RNA–Protein interactions for RNA: ENST00000479544.6

USP42-206, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 1 (best)

Gene USP42, Length 4,286 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-206ENST00000479544 OR4A47Q6IF82 309 aa11.52□□□□□ -0.57
USP42-206ENST00000479544 SSX8Q7RTT4 187 aa11.52□□□□□ -0.57
USP42-206ENST00000479544 OR5A2Q8NGI9 324 aa11.52□□□□□ -0.57
USP42-206ENST00000479544 SFRP2Q96HF1 295 aa11.52□□□□□ -0.57
USP42-206ENST00000479544 QTRT1Q9BXR0 403 aaKnown RBP11.52□□□□□ -0.57
USP42-206ENST00000479544 IGKV3D-11A0A0A0MRZ8 115 aa11.51□□□□□ -0.57
USP42-206ENST00000479544 IFNL4K9M1U5 179 aa11.51□□□□□ -0.57
USP42-206ENST00000479544 PAFAH1B2P68402 229 aa11.51□□□□□ -0.57
USP42-206ENST00000479544 SPSB3Q6PJ21 355 aa11.51□□□□□ -0.57
USP42-206ENST00000479544 ZCCHC14Q8WYQ9 949 aaKnown RBP11.51□□□□□ -0.57
USP42-206ENST00000479544 LEAP2Q969E1 77 aa11.51□□□□□ -0.57
USP42-206ENST00000479544 IGHV3-21A0A0B4J1V1 117 aa11.51□□□□□ -0.57
USP42-206ENST00000479544 ZNF891A8MT65 544 aaPredicted RBP11.51□□□□□ -0.57
USP42-206ENST00000479544 OR2H2O95918 312 aa11.51□□□□□ -0.57
USP42-206ENST00000479544 CCL11P51671 97 aa11.51□□□□□ -0.57
USP42-206ENST00000479544 C10orf91Q5T1B1 145 aa11.51□□□□□ -0.57
USP42-206ENST00000479544 MOB1BQ7L9L4 216 aa11.51□□□□□ -0.57
USP42-206ENST00000479544 OR4D5Q8NGN0 318 aa11.51□□□□□ -0.57
USP42-206ENST00000479544 PLA2G2EQ9NZK7 142 aa11.51□□□□□ -0.57
USP42-206ENST00000479544 FBLN5Q9UBX5 448 aa11.51□□□□□ -0.57
USP42-206ENST00000479544 SLC45A2Q9UMX9 530 aa11.51□□□□□ -0.57
USP42-206ENST00000479544 IGKV1-27A0A075B6S5 117 aa11.51□□□□□ -0.57
USP42-206ENST00000479544 APCSP02743 223 aa11.51□□□□□ -0.57
USP42-206ENST00000479544 FOXA3P55318 350 aaPredicted RBP11.51□□□□□ -0.57
USP42-206ENST00000479544 SMIM21Q3B7S5 101 aa11.51□□□□□ -0.57
USP42-206ENST00000479544 MMD2Q8IY49 270 aa11.51□□□□□ -0.57
USP42-206ENST00000479544 SLC25A45Q8N413 288 aa11.51□□□□□ -0.57
USP42-206ENST00000479544 DERL1Q9BUN8 251 aa11.51□□□□□ -0.57
USP42-206ENST00000479544 LAMA3Q16787 3333 aa11.51□□□□□ -0.57
USP42-206ENST00000479544 A0A1W2PRD5 423 aa11.5□□□□□ -0.57
USP42-206ENST00000479544 A0A1W2PRF3 423 aa11.5□□□□□ -0.57
USP42-206ENST00000479544 A0A1W2PRM7 423 aa11.5□□□□□ -0.57
USP42-206ENST00000479544 TMEM250H0YL14 139 aa11.5□□□□□ -0.57
USP42-206ENST00000479544 OPRK1P41145 380 aa11.5□□□□□ -0.57
USP42-206ENST00000479544 ID3Q02535 119 aa11.5□□□□□ -0.57
USP42-206ENST00000479544 CEACAM21Q3KPI0 293 aa11.5□□□□□ -0.57
USP42-206ENST00000479544 DNM1P46Q6ZS02 220 aa11.5□□□□□ -0.57
USP42-206ENST00000479544 SMIM15Q7Z3B0 74 aa11.5□□□□□ -0.57
USP42-206ENST00000479544 OR2T6Q8NHC8 308 aa11.5□□□□□ -0.57
USP42-206ENST00000479544 LRRC29Q8WV35 223 aa11.5□□□□□ -0.57
USP42-206ENST00000479544 CORO2AQ92828 525 aa11.5□□□□□ -0.57
USP42-206ENST00000479544 MRPL37Q9BZE1 423 aaKnown RBP11.5□□□□□ -0.57
USP42-206ENST00000479544 SCO2A0A1W2PP80 73 aa11.5□□□□□ -0.57
USP42-206ENST00000479544 J3QT63 122 aa11.5□□□□□ -0.57
USP42-206ENST00000479544 RRHO14718 337 aa11.5□□□□□ -0.57
USP42-206ENST00000479544 MAGEA5P43359 124 aa11.5□□□□□ -0.57
USP42-206ENST00000479544 MUC15Q8N387 334 aa11.5□□□□□ -0.57
USP42-206ENST00000479544 UQCR10Q9UDW1 63 aa11.5□□□□□ -0.57
USP42-206ENST00000479544 TBL2Q9Y4P3 447 aaKnown RBP11.5□□□□□ -0.57
USP42-206ENST00000479544 AGFG2O95081 481 aa11.5□□□□□ -0.57
USP42-206ENST00000479544 TFF1P04155 84 aa11.5□□□□□ -0.57
USP42-206ENST00000479544 IFI6P09912 130 aa11.5□□□□□ -0.57
USP42-206ENST00000479544 OR5AL1P0C617 328 aa11.5□□□□□ -0.57
USP42-206ENST00000479544 LRRC75BQ2VPJ9 315 aa11.5□□□□□ -0.57
USP42-206ENST00000479544 WDR73Q6P4I2 378 aa11.5□□□□□ -0.57
USP42-206ENST00000479544 GTF2H5Q6ZYL4 71 aa11.5□□□□□ -0.57
USP42-206ENST00000479544 WDFY1Q8IWB7 410 aa11.5□□□□□ -0.57
USP42-206ENST00000479544 RPP25LQ8N5L8 163 aaKnown RBP11.5□□□□□ -0.57
USP42-206ENST00000479544 H3BTX0 84 aa11.49□□□□□ -0.57
USP42-206ENST00000479544 IGHEP01854 428 aa11.49□□□□□ -0.57
USP42-206ENST00000479544 HBZP02008 142 aa11.49□□□□□ -0.57
USP42-206ENST00000479544 LINC00271P0C7V0 271 aa11.49□□□□□ -0.57
USP42-206ENST00000479544 LEMD1Q68G75 181 aa11.49□□□□□ -0.57
USP42-206ENST00000479544 SEMA5BQ9P283 1151 aa11.49□□□□□ -0.57
USP42-206ENST00000479544 MPC1Q9Y5U8 109 aa11.49□□□□□ -0.57
USP42-206ENST00000479544 TNRC18O15417 2968 aaPredicted RBP11.49□□□□□ -0.57
USP42-206ENST00000479544 KLRC4-KLRK1H3BQV0 150 aa11.49□□□□□ -0.57
USP42-206ENST00000479544 TMEM50AO95807 157 aa11.49□□□□□ -0.57
USP42-206ENST00000479544 CXorf1O96002 111 aa11.49□□□□□ -0.57
USP42-206ENST00000479544 GNB2P62879 340 aa11.49□□□□□ -0.57
USP42-206ENST00000479544 OR5R1Q8NH85 324 aa11.49□□□□□ -0.57
USP42-206ENST00000479544 RND1Q92730 232 aa11.49□□□□□ -0.57
USP42-206ENST00000479544 PRDM13Q9H4Q3 707 aa11.49□□□□□ -0.57
USP42-206ENST00000479544 HTR1DP28221 377 aa11.49□□□□□ -0.57
USP42-206ENST00000479544 ERHP84090 104 aaKnown RBP11.49□□□□□ -0.57
USP42-206ENST00000479544 OR1C1Q15619 314 aa11.49□□□□□ -0.57
USP42-206ENST00000479544 OR4B1Q8NGF8 309 aa11.49□□□□□ -0.57
USP42-206ENST00000479544 POM121L2Q96KW2 1035 aa11.49□□□□□ -0.57
USP42-206ENST00000479544 SNHG12Q9BXW3 62 aa11.49□□□□□ -0.57
USP42-206ENST00000479544 TRBV24-1A0A075B6N3 115 aa11.49□□□□□ -0.57
USP42-206ENST00000479544 IGHV3OR15-7A0A075B7D8 119 aa11.49□□□□□ -0.57
USP42-206ENST00000479544 CA11O75493 328 aa11.49□□□□□ -0.57
USP42-206ENST00000479544 PRB4P10163 310 aaPredicted RBP11.49□□□□□ -0.57
USP42-206ENST00000479544 NPY1RP25929 384 aa11.49□□□□□ -0.57
USP42-206ENST00000479544 ADMP35318 185 aa11.49□□□□□ -0.57
USP42-206ENST00000479544 TEX38Q6PEX7 206 aa11.49□□□□□ -0.57
USP42-206ENST00000479544 PRSS3P2Q8NHM4 247 aa11.49□□□□□ -0.57
USP42-206ENST00000479544 FGFBP3Q8TAT2 258 aa11.49□□□□□ -0.57
USP42-206ENST00000479544 TMEM170AQ8WVE7 144 aa11.49□□□□□ -0.57
USP42-206ENST00000479544 DEPPQ9NTK1 212 aa11.49□□□□□ -0.57
USP42-206ENST00000479544 FNDC1Q4ZHG4 1894 aaPredicted RBP11.49□□□□□ -0.57
USP42-206ENST00000479544 ANAPC1Q9H1A4 1944 aa11.48□□□□□ -0.57
USP42-206ENST00000479544 IGHV5-10-1A0A0J9YXX1 117 aa11.48□□□□□ -0.57
USP42-206ENST00000479544 ODAMA1E959 279 aa11.48□□□□□ -0.57
USP42-206ENST00000479544 A8MWP6 167 aa11.48□□□□□ -0.57
USP42-206ENST00000479544 RFPL3SP0C7P2 107 aa11.48□□□□□ -0.57
USP42-206ENST00000479544 ABLIM2Q6H8Q1 611 aa11.48□□□□□ -0.57
USP42-206ENST00000479544 FLYWCH2Q96CP2 140 aaKnown RBP11.48□□□□□ -0.57
USP42-206ENST00000479544 SF3B5Q9BWJ5 86 aaKnown RBP11.48□□□□□ -0.57
USP42-206ENST00000479544 TMEM106BQ9NUM4 274 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms