RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 EAF1Q96JC9 268 aaPredicted RBP6.57□□□□□ -1.36
HDAC6-221ENST00000477561 ALX4Q9H161 411 aaPredicted RBP6.57□□□□□ -1.36
HDAC6-221ENST00000477561 LINC00527Q9UJ94 153 aa6.57□□□□□ -1.36
HDAC6-221ENST00000477561 ALG5Q9Y673 324 aa6.57□□□□□ -1.36
HDAC6-221ENST00000477561 C7orf66A4D0T2 115 aa6.56□□□□□ -1.36
HDAC6-221ENST00000477561 LINC01548A6NM66 108 aa6.56□□□□□ -1.36
HDAC6-221ENST00000477561 ADARB2-AS1A8MUL3 147 aa6.56□□□□□ -1.36
HDAC6-221ENST00000477561 M0QZK8 103 aa6.56□□□□□ -1.36
HDAC6-221ENST00000477561 ST8SIA5O15466 376 aa6.56□□□□□ -1.36
HDAC6-221ENST00000477561 PGAM2P15259 253 aa6.56□□□□□ -1.36
HDAC6-221ENST00000477561 RAB25P57735 213 aa6.56□□□□□ -1.36
HDAC6-221ENST00000477561 UBE2MP61081 183 aaKnown RBP6.56□□□□□ -1.36
HDAC6-221ENST00000477561 HERV-K104P61576 105 aa6.56□□□□□ -1.36
HDAC6-221ENST00000477561 HTD2P86397 168 aa6.56□□□□□ -1.36
HDAC6-221ENST00000477561 EBI3Q14213 229 aa6.56□□□□□ -1.36
HDAC6-221ENST00000477561 HMGN3Q15651 99 aa6.56□□□□□ -1.36
HDAC6-221ENST00000477561 TMEM30BQ3MIR4 351 aa6.56□□□□□ -1.36
HDAC6-221ENST00000477561 Q3ZCU0 254 aa6.56□□□□□ -1.36
HDAC6-221ENST00000477561 TCTEX1D4Q5JR98 221 aa6.56□□□□□ -1.36
HDAC6-221ENST00000477561 ZNF329Q86UD4 541 aa6.56□□□□□ -1.36
HDAC6-221ENST00000477561 LHFPL1Q86WI0 220 aa6.56□□□□□ -1.36
HDAC6-221ENST00000477561 CADM3Q8N126 398 aa6.56□□□□□ -1.36
HDAC6-221ENST00000477561 OR2T10Q8NGZ9 312 aa6.56□□□□□ -1.36
HDAC6-221ENST00000477561 ZFAND1Q8TCF1 268 aa6.56□□□□□ -1.36
HDAC6-221ENST00000477561 GIMAP1Q8WWP7 306 aa6.56□□□□□ -1.36
HDAC6-221ENST00000477561 PPP1R14BQ96C90 147 aa6.56□□□□□ -1.36
HDAC6-221ENST00000477561 R3HDM4Q96D70 268 aa6.56□□□□□ -1.36
HDAC6-221ENST00000477561 NOL4LQ96MY1 436 aaPredicted RBP6.56□□□□□ -1.36
HDAC6-221ENST00000477561 ZNF2Q9BSG1 426 aaPredicted RBP6.56□□□□□ -1.36
HDAC6-221ENST00000477561 CABLES2Q9BTV7 478 aa6.56□□□□□ -1.36
HDAC6-221ENST00000477561 ABHD14AQ9BUJ0 271 aa6.56□□□□□ -1.36
HDAC6-221ENST00000477561 PARP12Q9H0J9 701 aaKnown RBP6.56□□□□□ -1.36
HDAC6-221ENST00000477561 SLC23A1Q9UHI7 598 aa6.56□□□□□ -1.36
HDAC6-221ENST00000477561 JPT1Q9UK76 154 aa6.56□□□□□ -1.36
HDAC6-221ENST00000477561 FLVCR2Q9UPI3 526 aa6.56□□□□□ -1.36
HDAC6-221ENST00000477561 C14orf166Q9Y224 244 aaKnown RBP6.56□□□□□ -1.36
HDAC6-221ENST00000477561 TCRBV4S1A1TA0A5B7 111 aa6.55□□□□□ -1.36
HDAC6-221ENST00000477561 HMX3A6NHT5 357 aa6.55□□□□□ -1.36
HDAC6-221ENST00000477561 SNRPGP15A8MWD9 76 aa6.55□□□□□ -1.36
HDAC6-221ENST00000477561 FGF16O43320 207 aa6.55□□□□□ -1.36
HDAC6-221ENST00000477561 CREBL2O60519 120 aaPredicted RBP6.55□□□□□ -1.36
HDAC6-221ENST00000477561 YPEL1O60688 119 aa6.55□□□□□ -1.36
HDAC6-221ENST00000477561 RGS11O94810 467 aa6.55□□□□□ -1.36
HDAC6-221ENST00000477561 SCTP09683 121 aa6.55□□□□□ -1.36
HDAC6-221ENST00000477561 ANXA7P20073 488 aaKnown RBP6.55□□□□□ -1.36
HDAC6-221ENST00000477561 CD1BP29016 333 aa6.55□□□□□ -1.36
HDAC6-221ENST00000477561 FCGR2CP31995 323 aa6.55□□□□□ -1.36
HDAC6-221ENST00000477561 CEACAM6P40199 344 aa6.55□□□□□ -1.36
HDAC6-221ENST00000477561 ZNF137PP52743 207 aa6.55□□□□□ -1.36
HDAC6-221ENST00000477561 F2RL1P55085 397 aa6.55□□□□□ -1.36
HDAC6-221ENST00000477561 CD83Q01151 205 aa6.55□□□□□ -1.36
HDAC6-221ENST00000477561 CBX3Q13185 183 aa6.55□□□□□ -1.36
HDAC6-221ENST00000477561 C4orf46Q504U0 113 aa6.55□□□□□ -1.36
HDAC6-221ENST00000477561 KHDC1LQ5JSQ8 128 aa6.55□□□□□ -1.36
HDAC6-221ENST00000477561 LPCAT3Q6P1A2 487 aa6.55□□□□□ -1.36
HDAC6-221ENST00000477561 GLDNQ6ZMI3 551 aaPredicted RBP6.55□□□□□ -1.36
HDAC6-221ENST00000477561 TMED4Q7Z7H5 227 aa6.55□□□□□ -1.36
HDAC6-221ENST00000477561 NDUFA11Q86Y39 141 aa6.55□□□□□ -1.36
HDAC6-221ENST00000477561 ODF3L1Q8IXM7 274 aa6.55□□□□□ -1.36
HDAC6-221ENST00000477561 Q8N6K4 173 aa6.55□□□□□ -1.36
HDAC6-221ENST00000477561 OR2AK2Q8NG84 335 aa6.55□□□□□ -1.36
HDAC6-221ENST00000477561 OR10J5Q8NHC4 309 aa6.55□□□□□ -1.36
HDAC6-221ENST00000477561 ABHD14BQ96IU4 210 aa6.55□□□□□ -1.36
HDAC6-221ENST00000477561 RITA1Q96K30 269 aa6.55□□□□□ -1.36
HDAC6-221ENST00000477561 YPEL2Q96QA6 119 aa6.55□□□□□ -1.36
HDAC6-221ENST00000477561 MRPL20Q9BYC9 149 aaKnown RBP6.55□□□□□ -1.36
HDAC6-221ENST00000477561 MED28Q9H204 178 aa6.55□□□□□ -1.36
HDAC6-221ENST00000477561 OR51J1Q9H342 316 aa6.55□□□□□ -1.36
HDAC6-221ENST00000477561 OR1A1Q9P1Q5 309 aa6.55□□□□□ -1.36
HDAC6-221ENST00000477561 GPR132Q9UNW8 380 aa6.55□□□□□ -1.36
HDAC6-221ENST00000477561 VSIG4Q9Y279 399 aa6.55□□□□□ -1.36
HDAC6-221ENST00000477561 WNK1Q9H4A3 2382 aa6.55□□□□□ -1.36
HDAC6-221ENST00000477561 SAA2-SAA4A0A096LPE2 208 aa6.54□□□□□ -1.36
HDAC6-221ENST00000477561 TRBV6-7A0A0A0MS04 114 aa6.54□□□□□ -1.36
HDAC6-221ENST00000477561 A0A0B4J293 547 aa6.54□□□□□ -1.36
HDAC6-221ENST00000477561 PSMB11A5LHX3 300 aa6.54□□□□□ -1.36
HDAC6-221ENST00000477561 OR5H14A6NHG9 310 aa6.54□□□□□ -1.36
HDAC6-221ENST00000477561 G3V4G9 280 aa6.54□□□□□ -1.36
HDAC6-221ENST00000477561 BET1O15155 118 aa6.54□□□□□ -1.36
HDAC6-221ENST00000477561 HSPA12AO43301 675 aa6.54□□□□□ -1.36
HDAC6-221ENST00000477561 TXNL1O43396 289 aa6.54□□□□□ -1.36
HDAC6-221ENST00000477561 SSNA1O43805 119 aa6.54□□□□□ -1.36
HDAC6-221ENST00000477561 MOSP00540 346 aa6.54□□□□□ -1.36
HDAC6-221ENST00000477561 PPYP01298 95 aa6.54□□□□□ -1.36
HDAC6-221ENST00000477561 OPN1MWP04001 364 aa6.54□□□□□ -1.36
HDAC6-221ENST00000477561 CTSDP07339 412 aaPredicted RBP6.54□□□□□ -1.36
HDAC6-221ENST00000477561 SAA2P0DJI9 122 aaPredicted RBP6.54□□□□□ -1.36
HDAC6-221ENST00000477561 OPN1MW2P0DN77 364 aa6.54□□□□□ -1.36
HDAC6-221ENST00000477561 OPN1MW3P0DN78 364 aa6.54□□□□□ -1.36
HDAC6-221ENST00000477561 ZBTB25P24278 435 aa6.54□□□□□ -1.36
HDAC6-221ENST00000477561 CNTFRP26992 372 aa6.54□□□□□ -1.36
HDAC6-221ENST00000477561 S100GP29377 79 aa6.54□□□□□ -1.36
HDAC6-221ENST00000477561 UCP3P55916 312 aa6.54□□□□□ -1.36
HDAC6-221ENST00000477561 RRAS2P62070 204 aaPredicted RBP6.54□□□□□ -1.36
HDAC6-221ENST00000477561 RPL39P5Q59GN2 51 aa6.54□□□□□ -1.36
HDAC6-221ENST00000477561 IGSF11Q5DX21 431 aa6.54□□□□□ -1.36
HDAC6-221ENST00000477561 AADACL3Q5VUY0 350 aa6.54□□□□□ -1.36
HDAC6-221ENST00000477561 ZNF660Q6AZW8 331 aaPredicted RBP6.54□□□□□ -1.36
HDAC6-221ENST00000477561 SLC35E3Q7Z769 313 aa6.54□□□□□ -1.36
HDAC6-221ENST00000477561 AKAP14Q86UN6 197 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms