RNA–Protein interactions for RNA: ENST00000486263.1

NELFCD-209, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 708 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-209ENST00000486263 OR4S2Q8NH73 311 aa11.19□□□□□ -0.62
NELFCD-209ENST00000486263 CHPT1Q8WUD6 406 aa11.19□□□□□ -0.62
NELFCD-209ENST00000486263 TMEM230Q96A57 120 aa11.19□□□□□ -0.62
NELFCD-209ENST00000486263 SSX3Q99909 188 aa11.19□□□□□ -0.62
NELFCD-209ENST00000486263 SOX21Q9Y651 276 aaPredicted RBP11.19□□□□□ -0.62
NELFCD-209ENST00000486263 OR5AC1P0C628 307 aa11.18□□□□□ -0.62
NELFCD-209ENST00000486263 FAM106CPP0CH98 169 aa11.18□□□□□ -0.62
NELFCD-209ENST00000486263 RPS16P62249 146 aaKnown RBP11.18□□□□□ -0.62
NELFCD-209ENST00000486263 PPP1R1AQ13522 171 aa11.18□□□□□ -0.62
NELFCD-209ENST00000486263 DHRS7BQ6IAN0 325 aaPredicted RBP11.18□□□□□ -0.62
NELFCD-209ENST00000486263 PDPNQ86YL7 162 aa11.18□□□□□ -0.62
NELFCD-209ENST00000486263 CASTOR1Q8WTX7 329 aa11.18□□□□□ -0.62
NELFCD-209ENST00000486263 FLYWCH2Q96CP2 140 aaKnown RBP11.18□□□□□ -0.62
NELFCD-209ENST00000486263 AJUBAQ96IF1 538 aa11.18□□□□□ -0.62
NELFCD-209ENST00000486263 COL6A5A8TX70 2615 aa11.18□□□□□ -0.62
NELFCD-209ENST00000486263 PIGBOS1A0A0B4J2F0 54 aa11.17□□□□□ -0.62
NELFCD-209ENST00000486263 MDFIC2A0A1B0GVS7 189 aa11.17□□□□□ -0.62
NELFCD-209ENST00000486263 C9orf170A2RU37 121 aa11.17□□□□□ -0.62
NELFCD-209ENST00000486263 SHOXO15266 292 aa11.17□□□□□ -0.62
NELFCD-209ENST00000486263 ATG12O94817 140 aa11.17□□□□□ -0.62
NELFCD-209ENST00000486263 SFT2D2O95562 160 aa11.17□□□□□ -0.62
NELFCD-209ENST00000486263 CRYZL1O95825 349 aa11.17□□□□□ -0.62
NELFCD-209ENST00000486263 IGKV1D-33P01593 117 aa11.17□□□□□ -0.62
NELFCD-209ENST00000486263 IGKV1-33P01594 117 aa11.17□□□□□ -0.62
NELFCD-209ENST00000486263 IL5P05113 134 aa11.17□□□□□ -0.62
NELFCD-209ENST00000486263 SNRNP70P08621 437 aaKnown RBP11.17□□□□□ -0.62
NELFCD-209ENST00000486263 FAM157CP0CG43 387 aa11.17□□□□□ -0.62
NELFCD-209ENST00000486263 VSIG10L2P0DP72 767 aa11.17□□□□□ -0.62
NELFCD-209ENST00000486263 CD24P25063 80 aa11.17□□□□□ -0.62
NELFCD-209ENST00000486263 LPAR6P43657 344 aa11.17□□□□□ -0.62
NELFCD-209ENST00000486263 SRPXP78539 464 aa11.17□□□□□ -0.62
NELFCD-209ENST00000486263 LYG2Q86SG7 212 aa11.17□□□□□ -0.62
NELFCD-209ENST00000486263 ZNF695Q8IW36 515 aa11.17□□□□□ -0.62
NELFCD-209ENST00000486263 OR4C13Q8NGP0 309 aa11.17□□□□□ -0.62
NELFCD-209ENST00000486263 OR2T10Q8NGZ9 312 aa11.17□□□□□ -0.62
NELFCD-209ENST00000486263 COQ8AQ8NI60 647 aa11.17□□□□□ -0.62
NELFCD-209ENST00000486263 CFHR4Q92496 578 aa11.17□□□□□ -0.62
NELFCD-209ENST00000486263 GALNT14Q96FL9 552 aa11.17□□□□□ -0.62
NELFCD-209ENST00000486263 TP53RKQ96S44 253 aa11.17□□□□□ -0.62
NELFCD-209ENST00000486263 AIFM2Q9BRQ8 373 aa11.17□□□□□ -0.62
NELFCD-209ENST00000486263 FAM212BQ9NTI7 297 aaPredicted RBP11.17□□□□□ -0.62
NELFCD-209ENST00000486263 VGLL3A8MV65 326 aa11.16□□□□□ -0.62
NELFCD-209ENST00000486263 RBFOX2O43251 390 aaKnown RBP eCLIP11.16□□□□□ -0.62
NELFCD-209ENST00000486263 CREBL2O60519 120 aaPredicted RBP11.16□□□□□ -0.62
NELFCD-209ENST00000486263 RAMP3O60896 148 aa11.16□□□□□ -0.62
NELFCD-209ENST00000486263 VENTXO95231 258 aa11.16□□□□□ -0.62
NELFCD-209ENST00000486263 HPRT1P00492 218 aa11.16□□□□□ -0.62
NELFCD-209ENST00000486263 MOSP00540 346 aa11.16□□□□□ -0.62
NELFCD-209ENST00000486263 RPA2P15927 270 aa11.16□□□□□ -0.62
NELFCD-209ENST00000486263 TMEM11P17152 192 aa11.16□□□□□ -0.62
NELFCD-209ENST00000486263 MECP2P51608 486 aaKnown RBP11.16□□□□□ -0.62
NELFCD-209ENST00000486263 DYNLT3P51808 116 aa11.16□□□□□ -0.62
NELFCD-209ENST00000486263 ERVK-16P61578 105 aa11.16□□□□□ -0.62
NELFCD-209ENST00000486263 DHRS2Q13268 280 aa11.16□□□□□ -0.62
NELFCD-209ENST00000486263 HNF4GQ14541 408 aa11.16□□□□□ -0.62
NELFCD-209ENST00000486263 AANATQ16613 207 aa11.16□□□□□ -0.62
NELFCD-209ENST00000486263 THNSL2Q86YJ6 484 aa11.16□□□□□ -0.62
NELFCD-209ENST00000486263 LGI3Q8N145 548 aa11.16□□□□□ -0.62
NELFCD-209ENST00000486263 SIGLECL1Q8N7X8 197 aa11.16□□□□□ -0.62
NELFCD-209ENST00000486263 UXS1Q8NBZ7 420 aa11.16□□□□□ -0.62
NELFCD-209ENST00000486263 RNASE11Q8TAA1 199 aaKnown RBP11.16□□□□□ -0.62
NELFCD-209ENST00000486263 DDB2Q92466 427 aa11.16□□□□□ -0.62
NELFCD-209ENST00000486263 HARBI1Q96MB7 349 aa11.16□□□□□ -0.62
NELFCD-209ENST00000486263 PHB2Q99623 299 aa11.16□□□□□ -0.62
NELFCD-209ENST00000486263 SEC22CQ9BRL7 303 aa11.16□□□□□ -0.62
NELFCD-209ENST00000486263 TMEM222Q9H0R3 208 aa11.16□□□□□ -0.62
NELFCD-209ENST00000486263 PITPNC1Q9UKF7 332 aa11.16□□□□□ -0.62
NELFCD-209ENST00000486263 MXRA5Q9NR99 2828 aa11.15□□□□□ -0.62
NELFCD-209ENST00000486263 H3BUX3 64 aa11.15□□□□□ -0.62
NELFCD-209ENST00000486263 DUS4LO95620 317 aaKnown RBP11.15□□□□□ -0.62
NELFCD-209ENST00000486263 HRASP01112 189 aa11.15□□□□□ -0.62
NELFCD-209ENST00000486263 UCP1P25874 307 aa11.15□□□□□ -0.62
NELFCD-209ENST00000486263 SUPT4H1P63272 117 aaKnown RBP11.15□□□□□ -0.62
NELFCD-209ENST00000486263 HABP2Q14520 560 aaPredicted RBP11.15□□□□□ -0.62
NELFCD-209ENST00000486263 TMEM187Q14656 261 aa11.15□□□□□ -0.62
NELFCD-209ENST00000486263 TATDN3Q17R31 274 aa11.15□□□□□ -0.62
NELFCD-209ENST00000486263 LIAT1Q6ZQX7 453 aa11.15□□□□□ -0.62
NELFCD-209ENST00000486263 PRIMA1Q86XR5 153 aa11.15□□□□□ -0.62
NELFCD-209ENST00000486263 OR52B4Q8NGK2 314 aa11.15□□□□□ -0.62
NELFCD-209ENST00000486263 OR5R1Q8NH85 324 aa11.15□□□□□ -0.62
NELFCD-209ENST00000486263 OSR1Q8TAX0 266 aaPredicted RBP11.15□□□□□ -0.62
NELFCD-209ENST00000486263 ZNF431Q8TF32 576 aaPredicted RBP11.15□□□□□ -0.62
NELFCD-209ENST00000486263 ZNF418Q8TF45 676 aaPredicted RBP11.15□□□□□ -0.62
NELFCD-209ENST00000486263 GLYATL2Q8WU03 294 aa11.15□□□□□ -0.62
NELFCD-209ENST00000486263 SSMEM1Q8WWF3 244 aa11.15□□□□□ -0.62
NELFCD-209ENST00000486263 TSNAXQ99598 290 aaKnown RBP11.15□□□□□ -0.62
NELFCD-209ENST00000486263 PLEKHA2Q9HB19 425 aa11.15□□□□□ -0.62
NELFCD-209ENST00000486263 KIAA1456Q9P272 454 aa11.15□□□□□ -0.62
NELFCD-209ENST00000486263 SVEP1Q4LDE5 3571 aa11.14□□□□□ -0.63
NELFCD-209ENST00000486263 FAM90A9PA6NNJ1 464 aa11.14□□□□□ -0.63
NELFCD-209ENST00000486263 S1PR2O95136 353 aa11.14□□□□□ -0.63
NELFCD-209ENST00000486263 IGKV1-16P04430 117 aa11.14□□□□□ -0.63
NELFCD-209ENST00000486263 NQO2P16083 231 aa11.14□□□□□ -0.63
NELFCD-209ENST00000486263 LGALS7P47929 136 aa11.14□□□□□ -0.63
NELFCD-209ENST00000486263 AKR1C2P52895 323 aa11.14□□□□□ -0.63
NELFCD-209ENST00000486263 PLGLAQ15195 96 aa11.14□□□□□ -0.63
NELFCD-209ENST00000486263 LY6EQ16553 131 aa11.14□□□□□ -0.63
NELFCD-209ENST00000486263 ZNF585BQ52M93 769 aa11.14□□□□□ -0.63
NELFCD-209ENST00000486263 TMEM177Q53S58 311 aa11.14□□□□□ -0.63
NELFCD-209ENST00000486263 TMEM268Q5VZI3 342 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 133.5 ms