RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 KIR2DS2P43631 304 aa10.73□□□□□ -0.69
VARS-228ENST00000495010 SERPINB10P48595 397 aa10.73□□□□□ -0.69
VARS-228ENST00000495010 TMEM177Q53S58 311 aa10.73□□□□□ -0.69
VARS-228ENST00000495010 LRRTM1Q86UE6 522 aa10.73□□□□□ -0.69
VARS-228ENST00000495010 PQLC1Q8N2U9 271 aa10.73□□□□□ -0.69
VARS-228ENST00000495010 MS4A15Q8N5U1 240 aa10.73□□□□□ -0.69
VARS-228ENST00000495010 TEX45Q8NA69 505 aa10.73□□□□□ -0.69
VARS-228ENST00000495010 SRSF12Q8WXF0 261 aaKnown RBP10.73□□□□□ -0.69
VARS-228ENST00000495010 PHYHIPQ92561 330 aa10.73□□□□□ -0.69
VARS-228ENST00000495010 WDR89Q96FK6 387 aaPredicted RBP10.73□□□□□ -0.69
VARS-228ENST00000495010 GGTLC1Q9BX51 225 aa10.73□□□□□ -0.69
VARS-228ENST00000495010 LPAR5Q9H1C0 372 aa10.73□□□□□ -0.69
VARS-228ENST00000495010 S100A14Q9HCY8 104 aa10.73□□□□□ -0.69
VARS-228ENST00000495010 ZNF230Q9UIE0 474 aaPredicted RBP10.73□□□□□ -0.69
VARS-228ENST00000495010 HSF4Q9ULV5 492 aa10.73□□□□□ -0.69
VARS-228ENST00000495010 LOC102724200A0A096LPH7 203 aaPredicted RBP10.72□□□□□ -0.69
VARS-228ENST00000495010 C2orf70A6NJV1 201 aa10.72□□□□□ -0.69
VARS-228ENST00000495010 BET1O15155 118 aa10.72□□□□□ -0.69
VARS-228ENST00000495010 CREBL2O60519 120 aaPredicted RBP10.72□□□□□ -0.69
VARS-228ENST00000495010 RBMXL2O75526 392 aaKnown RBP10.72□□□□□ -0.69
VARS-228ENST00000495010 TPBGQ13641 420 aa10.72□□□□□ -0.69
VARS-228ENST00000495010 INSL4Q14641 139 aa10.72□□□□□ -0.69
VARS-228ENST00000495010 PRSS8Q16651 343 aa10.72□□□□□ -0.69
VARS-228ENST00000495010 HSD17B12Q53GQ0 312 aa10.72□□□□□ -0.69
VARS-228ENST00000495010 OR52B4Q8NGK2 314 aa10.72□□□□□ -0.69
VARS-228ENST00000495010 OR6M1Q8NGM8 313 aa10.72□□□□□ -0.69
VARS-228ENST00000495010 OR4A4PQ8NGN8 299 aa10.72□□□□□ -0.69
VARS-228ENST00000495010 PLGRKTQ9HBL7 147 aa10.72□□□□□ -0.69
VARS-228ENST00000495010 ZC4H2Q9NQZ6 224 aa10.72□□□□□ -0.69
VARS-228ENST00000495010 SDHAF2Q9NX18 166 aa10.72□□□□□ -0.69
VARS-228ENST00000495010 IGKV1-6A0A0C4DH72 117 aa10.71□□□□□ -0.69
VARS-228ENST00000495010 SRRM4A7MD48 611 aaKnown RBP10.71□□□□□ -0.69
VARS-228ENST00000495010 PPP5D1E7EU14 171 aa10.71□□□□□ -0.69
VARS-228ENST00000495010 GGCTO75223 188 aaKnown RBP10.71□□□□□ -0.69
VARS-228ENST00000495010 MAP2K4P45985 399 aa10.71□□□□□ -0.69
VARS-228ENST00000495010 UBE2KP61086 200 aa10.71□□□□□ -0.69
VARS-228ENST00000495010 QRFPP83859 136 aa10.71□□□□□ -0.69
VARS-228ENST00000495010 P2RY14Q15391 338 aa10.71□□□□□ -0.69
VARS-228ENST00000495010 ANKRD55Q3KP44 614 aa10.71□□□□□ -0.69
VARS-228ENST00000495010 IDO2Q6ZQW0 420 aa10.71□□□□□ -0.69
VARS-228ENST00000495010 SLC25A42Q86VD7 318 aa10.71□□□□□ -0.69
VARS-228ENST00000495010 NECAP1Q8NC96 275 aa10.71□□□□□ -0.69
VARS-228ENST00000495010 OR10J5Q8NHC4 309 aa10.71□□□□□ -0.69
VARS-228ENST00000495010 ARHGAP5-AS1Q96IT6 56 aa10.71□□□□□ -0.69
VARS-228ENST00000495010 SPIN2AQ99865 258 aa10.71□□□□□ -0.69
VARS-228ENST00000495010 SPIN2BQ9BPZ2 258 aa10.71□□□□□ -0.69
VARS-228ENST00000495010 OVOL2Q9BRP0 275 aa10.71□□□□□ -0.69
VARS-228ENST00000495010 KLK5Q9Y337 293 aaPredicted RBP10.71□□□□□ -0.69
VARS-228ENST00000495010 TRBV9A0A0B4J1U6 114 aa10.7□□□□□ -0.7
VARS-228ENST00000495010 FABP7O15540 132 aa10.7□□□□□ -0.7
VARS-228ENST00000495010 OR2J3O76001 311 aa10.7□□□□□ -0.7
VARS-228ENST00000495010 NDUFB8O95169 186 aa10.7□□□□□ -0.7
VARS-228ENST00000495010 OR2C1O95371 312 aa10.7□□□□□ -0.7
VARS-228ENST00000495010 CRYZL1O95825 349 aa10.7□□□□□ -0.7
VARS-228ENST00000495010 ZNF45Q02386 682 aa10.7□□□□□ -0.7
VARS-228ENST00000495010 C15orf32Q32M92 178 aa10.7□□□□□ -0.7
VARS-228ENST00000495010 ZNF57Q68EA5 555 aaPredicted RBP10.7□□□□□ -0.7
VARS-228ENST00000495010 AHSA2Q719I0 299 aa10.7□□□□□ -0.7
VARS-228ENST00000495010 CEACAM19Q7Z692 300 aa10.7□□□□□ -0.7
VARS-228ENST00000495010 FAM89BQ8N5H3 189 aa10.7□□□□□ -0.7
VARS-228ENST00000495010 NANOGP1Q8N7R0 232 aa10.7□□□□□ -0.7
VARS-228ENST00000495010 ADTRPQ96IZ2 230 aa10.7□□□□□ -0.7
VARS-228ENST00000495010 PECRQ9BY49 303 aa10.7□□□□□ -0.7
VARS-228ENST00000495010 A0A0J9YWU9 116 aa10.69□□□□□ -0.7
VARS-228ENST00000495010 ZNF320A2RRD8 509 aa10.69□□□□□ -0.7
VARS-228ENST00000495010 LGALS9O00182 355 aa10.69□□□□□ -0.7
VARS-228ENST00000495010 HLA-AP01891 365 aaKnown RBP10.69□□□□□ -0.7
VARS-228ENST00000495010 CD3GP09693 182 aa10.69□□□□□ -0.7
VARS-228ENST00000495010 EDN2P20800 178 aa10.69□□□□□ -0.7
VARS-228ENST00000495010 CBLN1P23435 193 aa10.69□□□□□ -0.7
VARS-228ENST00000495010 MRGPRG-AS1Q2M3A8 158 aa10.69□□□□□ -0.7
VARS-228ENST00000495010 FAM106AQ4KMX7 169 aa10.69□□□□□ -0.7
VARS-228ENST00000495010 CEMP1Q6PRD7 247 aaPredicted RBP10.69□□□□□ -0.7
VARS-228ENST00000495010 TTC9CQ8N5M4 171 aa10.69□□□□□ -0.7
VARS-228ENST00000495010 OR56B1Q8NGI3 324 aa10.69□□□□□ -0.7
VARS-228ENST00000495010 OSR1Q8TAX0 266 aaPredicted RBP10.69□□□□□ -0.7
VARS-228ENST00000495010 GINS4Q9BRT9 223 aa10.69□□□□□ -0.7
VARS-228ENST00000495010 DCUN1D5Q9BTE7 237 aa10.69□□□□□ -0.7
VARS-228ENST00000495010 SELENOKQ9Y6D0 94 aa10.69□□□□□ -0.7
VARS-228ENST00000495010 ALMS1Q8TCU4 4167 aa10.69□□□□□ -0.7
VARS-228ENST00000495010 DPPA5A6NC42 116 aa10.68□□□□□ -0.7
VARS-228ENST00000495010 ARL3P36405 182 aa10.68□□□□□ -0.7
VARS-228ENST00000495010 TMEM50BP56557 158 aa10.68□□□□□ -0.7
VARS-228ENST00000495010 PLECQ15149 4684 aaKnown RBP10.68□□□□□ -0.7
VARS-228ENST00000495010 RAB11BQ15907 218 aa10.68□□□□□ -0.7
VARS-228ENST00000495010 IGSF11Q5DX21 431 aa10.68□□□□□ -0.7
VARS-228ENST00000495010 GPHB5Q86YW7 130 aa10.68□□□□□ -0.7
VARS-228ENST00000495010 MMD2Q8IY49 270 aa10.68□□□□□ -0.7
VARS-228ENST00000495010 TMEM61Q8N0U2 210 aa10.68□□□□□ -0.7
VARS-228ENST00000495010 DHRSXQ8N5I4 330 aa10.68□□□□□ -0.7
VARS-228ENST00000495010 CACNG8Q8WXS5 425 aa10.68□□□□□ -0.7
VARS-228ENST00000495010 ZNF430Q9H8G1 570 aaPredicted RBP10.68□□□□□ -0.7
VARS-228ENST00000495010 PSORS1C1Q9UIG5 152 aa10.68□□□□□ -0.7
VARS-228ENST00000495010 FBXL7Q9UJT9 491 aa10.68□□□□□ -0.7
VARS-228ENST00000495010 FOXI3A8MTJ6 420 aaPredicted RBP10.67□□□□□ -0.7
VARS-228ENST00000495010 SCAF4O95104 1147 aaKnown RBP10.67□□□□□ -0.7
VARS-228ENST00000495010 GSTT2P0CG29 244 aa10.67□□□□□ -0.7
VARS-228ENST00000495010 GSTT2BP0CG30 244 aa10.67□□□□□ -0.7
VARS-228ENST00000495010 RANBP1P43487 201 aa10.67□□□□□ -0.7
VARS-228ENST00000495010 APOC4P55056 127 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms