Q8IYX7 474 aa2.37□□□□□ -2.03
NEDD4-204ENST00000503468 ZNF808Q8N4W9 903 aaPredicted RBP2.37□□□□□ -2.03
NEDD4-204ENST00000503468 ZBTB34Q8NCN2 500 aa2.37□□□□□ -2.03
NEDD4-204ENST00000503468 BHLHE23Q8NDY6 225 aa2.37□□□□□ -2.03
NEDD4-204ENST00000503468 VN1R17PQ8TDU5 208 aa2.37□□□□□ -2.03
NEDD4-204ENST00000503468 WNT2BQ93097 391 aa2.37□□□□□ -2.03
NEDD4-204ENST00000503468 DGAT2Q96PD7 388 aa2.37□□□□□ -2.03
NEDD4-204ENST00000503468 TMEM222Q9H0R3 208 aa2.37□□□□□ -2.03
NEDD4-204ENST00000503468 NPVFQ9HCQ7 196 aa2.37□□□□□ -2.03
NEDD4-204ENST00000503468 OBP2BQ9NPH6 170 aa2.37□□□□□ -2.03
NEDD4-204ENST00000503468 SLC7A10Q9NS82 523 aa2.37□□□□□ -2.03
NEDD4-204ENST00000503468 ZNF319Q9P2F9 582 aa2.37□□□□□ -2.03
NEDD4-204ENST00000503468 KAAG1Q9UBP8 84 aa2.37□□□□□ -2.03
NEDD4-204ENST00000503468 SPTAN1Q13813 2472 aaKnown RBP2.37□□□□□ -2.03
NEDD4-204ENST00000503468 A0A1W2PPV4 95 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 C17orf105B2RV13 164 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 FTH1P19P0C7X4 201 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 FABP2P12104 132 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 PTNP21246 168 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 GRB2P62993 217 aaKnown RBP2.36□□□□□ -2.03
NEDD4-204ENST00000503468 RUNX3Q13761 415 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 ANKRD55Q3KP44 614 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 KRTAP21-3Q3LHN1 58 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 CD300EQ496F6 205 aaPredicted RBP2.36□□□□□ -2.03
NEDD4-204ENST00000503468 EYSQ5T1H1 3165 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 GLIPR1L1Q6UWM5 242 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 APRG1Q8IVJ8 170 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 INTS1Q8N201 2190 aaKnown RBP2.36□□□□□ -2.03
NEDD4-204ENST00000503468 STPG4Q8N801 248 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 OR4X2Q8NGF9 303 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 ASB10Q8WXI3 467 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 OR5P3Q8WZ94 311 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 MED12Q93074 2177 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 MRAP2Q96G30 205 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 TMEM147Q9BVK8 224 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 MEGF9Q9H1U4 602 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 ZNF665Q9H7R5 613 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 NRN1Q9NPD7 142 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 KLK13Q9UKR3 277 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 CFAP47Q6ZTR5 3102 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 CELSR1Q9NYQ6 3014 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 TRAV27A0A087WT01 109 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 CD300LBA8K4G0 201 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 ZNF850A8MQ14 1090 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 PRSS46E5RG02 174 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 FCN1O00602 326 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 PHF1O43189 567 aaPredicted RBP2.36□□□□□ -2.03
NEDD4-204ENST00000503468 SYNGR2O43760 224 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 HYPMO75409 117 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 NAPSAO96009 420 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 HLA-DOBP13765 273 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 SELEP16581 610 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 OR1D4P47884 311 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 COMPP49747 757 aaPredicted RBP2.36□□□□□ -2.03
NEDD4-204ENST00000503468 EFNB2P52799 333 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 KRTDAPP60985 99 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 SPATA45Q537H7 98 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 OR4N5Q8IXE1 308 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 NKD1Q969G9 470 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 RTBDNQ9BSG5 229 aaPredicted RBP2.36□□□□□ -2.03
NEDD4-204ENST00000503468 TMEM70Q9BUB7 260 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 C19orf24Q9BVV8 132 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 OSTCQ9NRP0 149 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 UNC13CQ8NB66 2214 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 ARFGEF3Q5TH69 2177 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 PRSS37A4D1T9 235 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 ZNF716A6NP11 495 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 PDCD6O75340 191 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 VAMP5O95183 116 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 HBZP02008 142 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 TMIGD3P0DMS9 266 aaPredicted RBP2.36□□□□□ -2.03
NEDD4-204ENST00000503468 GP1BBP13224 206 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 CTRLP40313 264 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 KIR2DL2P43627 348 aaPredicted RBP2.36□□□□□ -2.03
NEDD4-204ENST00000503468 SLC22A6Q4U2R8 563 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 TMEM97Q5BJF2 176 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 Q5PR19 223 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 Q6ZS92 163 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 FAM57BQ71RH2 274 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 TMEM251Q8N6I4 163 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 FER1L6-AS1Q8NA97 138 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 GATD1Q8NB37 220 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 ZNF439Q8NDP4 499 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 OR1K1Q8NGR3 316 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 SCAMP4Q969E2 229 aa2.36□□□□□ -2.03
NEDD4-204ENST00000503468 ERGIC1Q969X5 290 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms