RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 OR2W1Q9Y3N9 320 aa4.23□□□□□ -1.73
CCDC39-204ENST00000476379 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.23□□□□□ -1.73
CCDC39-204ENST00000476379 A1L4Q6 167 aa4.23□□□□□ -1.73
CCDC39-204ENST00000476379 FCN1O00602 326 aa4.23□□□□□ -1.73
CCDC39-204ENST00000476379 KLF7O75840 302 aaPredicted RBP4.23□□□□□ -1.73
CCDC39-204ENST00000476379 ZNF25P17030 456 aaPredicted RBP4.23□□□□□ -1.73
CCDC39-204ENST00000476379 LSM6P62312 80 aaKnown RBP4.23□□□□□ -1.73
CCDC39-204ENST00000476379 ARL16Q0P5N6 197 aa4.23□□□□□ -1.73
CCDC39-204ENST00000476379 FOXO1Q12778 655 aa4.23□□□□□ -1.73
CCDC39-204ENST00000476379 KRTCAP3Q53RY4 240 aa4.23□□□□□ -1.73
CCDC39-204ENST00000476379 STUMQ69YW2 141 aa4.23□□□□□ -1.73
CCDC39-204ENST00000476379 HIST2H2BCQ6DN03 193 aa4.23□□□□□ -1.73
CCDC39-204ENST00000476379 HCP5Q6MZN7 132 aa4.23□□□□□ -1.73
CCDC39-204ENST00000476379 VWA1Q6PCB0 445 aa4.23□□□□□ -1.73
CCDC39-204ENST00000476379 KCNIP4Q6PIL6 250 aa4.23□□□□□ -1.73
CCDC39-204ENST00000476379 ZNF600Q6ZNG1 722 aa4.23□□□□□ -1.73
CCDC39-204ENST00000476379 FAM19A2Q8N3H0 131 aa4.23□□□□□ -1.73
CCDC39-204ENST00000476379 OR2M7Q8NG81 312 aa4.23□□□□□ -1.73
CCDC39-204ENST00000476379 KCNE4Q8WWG9 221 aa4.23□□□□□ -1.73
CCDC39-204ENST00000476379 NANOS1Q8WY41 292 aaKnown RBP4.23□□□□□ -1.73
CCDC39-204ENST00000476379 RCC1LQ96I51 464 aaKnown RBP4.23□□□□□ -1.73
CCDC39-204ENST00000476379 MS4A10Q96PG2 267 aa4.23□□□□□ -1.73
CCDC39-204ENST00000476379 PNRC2Q9NPJ4 139 aaKnown RBP4.23□□□□□ -1.73
CCDC39-204ENST00000476379 KLF13Q9Y2Y9 288 aaPredicted RBP4.23□□□□□ -1.73
CCDC39-204ENST00000476379 IGHV3OR16-13A0A075B7E8 117 aa4.22□□□□□ -1.73
CCDC39-204ENST00000476379 IGHV3-74A0A0B4J1X5 117 aa4.22□□□□□ -1.73
CCDC39-204ENST00000476379 HSPB2A8KAH6 182 aa4.22□□□□□ -1.73
CCDC39-204ENST00000476379 HAND1O96004 215 aa4.22□□□□□ -1.73
CCDC39-204ENST00000476379 S100A8P05109 93 aa4.22□□□□□ -1.73
CCDC39-204ENST00000476379 CD24P25063 80 aa4.22□□□□□ -1.73
CCDC39-204ENST00000476379 SRD5A2P31213 254 aa4.22□□□□□ -1.73
CCDC39-204ENST00000476379 PTGDSP41222 190 aa4.22□□□□□ -1.73
CCDC39-204ENST00000476379 CDC34P49427 236 aaPredicted RBP4.22□□□□□ -1.73
CCDC39-204ENST00000476379 HSPB2Q16082 182 aa4.22□□□□□ -1.73
CCDC39-204ENST00000476379 ZNF766Q5HY98 468 aa4.22□□□□□ -1.73
CCDC39-204ENST00000476379 DCAF10Q5QP82 559 aa4.22□□□□□ -1.73
CCDC39-204ENST00000476379 PEAR1Q5VY43 1037 aaPredicted RBP4.22□□□□□ -1.73
CCDC39-204ENST00000476379 DHRS7BQ6IAN0 325 aaPredicted RBP4.22□□□□□ -1.73
CCDC39-204ENST00000476379 WDR74Q6RFH5 385 aaPredicted RBP4.22□□□□□ -1.73
CCDC39-204ENST00000476379 DBX2Q6ZNG2 339 aa4.22□□□□□ -1.73
CCDC39-204ENST00000476379 RAB24Q969Q5 203 aa4.22□□□□□ -1.73
CCDC39-204ENST00000476379 WDYHV1Q96HA8 205 aa4.22□□□□□ -1.73
CCDC39-204ENST00000476379 C1orf147Q96MC9 270 aaPredicted RBP4.22□□□□□ -1.73
CCDC39-204ENST00000476379 WNT10AQ9GZT5 417 aa4.22□□□□□ -1.73
CCDC39-204ENST00000476379 RIMS4Q9H426 269 aaPredicted RBP4.22□□□□□ -1.73
CCDC39-204ENST00000476379 UBR5O95071 2799 aaPredicted RBP4.22□□□□□ -1.73
CCDC39-204ENST00000476379 KLRC4-KLRK1H3BQV0 150 aa4.22□□□□□ -1.73
CCDC39-204ENST00000476379 HIST1H2BKO60814 126 aa4.22□□□□□ -1.73
CCDC39-204ENST00000476379 HBZP02008 142 aa4.22□□□□□ -1.73
CCDC39-204ENST00000476379 HIST1H2BJP06899 126 aa4.22□□□□□ -1.73
CCDC39-204ENST00000476379 COX5AP20674 150 aa4.22□□□□□ -1.73
CCDC39-204ENST00000476379 HIST1H2BOP23527 126 aa4.22□□□□□ -1.73
CCDC39-204ENST00000476379 HIST1H2BBP33778 126 aa4.22□□□□□ -1.73
CCDC39-204ENST00000476379 MPV17P39210 176 aa4.22□□□□□ -1.73
CCDC39-204ENST00000476379 LHX2P50458 406 aa4.22□□□□□ -1.73
CCDC39-204ENST00000476379 SUMO3P55854 103 aaPredicted RBP4.22□□□□□ -1.73
CCDC39-204ENST00000476379 HIST1H2BDP58876 126 aa4.22□□□□□ -1.73
CCDC39-204ENST00000476379 HIST1H2BCP62807 126 aa4.22□□□□□ -1.73
CCDC39-204ENST00000476379 COL10A1Q03692 680 aa4.22□□□□□ -1.73
CCDC39-204ENST00000476379 PSG5Q15238 335 aa4.22□□□□□ -1.73
CCDC39-204ENST00000476379 MLANAQ16655 118 aa4.22□□□□□ -1.73
CCDC39-204ENST00000476379 HIST2H2BEQ16778 126 aa4.22□□□□□ -1.73
CCDC39-204ENST00000476379 RSPO1Q2MKA7 263 aaPredicted RBP4.22□□□□□ -1.73
CCDC39-204ENST00000476379 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.22□□□□□ -1.73
CCDC39-204ENST00000476379 FAHD2BQ6P2I3 314 aaPredicted RBP4.22□□□□□ -1.73
CCDC39-204ENST00000476379 MOB3BQ86TA1 216 aa4.22□□□□□ -1.73
CCDC39-204ENST00000476379 C1QL4Q86Z23 238 aa4.22□□□□□ -1.73
CCDC39-204ENST00000476379 RPRMLQ8N4K4 120 aa4.22□□□□□ -1.73
CCDC39-204ENST00000476379 DRAM1Q8N682 238 aa4.22□□□□□ -1.73
CCDC39-204ENST00000476379 ARL6IP6Q8N6S5 226 aa4.22□□□□□ -1.73
CCDC39-204ENST00000476379 HIST1H2BHQ93079 126 aa4.22□□□□□ -1.73
CCDC39-204ENST00000476379 SNRNP40Q96DI7 357 aaKnown RBP4.22□□□□□ -1.73
CCDC39-204ENST00000476379 FAHD2AQ96GK7 314 aa4.22□□□□□ -1.73
CCDC39-204ENST00000476379 HIST1H2BNQ99877 126 aa4.22□□□□□ -1.73
CCDC39-204ENST00000476379 HIST1H2BMQ99879 126 aa4.22□□□□□ -1.73
CCDC39-204ENST00000476379 TCEAL7Q9BRU2 100 aa4.22□□□□□ -1.73
CCDC39-204ENST00000476379 HIPK2Q9H2X6 1198 aa4.22□□□□□ -1.73
CCDC39-204ENST00000476379 ZNF355PQ9NSJ1 428 aa4.22□□□□□ -1.73
CCDC39-204ENST00000476379 ZNF835Q9Y2P0 537 aa4.22□□□□□ -1.73
CCDC39-204ENST00000476379 HIVEP2P31629 2446 aa4.22□□□□□ -1.73
CCDC39-204ENST00000476379 KIAA1549LQ6ZVL6 1849 aa4.22□□□□□ -1.73
CCDC39-204ENST00000476379 RPL36A-HNRNPH2H7BZ11 118 aa4.22□□□□□ -1.73
CCDC39-204ENST00000476379 SYNGR3O43761 229 aa4.22□□□□□ -1.73
CCDC39-204ENST00000476379 NAPSAO96009 420 aa4.22□□□□□ -1.73
CCDC39-204ENST00000476379 PRF1P14222 555 aa4.22□□□□□ -1.73
CCDC39-204ENST00000476379 QRFPP83859 136 aa4.22□□□□□ -1.73
CCDC39-204ENST00000476379 IL13RA2Q14627 380 aa4.22□□□□□ -1.73
CCDC39-204ENST00000476379 MOB3AQ96BX8 217 aa4.22□□□□□ -1.73
CCDC39-204ENST00000476379 UHRF2Q96PU4 802 aa4.22□□□□□ -1.73
CCDC39-204ENST00000476379 CCL13Q99616 98 aa4.22□□□□□ -1.73
CCDC39-204ENST00000476379 CTDSP1Q9GZU7 261 aa4.22□□□□□ -1.73
CCDC39-204ENST00000476379 DYNLRB1Q9NP97 96 aa4.22□□□□□ -1.73
CCDC39-204ENST00000476379 CLDN14O95500 239 aa4.21□□□□□ -1.73
CCDC39-204ENST00000476379 CYB5R3P00387 301 aaPredicted RBP4.21□□□□□ -1.73
CCDC39-204ENST00000476379 SEC11BP0C7V7 166 aa4.21□□□□□ -1.73
CCDC39-204ENST00000476379 BCL2P10415 239 aa4.21□□□□□ -1.73
CCDC39-204ENST00000476379 AMTP48728 403 aa4.21□□□□□ -1.73
CCDC39-204ENST00000476379 FOXA3P55318 350 aaPredicted RBP4.21□□□□□ -1.73
CCDC39-204ENST00000476379 UCP3P55916 312 aa4.21□□□□□ -1.73
CCDC39-204ENST00000476379 SCAND1P57086 179 aa4.21□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms