RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 OR9G9P0C7N8 305 aa3.38□□□□□ -1.87
USP16-205ENST00000474835 SRFP11831 508 aa3.38□□□□□ -1.87
USP16-205ENST00000474835 PGCP20142 388 aa3.38□□□□□ -1.87
USP16-205ENST00000474835 GATA2P23769 480 aaPredicted RBP3.38□□□□□ -1.87
USP16-205ENST00000474835 DUTP33316 252 aaKnown RBP3.38□□□□□ -1.87
USP16-205ENST00000474835 B3GALT5-AS1P59052 145 aa3.38□□□□□ -1.87
USP16-205ENST00000474835 PSG9Q00887 426 aa3.38□□□□□ -1.87
USP16-205ENST00000474835 SP6Q3SY56 376 aa3.38□□□□□ -1.87
USP16-205ENST00000474835 BRICD5Q6PL45 260 aa3.38□□□□□ -1.87
USP16-205ENST00000474835 FIGLAQ6QHK4 219 aa3.38□□□□□ -1.87
USP16-205ENST00000474835 H1FNTQ75WM6 255 aaPredicted RBP3.38□□□□□ -1.87
USP16-205ENST00000474835 MTSS1LQ765P7 747 aa3.38□□□□□ -1.87
USP16-205ENST00000474835 SLC22A18ASQ8N1D0 253 aa3.38□□□□□ -1.87
USP16-205ENST00000474835 ZNF439Q8NDP4 499 aa3.38□□□□□ -1.87
USP16-205ENST00000474835 OR5T1Q8NG75 326 aa3.38□□□□□ -1.87
USP16-205ENST00000474835 OCC1Q8TAD7 63 aa3.38□□□□□ -1.87
USP16-205ENST00000474835 APH1AQ96BI3 265 aa3.38□□□□□ -1.87
USP16-205ENST00000474835 THOC3Q96J01 351 aaKnown RBP3.38□□□□□ -1.87
USP16-205ENST00000474835 CDX2Q99626 313 aaPredicted RBP3.38□□□□□ -1.87
USP16-205ENST00000474835 KXD1Q9BQD3 176 aa3.38□□□□□ -1.87
USP16-205ENST00000474835 MRPL18Q9H0U6 180 aaKnown RBP3.38□□□□□ -1.87
USP16-205ENST00000474835 MS4A6AQ9H2W1 248 aa3.38□□□□□ -1.87
USP16-205ENST00000474835 CDIP1Q9H305 208 aa3.38□□□□□ -1.87
USP16-205ENST00000474835 LSM5Q9Y4Y9 91 aaKnown RBP3.38□□□□□ -1.87
USP16-205ENST00000474835 PSG1P11464 419 aa3.38□□□□□ -1.87
USP16-205ENST00000474835 ESPL1Q14674 2120 aa3.38□□□□□ -1.87
USP16-205ENST00000474835 CFAP161Q6P656 301 aa3.38□□□□□ -1.87
USP16-205ENST00000474835 PET117Q6UWS5 81 aa3.38□□□□□ -1.87
USP16-205ENST00000474835 SDIM1Q6ZPB5 146 aa3.38□□□□□ -1.87
USP16-205ENST00000474835 C2orf73Q8N5S3 287 aaPredicted RBP3.38□□□□□ -1.87
USP16-205ENST00000474835 FER1L6-AS1Q8NA97 138 aa3.38□□□□□ -1.87
USP16-205ENST00000474835 OR6C1Q96RD1 312 aa3.38□□□□□ -1.87
USP16-205ENST00000474835 GPER1Q99527 375 aa3.38□□□□□ -1.87
USP16-205ENST00000474835 HSPB9Q9BQS6 159 aa3.38□□□□□ -1.87
USP16-205ENST00000474835 ULBP2Q9BZM5 246 aa3.38□□□□□ -1.87
USP16-205ENST00000474835 PNO1Q9NRX1 252 aaKnown RBP3.38□□□□□ -1.87
USP16-205ENST00000474835 TNFRSF19Q9NS68 423 aa3.38□□□□□ -1.87
USP16-205ENST00000474835 DEPPQ9NTK1 212 aa3.38□□□□□ -1.87
USP16-205ENST00000474835 CCL15-CCL14A0A0B4J2E2 113 aa3.38□□□□□ -1.87
USP16-205ENST00000474835 TRGV8A0A0C4DH27 118 aa3.38□□□□□ -1.87
USP16-205ENST00000474835 A0A1W2PQF6 199 aa3.38□□□□□ -1.87
USP16-205ENST00000474835 C7orf71A4D174 169 aa3.38□□□□□ -1.87
USP16-205ENST00000474835 PROP1O75360 226 aa3.38□□□□□ -1.87
USP16-205ENST00000474835 CYC1P08574 325 aa3.38□□□□□ -1.87
USP16-205ENST00000474835 H2BFMP0C1H6 154 aa3.38□□□□□ -1.87
USP16-205ENST00000474835 NHLRC4P0CG21 123 aaPredicted RBP3.38□□□□□ -1.87
USP16-205ENST00000474835 COX8AP10176 69 aa3.38□□□□□ -1.87
USP16-205ENST00000474835 PSG2P11465 335 aa3.38□□□□□ -1.87
USP16-205ENST00000474835 CA6P23280 308 aa3.38□□□□□ -1.87
USP16-205ENST00000474835 FASLGP48023 281 aa3.38□□□□□ -1.87
USP16-205ENST00000474835 S100A10P60903 97 aa3.38□□□□□ -1.87
USP16-205ENST00000474835 NFATC4Q14934 902 aa3.38□□□□□ -1.87
USP16-205ENST00000474835 CCL15Q16663 113 aa3.38□□□□□ -1.87
USP16-205ENST00000474835 SMIM15Q7Z3B0 74 aa3.38□□□□□ -1.87
USP16-205ENST00000474835 CHST4Q8NCG5 386 aa3.38□□□□□ -1.87
USP16-205ENST00000474835 ZNF414Q96IQ9 312 aa3.38□□□□□ -1.87
USP16-205ENST00000474835 FAM167A-AS1Q96KT0 104 aa3.38□□□□□ -1.87
USP16-205ENST00000474835 SPIN2AQ99865 258 aa3.38□□□□□ -1.87
USP16-205ENST00000474835 SPIN2BQ9BPZ2 258 aa3.38□□□□□ -1.87
USP16-205ENST00000474835 CRISPLD2Q9H0B8 497 aa3.38□□□□□ -1.87
USP16-205ENST00000474835 LINC00574Q9H8X3 128 aa3.38□□□□□ -1.87
USP16-205ENST00000474835 CD207Q9UJ71 328 aa3.38□□□□□ -1.87
USP16-205ENST00000474835 LSM7Q9UK45 103 aaKnown RBP3.38□□□□□ -1.87
USP16-205ENST00000474835 C9orf118A6NHY6 69 aa3.37□□□□□ -1.87
USP16-205ENST00000474835 F2RL2O00254 374 aa3.37□□□□□ -1.87
USP16-205ENST00000474835 IGFBP2P18065 325 aa3.37□□□□□ -1.87
USP16-205ENST00000474835 SSTR5P35346 364 aa3.37□□□□□ -1.87
USP16-205ENST00000474835 RRADP55042 308 aa3.37□□□□□ -1.87
USP16-205ENST00000474835 SLAQ13239 276 aa3.37□□□□□ -1.87
USP16-205ENST00000474835 DEFB134Q4QY38 66 aa3.37□□□□□ -1.87
USP16-205ENST00000474835 CT83Q5H943 113 aa3.37□□□□□ -1.87
USP16-205ENST00000474835 FAM27BQ5VT28 67 aa3.37□□□□□ -1.87
USP16-205ENST00000474835 ZNF497Q6ZNH5 498 aa3.37□□□□□ -1.87
USP16-205ENST00000474835 OR2Z1Q8NG97 314 aa3.37□□□□□ -1.87
USP16-205ENST00000474835 CCDC3Q9BQI4 270 aa3.37□□□□□ -1.87
USP16-205ENST00000474835 VAMP8Q9BV40 100 aa3.37□□□□□ -1.87
USP16-205ENST00000474835 PRDM14Q9GZV8 571 aa3.37□□□□□ -1.87
USP16-205ENST00000474835 OR2W1Q9Y3N9 320 aa3.37□□□□□ -1.87
USP16-205ENST00000474835 A0A1W2PR80 420 aa3.37□□□□□ -1.87
USP16-205ENST00000474835 SYNDIG1LA6NDD5 238 aa3.37□□□□□ -1.87
USP16-205ENST00000474835 C15orf65H3BRN8 121 aa3.37□□□□□ -1.87
USP16-205ENST00000474835 J3QW42 95 aa3.37□□□□□ -1.87
USP16-205ENST00000474835 SAP30O75446 220 aa3.37□□□□□ -1.87
USP16-205ENST00000474835 HLA-DQA2P01906 255 aa3.37□□□□□ -1.87
USP16-205ENST00000474835 FGF12P61328 243 aa3.37□□□□□ -1.87
USP16-205ENST00000474835 MRGPRG-AS1Q2M3A8 158 aa3.37□□□□□ -1.87
USP16-205ENST00000474835 LHFPL2Q6ZUX7 228 aa3.37□□□□□ -1.87
USP16-205ENST00000474835 ATP5L2Q7Z4Y8 100 aa3.37□□□□□ -1.87
USP16-205ENST00000474835 TCTEX1D1Q8N7M0 179 aa3.37□□□□□ -1.87
USP16-205ENST00000474835 PSMF1Q92530 271 aa3.37□□□□□ -1.87
USP16-205ENST00000474835 NAT6Q93015 286 aa3.37□□□□□ -1.87
USP16-205ENST00000474835 CITED1Q99966 193 aa3.37□□□□□ -1.87
USP16-205ENST00000474835 DUSP23Q9BVJ7 150 aa3.37□□□□□ -1.87
USP16-205ENST00000474835 WNT10AQ9GZT5 417 aa3.37□□□□□ -1.87
USP16-205ENST00000474835 ZNF552Q9H707 407 aaPredicted RBP3.37□□□□□ -1.87
USP16-205ENST00000474835 SPANXB1Q9NS25 103 aaPredicted RBP3.37□□□□□ -1.87
USP16-205ENST00000474835 SLC35D1Q9NTN3 355 aa3.37□□□□□ -1.87
USP16-205ENST00000474835 HIGD1BQ9P298 99 aa3.37□□□□□ -1.87
USP16-205ENST00000474835 GNG13Q9P2W3 67 aa3.37□□□□□ -1.87
USP16-205ENST00000474835 TRAPPC1Q9Y5R8 145 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms