RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 PDZD9Q8IXQ8 264 aa8.14□□□□□ -1.11
USP11-211ENST00000489111 DCUN1D4Q92564 292 aa8.14□□□□□ -1.11
USP11-211ENST00000489111 ST6GALNAC6Q969X2 333 aa8.14□□□□□ -1.11
USP11-211ENST00000489111 GPR146Q96CH1 333 aa8.14□□□□□ -1.11
USP11-211ENST00000489111 NABP2Q9BQ15 211 aa8.14□□□□□ -1.11
USP11-211ENST00000489111 AIFM2Q9BRQ8 373 aa8.14□□□□□ -1.11
USP11-211ENST00000489111 DPM3Q9P2X0 92 aa8.14□□□□□ -1.11
USP11-211ENST00000489111 MBD2Q9UBB5 411 aa8.14□□□□□ -1.11
USP11-211ENST00000489111 CACNG5Q9UF02 275 aa8.14□□□□□ -1.11
USP11-211ENST00000489111 WASHC3Q9Y3C0 194 aa8.14□□□□□ -1.11
USP11-211ENST00000489111 LSM5Q9Y4Y9 91 aaKnown RBP8.14□□□□□ -1.11
USP11-211ENST00000489111 FBN2P35556 2912 aa8.14□□□□□ -1.11
USP11-211ENST00000489111 A0A0G2JRQ6 117 aa8.13□□□□□ -1.11
USP11-211ENST00000489111 A0A1W2PRD5 423 aa8.13□□□□□ -1.11
USP11-211ENST00000489111 A0A1W2PRF3 423 aa8.13□□□□□ -1.11
USP11-211ENST00000489111 A0A1W2PRM7 423 aa8.13□□□□□ -1.11
USP11-211ENST00000489111 RNF223E7ERA6 249 aa8.13□□□□□ -1.11
USP11-211ENST00000489111 RNASEK-C17orf49H0YIS7 233 aa8.13□□□□□ -1.11
USP11-211ENST00000489111 H0YJW9 148 aa8.13□□□□□ -1.11
USP11-211ENST00000489111 ARPC5O15511 151 aa8.13□□□□□ -1.11
USP11-211ENST00000489111 ST8SIA3O43173 380 aa8.13□□□□□ -1.11
USP11-211ENST00000489111 RBMXL2O75526 392 aaKnown RBP8.13□□□□□ -1.11
USP11-211ENST00000489111 SNAPC5O75971 98 aa8.13□□□□□ -1.11
USP11-211ENST00000489111 MBPP02686 304 aaPredicted RBP8.13□□□□□ -1.11
USP11-211ENST00000489111 SLC25A4P12235 298 aa8.13□□□□□ -1.11
USP11-211ENST00000489111 MMP9P14780 707 aa8.13□□□□□ -1.11
USP11-211ENST00000489111 C4BPBP20851 252 aa8.13□□□□□ -1.11
USP11-211ENST00000489111 MC5RP33032 325 aa8.13□□□□□ -1.11
USP11-211ENST00000489111 LOXL1Q08397 574 aaPredicted RBP8.13□□□□□ -1.11
USP11-211ENST00000489111 PRSS54Q6PEW0 395 aa8.13□□□□□ -1.11
USP11-211ENST00000489111 SSX9Q7RTT3 188 aa8.13□□□□□ -1.11
USP11-211ENST00000489111 MOB3BQ86TA1 216 aa8.13□□□□□ -1.11
USP11-211ENST00000489111 ZNF546Q86UE3 836 aa8.13□□□□□ -1.11
USP11-211ENST00000489111 PDPNQ86YL7 162 aa8.13□□□□□ -1.11
USP11-211ENST00000489111 LINC01356Q8N9X3 169 aa8.13□□□□□ -1.11
USP11-211ENST00000489111 INO80EQ8NBZ0 244 aaPredicted RBP8.13□□□□□ -1.11
USP11-211ENST00000489111 OR11H4Q8NGC9 324 aa8.13□□□□□ -1.11
USP11-211ENST00000489111 OR5AN1Q8NGI8 311 aa8.13□□□□□ -1.11
USP11-211ENST00000489111 OR4D5Q8NGN0 318 aa8.13□□□□□ -1.11
USP11-211ENST00000489111 LHX4Q969G2 390 aa8.13□□□□□ -1.11
USP11-211ENST00000489111 HARBI1Q96MB7 349 aa8.13□□□□□ -1.11
USP11-211ENST00000489111 Q96MF0 132 aa8.13□□□□□ -1.11
USP11-211ENST00000489111 TBX15Q96SF7 602 aa8.13□□□□□ -1.11
USP11-211ENST00000489111 REG4Q9BYZ8 158 aa8.13□□□□□ -1.11
USP11-211ENST00000489111 HSPB11Q9Y547 144 aa8.13□□□□□ -1.11
USP11-211ENST00000489111 POMT1Q9Y6A1 747 aa8.13□□□□□ -1.11
USP11-211ENST00000489111 NAV2Q8IVL1 2488 aa8.13□□□□□ -1.11
USP11-211ENST00000489111 AKAP6Q13023 2319 aa8.12□□□□□ -1.11
USP11-211ENST00000489111 IGHV1-3A0A0C4DH29 117 aa8.12□□□□□ -1.11
USP11-211ENST00000489111 HMSDA8MTL9 139 aa8.12□□□□□ -1.11
USP11-211ENST00000489111 L7N2F9 121 aa8.12□□□□□ -1.11
USP11-211ENST00000489111 SHOXO15266 292 aa8.12□□□□□ -1.11
USP11-211ENST00000489111 SSSCA1O60232 199 aa8.12□□□□□ -1.11
USP11-211ENST00000489111 PVALBP20472 110 aaPredicted RBP8.12□□□□□ -1.11
USP11-211ENST00000489111 GATA3P23771 443 aa8.12□□□□□ -1.11
USP11-211ENST00000489111 UBE2E1P51965 193 aa8.12□□□□□ -1.11
USP11-211ENST00000489111 ARHGDIBP52566 201 aa8.12□□□□□ -1.11
USP11-211ENST00000489111 VAMP2P63027 116 aa8.12□□□□□ -1.11
USP11-211ENST00000489111 PAX8Q06710 450 aa8.12□□□□□ -1.11
USP11-211ENST00000489111 IL15RAQ13261 267 aa8.12□□□□□ -1.11
USP11-211ENST00000489111 DIAPH2-AS1Q14236 149 aa8.12□□□□□ -1.11
USP11-211ENST00000489111 IZUMO4Q1ZYL8 232 aa8.12□□□□□ -1.11
USP11-211ENST00000489111 MINOS1Q5TGZ0 78 aa8.12□□□□□ -1.11
USP11-211ENST00000489111 HCP5Q6MZN7 132 aa8.12□□□□□ -1.11
USP11-211ENST00000489111 CCDC144NLQ6NUI1 221 aa8.12□□□□□ -1.11
USP11-211ENST00000489111 OR8H3Q8N146 312 aa8.12□□□□□ -1.11
USP11-211ENST00000489111 C9orf62Q8N4C0 152 aa8.12□□□□□ -1.11
USP11-211ENST00000489111 OSR1Q8TAX0 266 aaPredicted RBP8.12□□□□□ -1.11
USP11-211ENST00000489111 FLYWCH2Q96CP2 140 aaKnown RBP8.12□□□□□ -1.11
USP11-211ENST00000489111 RHOVQ96L33 236 aa8.12□□□□□ -1.11
USP11-211ENST00000489111 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.12□□□□□ -1.11
USP11-211ENST00000489111 TMEM140Q9NV12 185 aa8.12□□□□□ -1.11
USP11-211ENST00000489111 HIF1ANQ9NWT6 349 aa8.12□□□□□ -1.11
USP11-211ENST00000489111 COA4Q9NYJ1 87 aa8.12□□□□□ -1.11
USP11-211ENST00000489111 TBL2Q9Y4P3 447 aaKnown RBP8.12□□□□□ -1.11
USP11-211ENST00000489111 AUP1Q9Y679 476 aa8.12□□□□□ -1.11
USP11-211ENST00000489111 MINOS1-NBL1R4GNA1 71 aa8.12□□□□□ -1.11
USP11-211ENST00000489111 PTPN13Q12923 2485 aa8.12□□□□□ -1.11
USP11-211ENST00000489111 CENPEQ02224 2701 aa8.12□□□□□ -1.11
USP11-211ENST00000489111 GCN1Q92616 2671 aaKnown RBP8.12□□□□□ -1.11
USP11-211ENST00000489111 MALRD1Q5VYJ5 2156 aa8.11□□□□□ -1.11
USP11-211ENST00000489111 TACC2O95359 2948 aa8.11□□□□□ -1.11
USP11-211ENST00000489111 A0A096LNT2 108 aa8.11□□□□□ -1.11
USP11-211ENST00000489111 IGHV3-72A0A0B4J1Y9 119 aa8.11□□□□□ -1.11
USP11-211ENST00000489111 FAM90A9PA6NNJ1 464 aa8.11□□□□□ -1.11
USP11-211ENST00000489111 OOSP1A8MZH6 123 aa8.11□□□□□ -1.11
USP11-211ENST00000489111 E5RGE8 158 aa8.11□□□□□ -1.11
USP11-211ENST00000489111 LY6LH3BQJ8 138 aa8.11□□□□□ -1.11
USP11-211ENST00000489111 K7EPK0 472 aa8.11□□□□□ -1.11
USP11-211ENST00000489111 DEDDO75618 318 aa8.11□□□□□ -1.11
USP11-211ENST00000489111 NXPH3O95157 252 aa8.11□□□□□ -1.11
USP11-211ENST00000489111 IGKV1-16P04430 117 aa8.11□□□□□ -1.11
USP11-211ENST00000489111 P0C879 139 aa8.11□□□□□ -1.11
USP11-211ENST00000489111 RPS16P62249 146 aaKnown RBP8.11□□□□□ -1.11
USP11-211ENST00000489111 TMEM177Q53S58 311 aa8.11□□□□□ -1.11
USP11-211ENST00000489111 CXorf66Q5JRM2 361 aaPredicted RBP8.11□□□□□ -1.11
USP11-211ENST00000489111 TMEM65Q6PI78 240 aa8.11□□□□□ -1.11
USP11-211ENST00000489111 VKORC1L1Q8N0U8 176 aa8.11□□□□□ -1.11
USP11-211ENST00000489111 FAM71E2Q8N5Q1 922 aa8.11□□□□□ -1.11
USP11-211ENST00000489111 OR4C13Q8NGP0 309 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms