RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 IQCJQ1A5X6 159 aa9.74□□□□□ -0.85
SNRNP200-208ENST00000497539 SPIN3Q5JUX0 258 aa9.74□□□□□ -0.85
SNRNP200-208ENST00000497539 GPR157Q5UAW9 335 aa9.74□□□□□ -0.85
SNRNP200-208ENST00000497539 SPSB3Q6PJ21 355 aa9.74□□□□□ -0.85
SNRNP200-208ENST00000497539 MOB1BQ7L9L4 216 aa9.74□□□□□ -0.85
SNRNP200-208ENST00000497539 CYB561D1Q8N8Q1 229 aa9.74□□□□□ -0.85
SNRNP200-208ENST00000497539 OR10W1Q8NGF6 305 aa9.74□□□□□ -0.85
SNRNP200-208ENST00000497539 MRPL30Q8TCC3 161 aaKnown RBP9.74□□□□□ -0.85
SNRNP200-208ENST00000497539 KLF14Q8TD94 323 aaPredicted RBP9.74□□□□□ -0.85
SNRNP200-208ENST00000497539 TMEM171Q8WVE6 324 aa9.74□□□□□ -0.85
SNRNP200-208ENST00000497539 C18orf12Q96KH6 178 aa9.74□□□□□ -0.85
SNRNP200-208ENST00000497539 CABLES2Q9BTV7 478 aa9.74□□□□□ -0.85
SNRNP200-208ENST00000497539 STRAPQ9Y3F4 350 aaKnown RBP9.74□□□□□ -0.85
SNRNP200-208ENST00000497539 TRAV24A0A0B4J272 114 aa9.73□□□□□ -0.85
SNRNP200-208ENST00000497539 HSD17B6O14756 317 aa9.73□□□□□ -0.85
SNRNP200-208ENST00000497539 ZNHIT1O43257 154 aa9.73□□□□□ -0.85
SNRNP200-208ENST00000497539 NDUFB8O95169 186 aa9.73□□□□□ -0.85
SNRNP200-208ENST00000497539 ZNF146Q15072 292 aa9.73□□□□□ -0.85
SNRNP200-208ENST00000497539 ZNF429Q86V71 674 aa9.73□□□□□ -0.85
SNRNP200-208ENST00000497539 SCCPDHQ8NBX0 429 aa9.73□□□□□ -0.85
SNRNP200-208ENST00000497539 OR4S2Q8NH73 311 aa9.73□□□□□ -0.85
SNRNP200-208ENST00000497539 ATP23Q9Y6H3 246 aa9.73□□□□□ -0.85
SNRNP200-208ENST00000497539 IGHV2OR16-5A0A0B4J2B6 119 aa9.73□□□□□ -0.85
SNRNP200-208ENST00000497539 IGHV1-18A0A0C4DH31 117 aa9.73□□□□□ -0.85
SNRNP200-208ENST00000497539 SSSCA1O60232 199 aa9.73□□□□□ -0.85
SNRNP200-208ENST00000497539 RAMP3O60896 148 aa9.73□□□□□ -0.85
SNRNP200-208ENST00000497539 GNMTQ14749 295 aa9.73□□□□□ -0.85
SNRNP200-208ENST00000497539 CXorf66Q5JRM2 361 aaPredicted RBP9.73□□□□□ -0.85
SNRNP200-208ENST00000497539 TIMM23BQ5SRD1 257 aa9.73□□□□□ -0.85
SNRNP200-208ENST00000497539 SPATA46Q5T0L3 261 aa9.73□□□□□ -0.85
SNRNP200-208ENST00000497539 ZNF705AQ6ZN79 300 aaPredicted RBP9.73□□□□□ -0.85
SNRNP200-208ENST00000497539 OR4D5Q8NGN0 318 aa9.73□□□□□ -0.85
SNRNP200-208ENST00000497539 MIEN1Q9BRT3 115 aa9.73□□□□□ -0.85
SNRNP200-208ENST00000497539 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.72□□□□□ -0.85
SNRNP200-208ENST00000497539 K7EM74 188 aa9.72□□□□□ -0.85
SNRNP200-208ENST00000497539 K7ERU9 68 aa9.72□□□□□ -0.85
SNRNP200-208ENST00000497539 CDIPTO14735 213 aa9.72□□□□□ -0.85
SNRNP200-208ENST00000497539 OR4A8P0C604 315 aa9.72□□□□□ -0.85
SNRNP200-208ENST00000497539 MPV17P39210 176 aa9.72□□□□□ -0.85
SNRNP200-208ENST00000497539 PRAMEF5Q5TYX0 476 aa9.72□□□□□ -0.85
SNRNP200-208ENST00000497539 PRAMEF6Q5VXH4 476 aa9.72□□□□□ -0.85
SNRNP200-208ENST00000497539 TMEM183AQ8IXX5 376 aa9.72□□□□□ -0.85
SNRNP200-208ENST00000497539 OR2C3Q8N628 320 aa9.72□□□□□ -0.85
SNRNP200-208ENST00000497539 CCDC71LQ8N9Z2 235 aa9.72□□□□□ -0.85
SNRNP200-208ENST00000497539 CXXC4Q9H2H0 198 aa9.72□□□□□ -0.85
SNRNP200-208ENST00000497539 CHODLQ9H9P2 273 aa9.72□□□□□ -0.85
SNRNP200-208ENST00000497539 IL36RNQ9UBH0 155 aa9.72□□□□□ -0.85
SNRNP200-208ENST00000497539 SRP19P09132 144 aaKnown RBP9.72□□□□□ -0.85
SNRNP200-208ENST00000497539 AADACP22760 399 aa9.72□□□□□ -0.85
SNRNP200-208ENST00000497539 FAM180AQ6UWF9 173 aa9.72□□□□□ -0.85
SNRNP200-208ENST00000497539 LGI3Q8N145 548 aa9.72□□□□□ -0.85
SNRNP200-208ENST00000497539 GBGT1Q8N5D6 347 aa9.72□□□□□ -0.85
SNRNP200-208ENST00000497539 OR5C1Q8NGR4 320 aa9.72□□□□□ -0.85
SNRNP200-208ENST00000497539 C20orf144Q9BQM9 153 aa9.72□□□□□ -0.85
SNRNP200-208ENST00000497539 RNF150Q9ULK6 438 aa9.72□□□□□ -0.85
SNRNP200-208ENST00000497539 MUC6Q6W4X9 2439 aa9.72□□□□□ -0.85
SNRNP200-208ENST00000497539 A0A0U1RQK1 487 aa9.71□□□□□ -0.85
SNRNP200-208ENST00000497539 A0A1W2PR80 420 aa9.71□□□□□ -0.85
SNRNP200-208ENST00000497539 ZNF320A2RRD8 509 aa9.71□□□□□ -0.85
SNRNP200-208ENST00000497539 PPYP01298 95 aa9.71□□□□□ -0.85
SNRNP200-208ENST00000497539 CRYBA4P53673 196 aa9.71□□□□□ -0.85
SNRNP200-208ENST00000497539 MZT1Q08AG7 82 aa9.71□□□□□ -0.85
SNRNP200-208ENST00000497539 ZNF154Q13106 437 aa9.71□□□□□ -0.85
SNRNP200-208ENST00000497539 ZNF474Q6S9Z5 364 aaPredicted RBP9.71□□□□□ -0.85
SNRNP200-208ENST00000497539 CACNG8Q8WXS5 425 aa9.71□□□□□ -0.85
SNRNP200-208ENST00000497539 TRAV30A0A087WSZ9 112 aa9.71□□□□□ -0.86
SNRNP200-208ENST00000497539 K7ENP7 123 aa9.71□□□□□ -0.86
SNRNP200-208ENST00000497539 AGFG2O95081 481 aa9.71□□□□□ -0.86
SNRNP200-208ENST00000497539 TFPI2P48307 235 aa9.71□□□□□ -0.86
SNRNP200-208ENST00000497539 SRPXP78539 464 aa9.71□□□□□ -0.86
SNRNP200-208ENST00000497539 ICAM4Q14773 271 aa9.71□□□□□ -0.86
SNRNP200-208ENST00000497539 SPACA3Q8IXA5 215 aa9.71□□□□□ -0.86
SNRNP200-208ENST00000497539 C11orf53Q8IXP5 236 aa9.71□□□□□ -0.86
SNRNP200-208ENST00000497539 PRR7Q8TB68 274 aa9.71□□□□□ -0.86
SNRNP200-208ENST00000497539 ABHD5Q8WTS1 349 aa9.71□□□□□ -0.86
SNRNP200-208ENST00000497539 DPF1Q92782 380 aa9.71□□□□□ -0.86
SNRNP200-208ENST00000497539 TBL2Q9Y4P3 447 aaKnown RBP9.71□□□□□ -0.86
SNRNP200-208ENST00000497539 DEGS1O15121 323 aa9.7□□□□□ -0.86
SNRNP200-208ENST00000497539 MLNRO43193 412 aa9.7□□□□□ -0.86
SNRNP200-208ENST00000497539 TRGC1P0CF51 173 aa9.7□□□□□ -0.86
SNRNP200-208ENST00000497539 DYNLT3P51808 116 aa9.7□□□□□ -0.86
SNRNP200-208ENST00000497539 HERV-K104P61576 105 aa9.7□□□□□ -0.86
SNRNP200-208ENST00000497539 HLA-DRB3P79483 266 aa9.7□□□□□ -0.86
SNRNP200-208ENST00000497539 ALKBH6Q3KRA9 238 aa9.7□□□□□ -0.86
SNRNP200-208ENST00000497539 ZNF718Q3SXZ3 478 aa9.7□□□□□ -0.86
SNRNP200-208ENST00000497539 ZNF497Q6ZNH5 498 aa9.7□□□□□ -0.86
SNRNP200-208ENST00000497539 LFNGQ8NES3 379 aa9.7□□□□□ -0.86
SNRNP200-208ENST00000497539 OR4C5Q8NGB2 326 aa9.7□□□□□ -0.86
SNRNP200-208ENST00000497539 ZNF835Q9Y2P0 537 aa9.7□□□□□ -0.86
SNRNP200-208ENST00000497539 MSRB2Q9Y3D2 182 aa9.7□□□□□ -0.86
SNRNP200-208ENST00000497539 WSB1Q9Y6I7 421 aa9.7□□□□□ -0.86
SNRNP200-208ENST00000497539 TMEM50AO95807 157 aa9.7□□□□□ -0.86
SNRNP200-208ENST00000497539 PLA2G5P39877 138 aa9.7□□□□□ -0.86
SNRNP200-208ENST00000497539 NKX2-1P43699 371 aaPredicted RBP9.7□□□□□ -0.86
SNRNP200-208ENST00000497539 TLE1Q04724 770 aa9.7□□□□□ -0.86
SNRNP200-208ENST00000497539 ADIPOQQ15848 244 aa9.7□□□□□ -0.86
SNRNP200-208ENST00000497539 TBR1Q16650 682 aa9.7□□□□□ -0.86
SNRNP200-208ENST00000497539 MORN2Q502X0 79 aa9.7□□□□□ -0.86
SNRNP200-208ENST00000497539 COA6Q5JTJ3 125 aaKnown RBP9.7□□□□□ -0.86
SNRNP200-208ENST00000497539 SSX8Q7RTT4 187 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms