RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 APOL4Q9BPW4 351 aa2.21□□□□□ -2.06
SMC4-224ENST00000494612 ZNF649Q9BS31 505 aa2.21□□□□□ -2.06
SMC4-224ENST00000494612 TRPM6Q9BX84 2022 aa2.21□□□□□ -2.06
SMC4-224ENST00000494612 PLA2G12AQ9BZM1 189 aa2.21□□□□□ -2.06
SMC4-224ENST00000494612 ULBP3Q9BZM4 244 aa2.21□□□□□ -2.06
SMC4-224ENST00000494612 NXF2Q9GZY0 626 aaKnown RBP2.21□□□□□ -2.06
SMC4-224ENST00000494612 SDHAF3Q9NRP4 125 aa2.21□□□□□ -2.06
SMC4-224ENST00000494612 CISHQ9NSE2 258 aa2.21□□□□□ -2.06
SMC4-224ENST00000494612 ZNF492Q9P255 531 aa2.21□□□□□ -2.06
SMC4-224ENST00000494612 ZNF391Q9UJN7 358 aa2.21□□□□□ -2.06
SMC4-224ENST00000494612 FBXL3Q9UKT7 428 aa2.21□□□□□ -2.06
SMC4-224ENST00000494612 HS3ST2Q9Y278 367 aa2.21□□□□□ -2.06
SMC4-224ENST00000494612 INSIG2Q9Y5U4 225 aa2.21□□□□□ -2.06
SMC4-224ENST00000494612 C2CD3Q4AC94 2353 aa2.21□□□□□ -2.06
SMC4-224ENST00000494612 MED13Q9UHV7 2174 aa2.2□□□□□ -2.06
SMC4-224ENST00000494612 ITPR2Q14571 2701 aa2.2□□□□□ -2.06
SMC4-224ENST00000494612 LRRK2Q5S007 2527 aa2.2□□□□□ -2.06
SMC4-224ENST00000494612 A0A0A6YYH2 397 aa2.2□□□□□ -2.06
SMC4-224ENST00000494612 KIR2DS1A0A191URI9 304 aa2.2□□□□□ -2.06
SMC4-224ENST00000494612 TMEM213A2RRL7 107 aa2.2□□□□□ -2.06
SMC4-224ENST00000494612 RBFOX3A6NFN3 312 aa2.2□□□□□ -2.06
SMC4-224ENST00000494612 A6NJ64 397 aa2.2□□□□□ -2.06
SMC4-224ENST00000494612 ARGFXA6NJG6 315 aa2.2□□□□□ -2.06
SMC4-224ENST00000494612 KLRC4-KLRK1H3BQV0 150 aa2.2□□□□□ -2.06
SMC4-224ENST00000494612 MPZL2O60487 215 aa2.2□□□□□ -2.06
SMC4-224ENST00000494612 F8A1P23610 371 aa2.2□□□□□ -2.06
SMC4-224ENST00000494612 GTF2H1P32780 548 aa2.2□□□□□ -2.06
SMC4-224ENST00000494612 CDC34P49427 236 aaPredicted RBP2.2□□□□□ -2.06
SMC4-224ENST00000494612 EXOC3L4Q17RC7 722 aa2.2□□□□□ -2.06
SMC4-224ENST00000494612 TMEM241Q24JQ0 296 aa2.2□□□□□ -2.06
SMC4-224ENST00000494612 TMEM249Q2WGJ8 235 aa2.2□□□□□ -2.06
SMC4-224ENST00000494612 FAM151BQ6UXP7 276 aa2.2□□□□□ -2.06
SMC4-224ENST00000494612 SPNS3Q6ZMD2 512 aa2.2□□□□□ -2.06
SMC4-224ENST00000494612 FA2HQ7L5A8 372 aa2.2□□□□□ -2.06
SMC4-224ENST00000494612 OR2K2Q8NGT1 345 aa2.2□□□□□ -2.06
SMC4-224ENST00000494612 OR5AK3PQ8NH89 298 aa2.2□□□□□ -2.06
SMC4-224ENST00000494612 CCL4L1Q8NHW4 92 aa2.2□□□□□ -2.06
SMC4-224ENST00000494612 BLNKQ8WV28 456 aa2.2□□□□□ -2.06
SMC4-224ENST00000494612 MRAP2Q96G30 205 aa2.2□□□□□ -2.06
SMC4-224ENST00000494612 PPP1R36Q96LQ0 422 aa2.2□□□□□ -2.06
SMC4-224ENST00000494612 RILPQ96NA2 401 aa2.2□□□□□ -2.06
SMC4-224ENST00000494612 METTL8Q9H825 291 aaKnown RBP2.2□□□□□ -2.06
SMC4-224ENST00000494612 PARP11Q9NR21 331 aa2.2□□□□□ -2.06
SMC4-224ENST00000494612 TAS2R13Q9NYV9 303 aa2.2□□□□□ -2.06
SMC4-224ENST00000494612 OR51B4Q9Y5P0 310 aa2.2□□□□□ -2.06
SMC4-224ENST00000494612 ANKRD36A6QL64 1941 aa2.2□□□□□ -2.06
SMC4-224ENST00000494612 ABCA12Q86UK0 2595 aa2.2□□□□□ -2.06
SMC4-224ENST00000494612 SHANK1Q9Y566 2161 aa2.2□□□□□ -2.06
SMC4-224ENST00000494612 A0A0D9SEW6 157 aa2.19□□□□□ -2.06
SMC4-224ENST00000494612 LOC389332A0A1B0GUA5 103 aa2.19□□□□□ -2.06
SMC4-224ENST00000494612 A0A1W2PRG6 482 aa2.19□□□□□ -2.06
SMC4-224ENST00000494612 LIN7AO14910 233 aaPredicted RBP2.19□□□□□ -2.06
SMC4-224ENST00000494612 TOX3O15405 576 aaPredicted RBP2.19□□□□□ -2.06
SMC4-224ENST00000494612 CRXO43186 299 aaPredicted RBP2.19□□□□□ -2.06
SMC4-224ENST00000494612 STX10O60499 249 aa2.19□□□□□ -2.06
SMC4-224ENST00000494612 ENTPD6O75354 484 aa2.19□□□□□ -2.06
SMC4-224ENST00000494612 CRTAPO75718 401 aaPredicted RBP2.19□□□□□ -2.06
SMC4-224ENST00000494612 KCNK2O95069 426 aa2.19□□□□□ -2.06
SMC4-224ENST00000494612 ATP6V1G2O95670 118 aa2.19□□□□□ -2.06
SMC4-224ENST00000494612 RAB36O95755 333 aa2.19□□□□□ -2.06
SMC4-224ENST00000494612 LIMS3P0CW19 117 aa2.19□□□□□ -2.06
SMC4-224ENST00000494612 LIMS4P0CW20 117 aa2.19□□□□□ -2.06
SMC4-224ENST00000494612 CD99P14209 185 aa2.19□□□□□ -2.06
SMC4-224ENST00000494612 CD34P28906 385 aa2.19□□□□□ -2.06
SMC4-224ENST00000494612 SLC6A1P30531 599 aa2.19□□□□□ -2.06
SMC4-224ENST00000494612 PSMD7P51665 324 aa2.19□□□□□ -2.06
SMC4-224ENST00000494612 SLC18A1P54219 525 aa2.19□□□□□ -2.06
SMC4-224ENST00000494612 KLF3P57682 345 aaPredicted RBP2.19□□□□□ -2.06
SMC4-224ENST00000494612 RAB25P57735 213 aa2.19□□□□□ -2.06
SMC4-224ENST00000494612 RAB8AP61006 207 aa2.19□□□□□ -2.06
SMC4-224ENST00000494612 MEF2CQ06413 473 aaPredicted RBP2.19□□□□□ -2.06
SMC4-224ENST00000494612 ZNF235Q14590 738 aa2.19□□□□□ -2.06
SMC4-224ENST00000494612 ESPL1Q14674 2120 aa2.19□□□□□ -2.06
SMC4-224ENST00000494612 SSX1Q16384 188 aa2.19□□□□□ -2.06
SMC4-224ENST00000494612 DEFB134Q4QY38 66 aa2.19□□□□□ -2.06
SMC4-224ENST00000494612 LDLRAD2Q5SZI1 272 aa2.19□□□□□ -2.06
SMC4-224ENST00000494612 SYPL2Q5VXT5 272 aa2.19□□□□□ -2.06
SMC4-224ENST00000494612 PTRHD1Q6GMV3 140 aaKnown RBP2.19□□□□□ -2.06
SMC4-224ENST00000494612 TMEM144Q7Z5S9 345 aa2.19□□□□□ -2.06
SMC4-224ENST00000494612 LINC00596Q86U02 117 aa2.19□□□□□ -2.06
SMC4-224ENST00000494612 ZFP62Q8NB50 900 aaPredicted RBP2.19□□□□□ -2.06
SMC4-224ENST00000494612 ST6GALNAC3Q8NDV1 305 aa2.19□□□□□ -2.06
SMC4-224ENST00000494612 LFNGQ8NES3 379 aa2.19□□□□□ -2.06
SMC4-224ENST00000494612 OR4C13Q8NGP0 309 aa2.19□□□□□ -2.06
SMC4-224ENST00000494612 ACTL9Q8TC94 416 aa2.19□□□□□ -2.06
SMC4-224ENST00000494612 DYNC2LI1Q8TCX1 351 aa2.19□□□□□ -2.06
SMC4-224ENST00000494612 CT55Q8WUE5 264 aa2.19□□□□□ -2.06
SMC4-224ENST00000494612 PATE1Q8WXA2 126 aa2.19□□□□□ -2.06
SMC4-224ENST00000494612 PPWD1Q96BP3 646 aaKnown RBP2.19□□□□□ -2.06
SMC4-224ENST00000494612 PGLYRP3Q96LB9 341 aa2.19□□□□□ -2.06
SMC4-224ENST00000494612 TMEM56Q96MV1 263 aa2.19□□□□□ -2.06
SMC4-224ENST00000494612 PEBP4Q96S96 227 aa2.19□□□□□ -2.06
SMC4-224ENST00000494612 TAPBPLQ9BX59 468 aa2.19□□□□□ -2.06
SMC4-224ENST00000494612 WDR54Q9H977 334 aa2.19□□□□□ -2.06
SMC4-224ENST00000494612 FAM60AQ9NP50 221 aa2.19□□□□□ -2.06
SMC4-224ENST00000494612 DIABLOQ9NR28 239 aa2.19□□□□□ -2.06
SMC4-224ENST00000494612 INIPQ9NRY2 104 aa2.19□□□□□ -2.06
SMC4-224ENST00000494612 ASF1BQ9NVP2 202 aa2.19□□□□□ -2.06
SMC4-224ENST00000494612 DMAC2Q9NW81 257 aa2.19□□□□□ -2.06
SMC4-224ENST00000494612 ZNF780BQ9Y6R6 833 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms