RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 SSX9Q7RTT3 188 aa13.68□□□□□ -0.22
CTSA-207ENST00000484855 OR5C1Q8NGR4 320 aa13.68□□□□□ -0.22
CTSA-207ENST00000484855 NEIL1Q96FI4 390 aaPredicted RBP13.68□□□□□ -0.22
CTSA-207ENST00000484855 SMIM8Q96KF7 97 aa13.68□□□□□ -0.22
CTSA-207ENST00000484855 ARV1Q9H2C2 271 aa13.68□□□□□ -0.22
CTSA-207ENST00000484855 RBKSQ9H477 322 aa13.68□□□□□ -0.22
CTSA-207ENST00000484855 CHODLQ9H9P2 273 aa13.68□□□□□ -0.22
CTSA-207ENST00000484855 FGF16O43320 207 aa13.68□□□□□ -0.22
CTSA-207ENST00000484855 CRYZL1O95825 349 aa13.68□□□□□ -0.22
CTSA-207ENST00000484855 DYNLT3P51808 116 aa13.68□□□□□ -0.22
CTSA-207ENST00000484855 TMEM267Q0VDI3 215 aaPredicted RBP13.68□□□□□ -0.22
CTSA-207ENST00000484855 ZNF266Q14584 549 aa13.68□□□□□ -0.22
CTSA-207ENST00000484855 TMEM217Q8N7C4 229 aa13.68□□□□□ -0.22
CTSA-207ENST00000484855 FAM90A9PA6NNJ1 464 aa13.67□□□□□ -0.22
CTSA-207ENST00000484855 TEX46H3BTG2 121 aa13.67□□□□□ -0.22
CTSA-207ENST00000484855 OR9G9P0C7N8 305 aa13.67□□□□□ -0.22
CTSA-207ENST00000484855 IGHV1-8P0DP01 117 aa13.67□□□□□ -0.22
CTSA-207ENST00000484855 SULT1A1P50225 295 aa13.67□□□□□ -0.22
CTSA-207ENST00000484855 TAS2R30P59541 319 aa13.67□□□□□ -0.22
CTSA-207ENST00000484855 AANATQ16613 207 aa13.67□□□□□ -0.22
CTSA-207ENST00000484855 ZNF833PQ6ZTB9 187 aa13.67□□□□□ -0.22
CTSA-207ENST00000484855 BBC3Q96PG8 261 aaPredicted RBP13.67□□□□□ -0.22
CTSA-207ENST00000484855 GINS3Q9BRX5 216 aa13.67□□□□□ -0.22
CTSA-207ENST00000484855 BARX1Q9HBU1 254 aaPredicted RBP13.67□□□□□ -0.22
CTSA-207ENST00000484855 CT45A6P0DMU7 189 aa13.66□□□□□ -0.22
CTSA-207ENST00000484855 CT45A5P0DMU8 189 aa13.66□□□□□ -0.22
CTSA-207ENST00000484855 CT45A7P0DMV0 189 aa13.66□□□□□ -0.22
CTSA-207ENST00000484855 VKORC1L1Q8N0U8 176 aa13.66□□□□□ -0.22
CTSA-207ENST00000484855 C8orf31Q8N9H6 132 aa13.66□□□□□ -0.22
CTSA-207ENST00000484855 OR10X1Q8NGY0 326 aa13.66□□□□□ -0.22
CTSA-207ENST00000484855 MALRD1Q5VYJ5 2156 aa13.66□□□□□ -0.22
CTSA-207ENST00000484855 A0A1W2PPH5 198 aa13.66□□□□□ -0.22
CTSA-207ENST00000484855 J3QR06 171 aa13.66□□□□□ -0.22
CTSA-207ENST00000484855 FAM157CP0CG43 387 aa13.66□□□□□ -0.22
CTSA-207ENST00000484855 ARHGDIBP52566 201 aa13.66□□□□□ -0.22
CTSA-207ENST00000484855 WDR25Q64LD2 544 aaPredicted RBP13.66□□□□□ -0.22
CTSA-207ENST00000484855 LINC00311Q8N616 119 aa13.66□□□□□ -0.22
CTSA-207ENST00000484855 OR1S2Q8NGQ3 325 aa13.66□□□□□ -0.22
CTSA-207ENST00000484855 ZNF596Q8TC21 504 aa13.66□□□□□ -0.22
CTSA-207ENST00000484855 REG4Q9BYZ8 158 aa13.66□□□□□ -0.22
CTSA-207ENST00000484855 TMEM140Q9NV12 185 aa13.66□□□□□ -0.22
CTSA-207ENST00000484855 SESN1Q9Y6P5 492 aa13.66□□□□□ -0.22
CTSA-207ENST00000484855 A0A087X0M5 115 aa13.65□□□□□ -0.22
CTSA-207ENST00000484855 A0A1B0GX30 115 aa13.65□□□□□ -0.22
CTSA-207ENST00000484855 MFSD2BA6NFX1 497 aa13.65□□□□□ -0.22
CTSA-207ENST00000484855 OR2B8PP59922 312 aa13.65□□□□□ -0.22
CTSA-207ENST00000484855 SPANXN5Q5MJ07 72 aa13.65□□□□□ -0.22
CTSA-207ENST00000484855 TET2Q6N021 2002 aaPredicted RBP13.65□□□□□ -0.22
CTSA-207ENST00000484855 C11orf42Q8N5U0 333 aa13.65□□□□□ -0.22
CTSA-207ENST00000484855 HSD17B11Q8NBQ5 300 aa13.65□□□□□ -0.22
CTSA-207ENST00000484855 OR4A16Q8NH70 328 aa13.65□□□□□ -0.22
CTSA-207ENST00000484855 OR9G1Q8NH87 305 aa13.65□□□□□ -0.22
CTSA-207ENST00000484855 SLC35D1Q9NTN3 355 aa13.65□□□□□ -0.22
CTSA-207ENST00000484855 PPIAL4CA0A0B4J2A2 164 aa13.65□□□□□ -0.22
CTSA-207ENST00000484855 ZNF705EA8MWA4 302 aaPredicted RBP13.65□□□□□ -0.22
CTSA-207ENST00000484855 I3L521 148 aa13.65□□□□□ -0.22
CTSA-207ENST00000484855 METTL15P1P0C7V9 234 aa13.65□□□□□ -0.22
CTSA-207ENST00000484855 PPIAL4GP0DN37 164 aa13.65□□□□□ -0.22
CTSA-207ENST00000484855 RTL8BQ17RB0 113 aa13.65□□□□□ -0.22
CTSA-207ENST00000484855 C8orf46Q8TAG6 207 aa13.65□□□□□ -0.22
CTSA-207ENST00000484855 DTD1Q8TEA8 209 aa13.65□□□□□ -0.22
CTSA-207ENST00000484855 ATP5SQ99766 215 aa13.65□□□□□ -0.22
CTSA-207ENST00000484855 QTRT1Q9BXR0 403 aaKnown RBP13.65□□□□□ -0.22
CTSA-207ENST00000484855 MRPL20Q9BYC9 149 aaKnown RBP13.65□□□□□ -0.22
CTSA-207ENST00000484855 TMEM133Q9H2Q1 129 aa13.65□□□□□ -0.22
CTSA-207ENST00000484855 SEC11BP0C7V7 166 aa13.64□□□□□ -0.23
CTSA-207ENST00000484855 SULT1A2P50226 295 aa13.64□□□□□ -0.23
CTSA-207ENST00000484855 TOR2AQ5JU69 321 aa13.64□□□□□ -0.23
CTSA-207ENST00000484855 FAM71F2Q6NXP2 309 aa13.64□□□□□ -0.23
CTSA-207ENST00000484855 ABHD12Q8N2K0 398 aa13.64□□□□□ -0.23
CTSA-207ENST00000484855 ZDHHC16Q969W1 377 aa13.64□□□□□ -0.23
CTSA-207ENST00000484855 CEBPZOSA8MTT3 80 aa13.64□□□□□ -0.23
CTSA-207ENST00000484855 F12P00748 615 aaPredicted RBP13.64□□□□□ -0.23
CTSA-207ENST00000484855 SPP1P10451 314 aa13.64□□□□□ -0.23
CTSA-207ENST00000484855 GNB2P62879 340 aa13.64□□□□□ -0.23
CTSA-207ENST00000484855 DHRS7BQ6IAN0 325 aaPredicted RBP13.64□□□□□ -0.23
CTSA-207ENST00000484855 TMEM186Q96B77 213 aa13.64□□□□□ -0.23
CTSA-207ENST00000484855 CIB3Q96Q77 187 aaPredicted RBP13.64□□□□□ -0.23
CTSA-207ENST00000484855 NARFLQ9H6Q4 476 aa13.64□□□□□ -0.23
CTSA-207ENST00000484855 NDUFS7O75251 213 aa13.63□□□□□ -0.23
CTSA-207ENST00000484855 DFFBO76075 338 aa13.63□□□□□ -0.23
CTSA-207ENST00000484855 APOA2P02652 100 aa13.63□□□□□ -0.23
CTSA-207ENST00000484855 GPR6P46095 362 aaPredicted RBP13.63□□□□□ -0.23
CTSA-207ENST00000484855 AARDQ4LEZ3 155 aa13.63□□□□□ -0.23
CTSA-207ENST00000484855 SPINK9Q5DT21 86 aa13.63□□□□□ -0.23
CTSA-207ENST00000484855 RHOVQ96L33 236 aa13.63□□□□□ -0.23
CTSA-207ENST00000484855 SH3BGRL3Q9H299 93 aa13.63□□□□□ -0.23
CTSA-207ENST00000484855 PATZ1Q9HBE1 687 aaKnown RBP13.63□□□□□ -0.23
CTSA-207ENST00000484855 HRASP01112 189 aa13.62□□□□□ -0.23
CTSA-207ENST00000484855 IFNA17P01571 189 aa13.62□□□□□ -0.23
CTSA-207ENST00000484855 RBP4P02753 201 aa13.62□□□□□ -0.23
CTSA-207ENST00000484855 REG1BP48304 166 aa13.62□□□□□ -0.23
CTSA-207ENST00000484855 EFNA4P52798 201 aa13.62□□□□□ -0.23
CTSA-207ENST00000484855 HBG1P69891 147 aa13.62□□□□□ -0.23
CTSA-207ENST00000484855 HBG2P69892 147 aa13.62□□□□□ -0.23
CTSA-207ENST00000484855 RELBQ01201 579 aa13.62□□□□□ -0.23
CTSA-207ENST00000484855 OR4A47Q6IF82 309 aa13.62□□□□□ -0.23
CTSA-207ENST00000484855 HSD17B13Q7Z5P4 300 aaPredicted RBP13.62□□□□□ -0.23
CTSA-207ENST00000484855 OR13D1Q8NGV5 346 aa13.62□□□□□ -0.23
CTSA-207ENST00000484855 SAT2Q96F10 170 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms