RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 FAM90A20PA6NIJ5 464 aa6.77□□□□□ -1.33
BRCA1-221ENST00000493795 FAM90A8PA6NJQ4 464 aa6.77□□□□□ -1.33
BRCA1-221ENST00000493795 FAM90A7PA6NKC0 464 aa6.77□□□□□ -1.33
BRCA1-221ENST00000493795 FAM90A22PA8MWA6 464 aa6.77□□□□□ -1.33
BRCA1-221ENST00000493795 FAM90A12PA8MX19 464 aa6.77□□□□□ -1.33
BRCA1-221ENST00000493795 FAM90A5PA8MXJ8 464 aa6.77□□□□□ -1.33
BRCA1-221ENST00000493795 FAM90A23PA8MXZ1 464 aa6.77□□□□□ -1.33
BRCA1-221ENST00000493795 LINC01565O15544 149 aa6.77□□□□□ -1.33
BRCA1-221ENST00000493795 FAM90A15PP0C7V4 464 aa6.77□□□□□ -1.33
BRCA1-221ENST00000493795 FAM90A13PP0C7W8 464 aa6.77□□□□□ -1.33
BRCA1-221ENST00000493795 FAM90A14PP0C7W9 464 aa6.77□□□□□ -1.33
BRCA1-221ENST00000493795 FAM90A24PP0C7X0 464 aa6.77□□□□□ -1.33
BRCA1-221ENST00000493795 UNC119Q13432 240 aa6.77□□□□□ -1.33
BRCA1-221ENST00000493795 ZNF146Q15072 292 aa6.77□□□□□ -1.33
BRCA1-221ENST00000493795 WDR82Q6UXN9 313 aa6.77□□□□□ -1.33
BRCA1-221ENST00000493795 MSRB3Q8IXL7 192 aa6.77□□□□□ -1.33
BRCA1-221ENST00000493795 OR4X2Q8NGF9 303 aa6.77□□□□□ -1.33
BRCA1-221ENST00000493795 PLA2G10O15496 165 aa6.77□□□□□ -1.33
BRCA1-221ENST00000493795 VENTXO95231 258 aa6.77□□□□□ -1.33
BRCA1-221ENST00000493795 NAPSAO96009 420 aa6.77□□□□□ -1.33
BRCA1-221ENST00000493795 LIFP15018 202 aa6.77□□□□□ -1.33
BRCA1-221ENST00000493795 TSPAN7P41732 249 aa6.77□□□□□ -1.33
BRCA1-221ENST00000493795 UCP2P55851 309 aa6.77□□□□□ -1.33
BRCA1-221ENST00000493795 TNFRSF9Q07011 255 aa6.77□□□□□ -1.33
BRCA1-221ENST00000493795 PRSS53Q2L4Q9 553 aa6.77□□□□□ -1.33
BRCA1-221ENST00000493795 ST6GALNAC6Q969X2 333 aa6.77□□□□□ -1.33
BRCA1-221ENST00000493795 NABP2Q9BQ15 211 aa6.77□□□□□ -1.33
BRCA1-221ENST00000493795 A8MWV9 139 aa6.76□□□□□ -1.33
BRCA1-221ENST00000493795 PRR32B1ATL7 298 aa6.76□□□□□ -1.33
BRCA1-221ENST00000493795 CBLN1P23435 193 aa6.76□□□□□ -1.33
BRCA1-221ENST00000493795 HIST1H4AP62805 103 aaKnown RBP6.76□□□□□ -1.33
BRCA1-221ENST00000493795 ZIC1Q15915 447 aa6.76□□□□□ -1.33
BRCA1-221ENST00000493795 FGFRL1Q8N441 504 aa6.76□□□□□ -1.33
BRCA1-221ENST00000493795 ITLN2Q8WWU7 325 aaPredicted RBP6.76□□□□□ -1.33
BRCA1-221ENST00000493795 MGST2Q99735 147 aa6.76□□□□□ -1.33
BRCA1-221ENST00000493795 VGLL1Q99990 258 aa6.76□□□□□ -1.33
BRCA1-221ENST00000493795 ZNF257Q9Y2Q1 563 aa6.76□□□□□ -1.33
BRCA1-221ENST00000493795 KIDINS220Q9ULH0 1771 aa6.76□□□□□ -1.33
BRCA1-221ENST00000493795 TRGV2A0A075B6R0 118 aa6.76□□□□□ -1.33
BRCA1-221ENST00000493795 A0A0U1RQV5 110 aa6.76□□□□□ -1.33
BRCA1-221ENST00000493795 C1QL1O75973 258 aa6.76□□□□□ -1.33
BRCA1-221ENST00000493795 REG1AP05451 166 aa6.76□□□□□ -1.33
BRCA1-221ENST00000493795 LGALS1P09382 135 aaKnown RBP6.76□□□□□ -1.33
BRCA1-221ENST00000493795 ATP5IP56385 69 aaPredicted RBP6.76□□□□□ -1.33
BRCA1-221ENST00000493795 LINC00305Q7Z4B0 112 aa6.76□□□□□ -1.33
BRCA1-221ENST00000493795 TMEM86BQ8N661 226 aa6.76□□□□□ -1.33
BRCA1-221ENST00000493795 LRTM2Q8N967 370 aa6.76□□□□□ -1.33
BRCA1-221ENST00000493795 ZNF784Q8NCA9 323 aaPredicted RBP6.76□□□□□ -1.33
BRCA1-221ENST00000493795 OR11H4Q8NGC9 324 aa6.76□□□□□ -1.33
BRCA1-221ENST00000493795 FMC1Q96HJ9 113 aa6.76□□□□□ -1.33
BRCA1-221ENST00000493795 MYH2Q9UKX2 1941 aa6.76□□□□□ -1.33
BRCA1-221ENST00000493795 PPIAL4CA0A0B4J2A2 164 aa6.76□□□□□ -1.33
BRCA1-221ENST00000493795 NMBP08949 121 aa6.76□□□□□ -1.33
BRCA1-221ENST00000493795 PPIAL4GP0DN37 164 aa6.76□□□□□ -1.33
BRCA1-221ENST00000493795 HTN3P15516 51 aa6.76□□□□□ -1.33
BRCA1-221ENST00000493795 CTGFP29279 349 aa6.76□□□□□ -1.33
BRCA1-221ENST00000493795 FOXA3P55318 350 aaPredicted RBP6.76□□□□□ -1.33
BRCA1-221ENST00000493795 DCAF12L2Q5VW00 463 aa6.76□□□□□ -1.33
BRCA1-221ENST00000493795 Q6AWC8 147 aa6.76□□□□□ -1.33
BRCA1-221ENST00000493795 ZFAND6Q6FIF0 208 aa6.76□□□□□ -1.33
BRCA1-221ENST00000493795 ASCL4Q6XD76 172 aa6.76□□□□□ -1.33
BRCA1-221ENST00000493795 LINC01555Q8NAE3 123 aa6.76□□□□□ -1.33
BRCA1-221ENST00000493795 TMEM186Q96B77 213 aa6.76□□□□□ -1.33
BRCA1-221ENST00000493795 UCN2Q96RP3 112 aa6.76□□□□□ -1.33
BRCA1-221ENST00000493795 LINC01587Q99440 93 aa6.76□□□□□ -1.33
BRCA1-221ENST00000493795 OPN3Q9H1Y3 402 aaPredicted RBP6.76□□□□□ -1.33
BRCA1-221ENST00000493795 IL36BQ9NZH7 164 aa6.76□□□□□ -1.33
BRCA1-221ENST00000493795 SERGEFQ9UGK8 458 aa6.76□□□□□ -1.33
BRCA1-221ENST00000493795 MRPS18BQ9Y676 258 aaKnown RBP6.76□□□□□ -1.33
BRCA1-221ENST00000493795 IFI27P40305 119 aaPredicted RBP6.76□□□□□ -1.33
BRCA1-221ENST00000493795 UCNP55089 124 aa6.76□□□□□ -1.33
BRCA1-221ENST00000493795 OR10J3Q5JRS4 329 aa6.76□□□□□ -1.33
BRCA1-221ENST00000493795 S100A7L2Q5SY68 101 aa6.76□□□□□ -1.33
BRCA1-221ENST00000493795 C1QL3Q5VWW1 255 aa6.76□□□□□ -1.33
BRCA1-221ENST00000493795 FAM89BQ8N5H3 189 aa6.76□□□□□ -1.33
BRCA1-221ENST00000493795 SMIM8Q96KF7 97 aa6.76□□□□□ -1.33
BRCA1-221ENST00000493795 ZG16O60844 167 aa6.75□□□□□ -1.33
BRCA1-221ENST00000493795 TOMM40O96008 361 aa6.75□□□□□ -1.33
BRCA1-221ENST00000493795 SCTP09683 121 aa6.75□□□□□ -1.33
BRCA1-221ENST00000493795 CCL3P10147 92 aa6.75□□□□□ -1.33
BRCA1-221ENST00000493795 LEPP41159 167 aa6.75□□□□□ -1.33
BRCA1-221ENST00000493795 WDYHV1Q96HA8 205 aa6.75□□□□□ -1.33
BRCA1-221ENST00000493795 JPT1Q9UK76 154 aa6.75□□□□□ -1.33
BRCA1-221ENST00000493795 VWC2LB2RUY7 222 aa6.75□□□□□ -1.33
BRCA1-221ENST00000493795 F8WEM9 126 aa6.75□□□□□ -1.33
BRCA1-221ENST00000493795 FSTP19883 344 aa6.75□□□□□ -1.33
BRCA1-221ENST00000493795 P2RY4P51582 365 aa6.75□□□□□ -1.33
BRCA1-221ENST00000493795 ZNF660Q6AZW8 331 aaPredicted RBP6.75□□□□□ -1.33
BRCA1-221ENST00000493795 CYP2G1PQ6ZSU1 146 aa6.75□□□□□ -1.33
BRCA1-221ENST00000493795 C1orf210Q8IVY1 113 aa6.75□□□□□ -1.33
BRCA1-221ENST00000493795 ABHD12Q8N2K0 398 aa6.75□□□□□ -1.33
BRCA1-221ENST00000493795 ITLN1Q8WWA0 313 aa6.75□□□□□ -1.33
BRCA1-221ENST00000493795 NPCDR1Q9BY65 106 aa6.75□□□□□ -1.33
BRCA1-221ENST00000493795 CST9LQ9H4G1 147 aa6.75□□□□□ -1.33
BRCA1-221ENST00000493795 TMEM30AQ9NV96 361 aa6.75□□□□□ -1.33
BRCA1-221ENST00000493795 LOC105371242A0A075B767 164 aa6.75□□□□□ -1.33
BRCA1-221ENST00000493795 DXOO77932 396 aaKnown RBP6.75□□□□□ -1.33
BRCA1-221ENST00000493795 ICAM4Q14773 271 aa6.75□□□□□ -1.33
BRCA1-221ENST00000493795 KIAA0040Q15053 153 aa6.75□□□□□ -1.33
BRCA1-221ENST00000493795 TBR1Q16650 682 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms