RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 TM2D1Q9BX74 207 aa12.24□□□□□ -0.45
APOBEC3F-203ENST00000476513 TMEM59Q9BXS4 323 aa12.24□□□□□ -0.45
APOBEC3F-203ENST00000476513 RIMS4Q9H426 269 aaPredicted RBP12.24□□□□□ -0.45
APOBEC3F-203ENST00000476513 PLEKHJ1Q9NW61 149 aa12.24□□□□□ -0.45
APOBEC3F-203ENST00000476513 MLXQ9UH92 298 aa12.24□□□□□ -0.45
APOBEC3F-203ENST00000476513 AK3Q9UIJ7 227 aa12.24□□□□□ -0.45
APOBEC3F-203ENST00000476513 IGKV1-6A0A0C4DH72 117 aa12.23□□□□□ -0.45
APOBEC3F-203ENST00000476513 LOC100130705A0A1B0GUX0 176 aa12.23□□□□□ -0.45
APOBEC3F-203ENST00000476513 PRR20EP86478 221 aa12.23□□□□□ -0.45
APOBEC3F-203ENST00000476513 PRR20CP86479 221 aa12.23□□□□□ -0.45
APOBEC3F-203ENST00000476513 PRR20DP86480 221 aa12.23□□□□□ -0.45
APOBEC3F-203ENST00000476513 PRR20BP86481 221 aa12.23□□□□□ -0.45
APOBEC3F-203ENST00000476513 PRR20AP86496 221 aa12.23□□□□□ -0.45
APOBEC3F-203ENST00000476513 C15orf32Q32M92 178 aa12.23□□□□□ -0.45
APOBEC3F-203ENST00000476513 ZNF485Q8NCK3 441 aa12.23□□□□□ -0.45
APOBEC3F-203ENST00000476513 KCNK15Q9H427 330 aa12.23□□□□□ -0.45
APOBEC3F-203ENST00000476513 Q9N2K0 584 aa12.23□□□□□ -0.45
APOBEC3F-203ENST00000476513 RDH8Q9NYR8 311 aa12.23□□□□□ -0.45
APOBEC3F-203ENST00000476513 DIMT1Q9UNQ2 313 aaKnown RBP12.23□□□□□ -0.45
APOBEC3F-203ENST00000476513 EXOSC1Q9Y3B2 195 aaKnown RBP12.23□□□□□ -0.45
APOBEC3F-203ENST00000476513 A0A0A6YYD4 124 aa12.22□□□□□ -0.45
APOBEC3F-203ENST00000476513 PNMA8CA0A1B0GUJ8 204 aa12.22□□□□□ -0.45
APOBEC3F-203ENST00000476513 TMEM213A2RRL7 107 aa12.22□□□□□ -0.45
APOBEC3F-203ENST00000476513 OR2J3O76001 311 aa12.22□□□□□ -0.45
APOBEC3F-203ENST00000476513 MYL12AP19105 171 aa12.22□□□□□ -0.45
APOBEC3F-203ENST00000476513 APOC4P55056 127 aa12.22□□□□□ -0.45
APOBEC3F-203ENST00000476513 UNC119Q13432 240 aa12.22□□□□□ -0.45
APOBEC3F-203ENST00000476513 ANKRD55Q3KP44 614 aa12.22□□□□□ -0.45
APOBEC3F-203ENST00000476513 FAM209BQ5JX69 171 aa12.22□□□□□ -0.45
APOBEC3F-203ENST00000476513 IDO2Q6ZQW0 420 aa12.22□□□□□ -0.45
APOBEC3F-203ENST00000476513 GPHB5Q86YW7 130 aa12.22□□□□□ -0.45
APOBEC3F-203ENST00000476513 TEX45Q8NA69 505 aa12.22□□□□□ -0.45
APOBEC3F-203ENST00000476513 UXS1Q8NBZ7 420 aa12.22□□□□□ -0.45
APOBEC3F-203ENST00000476513 MGAT4AQ9UM21 535 aa12.22□□□□□ -0.45
APOBEC3F-203ENST00000476513 UBE2KP61086 200 aa12.21□□□□□ -0.45
APOBEC3F-203ENST00000476513 CBX3Q13185 183 aa12.21□□□□□ -0.45
APOBEC3F-203ENST00000476513 VMA21Q3ZAQ7 101 aa12.21□□□□□ -0.45
APOBEC3F-203ENST00000476513 TTC9CQ8N5M4 171 aa12.21□□□□□ -0.45
APOBEC3F-203ENST00000476513 TMEM217Q8N7C4 229 aa12.21□□□□□ -0.45
APOBEC3F-203ENST00000476513 ACOT12Q8WYK0 555 aa12.21□□□□□ -0.45
APOBEC3F-203ENST00000476513 RNF183Q96D59 192 aa12.21□□□□□ -0.45
APOBEC3F-203ENST00000476513 C5orf30Q96GV9 206 aa12.21□□□□□ -0.45
APOBEC3F-203ENST00000476513 SDHAF2Q9NX18 166 aa12.21□□□□□ -0.45
APOBEC3F-203ENST00000476513 ZNF320A2RRD8 509 aa12.2□□□□□ -0.46
APOBEC3F-203ENST00000476513 UBE2CO00762 179 aa12.2□□□□□ -0.46
APOBEC3F-203ENST00000476513 SOCS1O15524 211 aa12.2□□□□□ -0.46
APOBEC3F-203ENST00000476513 QRFPP83859 136 aa12.2□□□□□ -0.46
APOBEC3F-203ENST00000476513 TAGLNQ01995 201 aaKnown RBP12.2□□□□□ -0.46
APOBEC3F-203ENST00000476513 RTL8BQ17RB0 113 aa12.2□□□□□ -0.46
APOBEC3F-203ENST00000476513 C1orf100Q5SVJ3 147 aa12.2□□□□□ -0.46
APOBEC3F-203ENST00000476513 BTNL8Q6UX41 500 aa12.2□□□□□ -0.46
APOBEC3F-203ENST00000476513 GGHQ92820 318 aa12.2□□□□□ -0.46
APOBEC3F-203ENST00000476513 OR2D2Q9H210 308 aa12.2□□□□□ -0.46
APOBEC3F-203ENST00000476513 IRGMA1A4Y4 181 aa12.19□□□□□ -0.46
APOBEC3F-203ENST00000476513 TMEM14DPA8MWL7 114 aa12.19□□□□□ -0.46
APOBEC3F-203ENST00000476513 A8MWP6 167 aa12.19□□□□□ -0.46
APOBEC3F-203ENST00000476513 IGHV3-23P01764 117 aa12.19□□□□□ -0.46
APOBEC3F-203ENST00000476513 SRMP19623 302 aa12.19□□□□□ -0.46
APOBEC3F-203ENST00000476513 C10orf55Q5SWW7 151 aa12.19□□□□□ -0.46
APOBEC3F-203ENST00000476513 OR1L6Q8NGR2 347 aa12.19□□□□□ -0.46
APOBEC3F-203ENST00000476513 CCDC140Q96MF4 163 aa12.19□□□□□ -0.46
APOBEC3F-203ENST00000476513 SPIN2AQ99865 258 aa12.19□□□□□ -0.46
APOBEC3F-203ENST00000476513 SPIN2BQ9BPZ2 258 aa12.19□□□□□ -0.46
APOBEC3F-203ENST00000476513 ZNF430Q9H8G1 570 aaPredicted RBP12.19□□□□□ -0.46
APOBEC3F-203ENST00000476513 C12orf4Q9NQ89 552 aa12.19□□□□□ -0.46
APOBEC3F-203ENST00000476513 FBXL7Q9UJT9 491 aa12.19□□□□□ -0.46
APOBEC3F-203ENST00000476513 TRAV25A0A0B4J276 109 aa12.18□□□□□ -0.46
APOBEC3F-203ENST00000476513 EBAG9O00559 213 aa12.18□□□□□ -0.46
APOBEC3F-203ENST00000476513 CD3GP09693 182 aa12.18□□□□□ -0.46
APOBEC3F-203ENST00000476513 RRASP10301 218 aa12.18□□□□□ -0.46
APOBEC3F-203ENST00000476513 MAPK3P27361 379 aaPredicted RBP12.18□□□□□ -0.46
APOBEC3F-203ENST00000476513 ARL3P36405 182 aa12.18□□□□□ -0.46
APOBEC3F-203ENST00000476513 MAP2K4P45985 399 aa12.18□□□□□ -0.46
APOBEC3F-203ENST00000476513 TAS2R43P59537 309 aa12.18□□□□□ -0.46
APOBEC3F-203ENST00000476513 FAM106AQ4KMX7 169 aa12.18□□□□□ -0.46
APOBEC3F-203ENST00000476513 CLEC19AQ6UXS0 136 aa12.18□□□□□ -0.46
APOBEC3F-203ENST00000476513 C19orf35Q6ZS72 473 aa12.18□□□□□ -0.46
APOBEC3F-203ENST00000476513 LPAR5Q9H1C0 372 aa12.18□□□□□ -0.46
APOBEC3F-203ENST00000476513 KIR2DL5BA0A0G2JN68 375 aa12.17□□□□□ -0.46
APOBEC3F-203ENST00000476513 KIR2DL5BA0A0G2JPC4 375 aa12.17□□□□□ -0.46
APOBEC3F-203ENST00000476513 TRDCB7Z8K6 153 aa12.17□□□□□ -0.46
APOBEC3F-203ENST00000476513 CIB2O75838 187 aa12.17□□□□□ -0.46
APOBEC3F-203ENST00000476513 CRYZL1O95825 349 aa12.17□□□□□ -0.46
APOBEC3F-203ENST00000476513 CD1AP06126 327 aa12.17□□□□□ -0.46
APOBEC3F-203ENST00000476513 CELP19835 753 aa12.17□□□□□ -0.46
APOBEC3F-203ENST00000476513 MED21Q13503 144 aa12.17□□□□□ -0.46
APOBEC3F-203ENST00000476513 INSL4Q14641 139 aa12.17□□□□□ -0.46
APOBEC3F-203ENST00000476513 GLT8D1Q68CQ7 371 aa12.17□□□□□ -0.46
APOBEC3F-203ENST00000476513 CEACAM19Q7Z692 300 aa12.17□□□□□ -0.46
APOBEC3F-203ENST00000476513 LRRTM1Q86UE6 522 aa12.17□□□□□ -0.46
APOBEC3F-203ENST00000476513 SLC25A42Q86VD7 318 aa12.17□□□□□ -0.46
APOBEC3F-203ENST00000476513 KIR2DL5AQ8N109 375 aa12.17□□□□□ -0.46
APOBEC3F-203ENST00000476513 OR2C3Q8N628 320 aa12.17□□□□□ -0.46
APOBEC3F-203ENST00000476513 STPG3Q8N7X2 389 aa12.17□□□□□ -0.46
APOBEC3F-203ENST00000476513 KIR2DL5BQ8NHK3 375 aa12.17□□□□□ -0.46
APOBEC3F-203ENST00000476513 TMEM80Q96HE8 168 aa12.17□□□□□ -0.46
APOBEC3F-203ENST00000476513 UBQLN2Q9UHD9 624 aa12.17□□□□□ -0.46
APOBEC3F-203ENST00000476513 ZNF257Q9Y2Q1 563 aa12.17□□□□□ -0.46
APOBEC3F-203ENST00000476513 S4R3C0 116 aa12.17□□□□□ -0.46
APOBEC3F-203ENST00000476513 HMX3A6NHT5 357 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms