RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 SLC2A6Q9UGQ3 507 aa2.56□□□□□ -2
SNRNP48-202ENST00000496946 POLR1DQ9Y2S0 133 aa2.56□□□□□ -2
SNRNP48-202ENST00000496946 MYO18AQ92614 2054 aaKnown RBP2.56□□□□□ -2
SNRNP48-202ENST00000496946 TRBV24-1A0A075B6N3 115 aa2.56□□□□□ -2
SNRNP48-202ENST00000496946 C15orf61A6NNL5 157 aa2.56□□□□□ -2
SNRNP48-202ENST00000496946 CA2P00918 260 aa2.56□□□□□ -2
SNRNP48-202ENST00000496946 CD8AP01732 235 aa2.56□□□□□ -2
SNRNP48-202ENST00000496946 HBE1P02100 147 aa2.56□□□□□ -2
SNRNP48-202ENST00000496946 FCGR3AP08637 254 aa2.56□□□□□ -2
SNRNP48-202ENST00000496946 TACSTD2P09758 323 aa2.56□□□□□ -2
SNRNP48-202ENST00000496946 LINC00032P0C843 101 aa2.56□□□□□ -2
SNRNP48-202ENST00000496946 IGLC6P0CF74 106 aa2.56□□□□□ -2
SNRNP48-202ENST00000496946 CRYBB3P26998 211 aa2.56□□□□□ -2
SNRNP48-202ENST00000496946 BTCP35070 178 aa2.56□□□□□ -2
SNRNP48-202ENST00000496946 DLX1P56177 255 aa2.56□□□□□ -2
SNRNP48-202ENST00000496946 C1DQ13901 141 aaKnown RBP2.56□□□□□ -2
SNRNP48-202ENST00000496946 ATXN7L3Q14CW9 347 aaPredicted RBP2.56□□□□□ -2
SNRNP48-202ENST00000496946 Q6AWC8 147 aa2.56□□□□□ -2
SNRNP48-202ENST00000496946 Q6Q795 121 aa2.56□□□□□ -2
SNRNP48-202ENST00000496946 SLC25A48Q6ZT89 311 aaKnown RBP2.56□□□□□ -2
SNRNP48-202ENST00000496946 LRP11Q86VZ4 500 aa2.56□□□□□ -2
SNRNP48-202ENST00000496946 OOSP2Q86WS3 158 aa2.56□□□□□ -2
SNRNP48-202ENST00000496946 MMD2Q8IY49 270 aa2.56□□□□□ -2
SNRNP48-202ENST00000496946 METTL27Q8N6F8 245 aaPredicted RBP2.56□□□□□ -2
SNRNP48-202ENST00000496946 OR10G6Q8NH81 332 aa2.56□□□□□ -2
SNRNP48-202ENST00000496946 UBE2E3Q969T4 207 aa2.56□□□□□ -2
SNRNP48-202ENST00000496946 TSACCQ96A04 125 aaPredicted RBP2.56□□□□□ -2
SNRNP48-202ENST00000496946 STARD4Q96DR4 205 aa2.56□□□□□ -2
SNRNP48-202ENST00000496946 LINC01587Q99440 93 aa2.56□□□□□ -2
SNRNP48-202ENST00000496946 KIR2DL4Q99706 377 aa2.56□□□□□ -2
SNRNP48-202ENST00000496946 MRPL32Q9BYC8 188 aaKnown RBP2.56□□□□□ -2
SNRNP48-202ENST00000496946 SMDT1Q9H4I9 107 aa2.56□□□□□ -2
SNRNP48-202ENST00000496946 C5orf66Q9H5L9 145 aa2.56□□□□□ -2
SNRNP48-202ENST00000496946 JPT2Q9H910 190 aa2.56□□□□□ -2
SNRNP48-202ENST00000496946 UBE2TQ9NPD8 197 aaPredicted RBP2.56□□□□□ -2
SNRNP48-202ENST00000496946 PNRC2Q9NPJ4 139 aaKnown RBP2.56□□□□□ -2
SNRNP48-202ENST00000496946 MDFICQ9P1T7 246 aa2.56□□□□□ -2
SNRNP48-202ENST00000496946 LINC00312Q9Y6C7 94 aa2.56□□□□□ -2
SNRNP48-202ENST00000496946 USP54Q70EL1 1684 aa2.56□□□□□ -2
SNRNP48-202ENST00000496946 LOXHD1Q8IVV2 1947 aa2.56□□□□□ -2
SNRNP48-202ENST00000496946 ARAP2Q8WZ64 1704 aa2.56□□□□□ -2
SNRNP48-202ENST00000496946 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP2.55□□□□□ -2
SNRNP48-202ENST00000496946 A0A1W2PP11 408 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 EEF1E1-BLOC1S5C9J1V9 151 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 EEF1E1O43324 174 aaKnown RBP2.55□□□□□ -2
SNRNP48-202ENST00000496946 STK17BO94768 372 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 DUS4LO95620 317 aaKnown RBP2.55□□□□□ -2
SNRNP48-202ENST00000496946 LSM8O95777 96 aaKnown RBP2.55□□□□□ -2
SNRNP48-202ENST00000496946 ZNF708P17019 499 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 GLIPR1P48060 266 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 YPEL3P61236 119 aaPredicted RBP2.55□□□□□ -2
SNRNP48-202ENST00000496946 RPS4XP62701 263 aaKnown RBP2.55□□□□□ -2
SNRNP48-202ENST00000496946 SLC38A11Q08AI6 406 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 FAM27E3Q08E93 113 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 LAMTOR4Q0VGL1 99 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 KLF5Q13887 457 aaPredicted RBP2.55□□□□□ -2
SNRNP48-202ENST00000496946 GGTLC2Q14390 218 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 HES1Q14469 280 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 PHLDA2Q53GA4 152 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 UBE2NLQ5JXB2 153 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 FAM27D1Q5T7N8 215 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 BCDIN3DQ7Z5W3 292 aaKnown RBP2.55□□□□□ -2
SNRNP48-202ENST00000496946 VKORC1L1Q8N0U8 176 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 ZFP62Q8NB50 900 aaPredicted RBP2.55□□□□□ -2
SNRNP48-202ENST00000496946 OR11H6Q8NGC7 330 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 OR5D14Q8NGL3 314 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 OR1L3Q8NH93 324 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 ARPC1AQ92747 370 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 PLEKHB2Q96CS7 222 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 PGLYRP3Q96LB9 341 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 ST20Q9HBF5 79 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 TRMT112Q9UI30 125 aaKnown RBP2.55□□□□□ -2
SNRNP48-202ENST00000496946 MED31Q9Y3C7 131 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 HEBP2Q9Y5Z4 205 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 ADGBQ8N7X0 1667 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 TULP4Q9NRJ4 1543 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 FER1L6Q2WGJ9 1857 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 PCSK5Q92824 1860 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 PXDNLA1KZ92 1463 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 COL11A2P13942 1736 aaPredicted RBP2.55□□□□□ -2
SNRNP48-202ENST00000496946 TIAM1Q13009 1591 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 DIP2CQ9Y2E4 1556 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 TRAV5A0A0B4J249 113 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 LOC105378220A0A1B0GUY1 285 aaPredicted RBP2.55□□□□□ -2
SNRNP48-202ENST00000496946 NAP1L6A6NFF2 107 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 ZNF860A6NHJ4 632 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 OR4C45A6NMZ5 311 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 RIIAD1A6NNX1 92 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 GGTLC3B5MD39 225 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 K7EQS6 105 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 ARPC2O15144 300 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 RAMP1O60894 148 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 KLF7O75840 302 aaPredicted RBP2.55□□□□□ -2
SNRNP48-202ENST00000496946 NDUFC2O95298 119 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 CXorf1O96002 111 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 MT-ATP8P03928 68 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 SLC25A4P12235 298 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 SLC25A6P12236 298 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 GPX3P22352 226 aa2.55□□□□□ -2
SNRNP48-202ENST00000496946 PPIBP23284 216 aaKnown RBP2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms