RNA–Protein interactions for RNA: ENST00000471697.1

SCN3A-207, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-207ENST00000471697 TTRP02766 147 aa2.56□□□□□ -2
SCN3A-207ENST00000471697 MAS1P04201 325 aa2.56□□□□□ -2
SCN3A-207ENST00000471697 PFN1P07737 140 aaKnown RBP2.56□□□□□ -2
SCN3A-207ENST00000471697 ERGP11308 486 aa2.56□□□□□ -2
SCN3A-207ENST00000471697 IGLL1P15814 213 aa2.56□□□□□ -2
SCN3A-207ENST00000471697 CXCL3P19876 107 aa2.56□□□□□ -2
SCN3A-207ENST00000471697 MARCKSL1P49006 195 aa2.56□□□□□ -2
SCN3A-207ENST00000471697 H2BFSP57053 126 aa2.56□□□□□ -2
SCN3A-207ENST00000471697 S100A10P60903 97 aa2.56□□□□□ -2
SCN3A-207ENST00000471697 RPS23P62266 143 aaKnown RBP2.56□□□□□ -2
SCN3A-207ENST00000471697 SRPXP78539 464 aa2.56□□□□□ -2
SCN3A-207ENST00000471697 MEF2BQ02080 365 aaPredicted RBP2.56□□□□□ -2
SCN3A-207ENST00000471697 BATFQ16520 125 aa2.56□□□□□ -2
SCN3A-207ENST00000471697 CCL15Q16663 113 aa2.56□□□□□ -2
SCN3A-207ENST00000471697 ZNF718Q3SXZ3 478 aa2.56□□□□□ -2
SCN3A-207ENST00000471697 PRR30Q53SZ7 412 aaPredicted RBP2.56□□□□□ -2
SCN3A-207ENST00000471697 LRRC10Q5BKY1 277 aa2.56□□□□□ -2
SCN3A-207ENST00000471697 TCEAL5Q5H9L2 206 aa2.56□□□□□ -2
SCN3A-207ENST00000471697 COA6Q5JTJ3 125 aaKnown RBP2.56□□□□□ -2
SCN3A-207ENST00000471697 FBXL22Q6P050 247 aa2.56□□□□□ -2
SCN3A-207ENST00000471697 IL34Q6ZMJ4 242 aa2.56□□□□□ -2
SCN3A-207ENST00000471697 ZNF705AQ6ZN79 300 aaPredicted RBP2.56□□□□□ -2
SCN3A-207ENST00000471697 Q6ZSR6 202 aa2.56□□□□□ -2
SCN3A-207ENST00000471697 KRTAP5-2Q701N4 177 aa2.56□□□□□ -2
SCN3A-207ENST00000471697 ZNF550Q7Z398 422 aa2.56□□□□□ -2
SCN3A-207ENST00000471697 SLC35E3Q7Z769 313 aa2.56□□□□□ -2
SCN3A-207ENST00000471697 GKN2Q86XP6 184 aa2.56□□□□□ -2
SCN3A-207ENST00000471697 CDC20BQ86Y33 519 aa2.56□□□□□ -2
SCN3A-207ENST00000471697 ZNF567Q8N184 647 aa2.56□□□□□ -2
SCN3A-207ENST00000471697 SLC22A18ASQ8N1D0 253 aa2.56□□□□□ -2
SCN3A-207ENST00000471697 HIST3H2BBQ8N257 126 aa2.56□□□□□ -2
SCN3A-207ENST00000471697 OR11H6Q8NGC7 330 aa2.56□□□□□ -2
SCN3A-207ENST00000471697 OR51A2Q8NGJ7 313 aa2.56□□□□□ -2
SCN3A-207ENST00000471697 OR1N2Q8NGR9 330 aa2.56□□□□□ -2
SCN3A-207ENST00000471697 OR1L1Q8NH94 360 aa2.56□□□□□ -2
SCN3A-207ENST00000471697 PRSS3P2Q8NHM4 247 aa2.56□□□□□ -2
SCN3A-207ENST00000471697 PPTC7Q8NI37 304 aa2.56□□□□□ -2
SCN3A-207ENST00000471697 ZNF519Q8TB69 540 aa2.56□□□□□ -2
SCN3A-207ENST00000471697 SECTM1Q8WVN6 248 aa2.56□□□□□ -2
SCN3A-207ENST00000471697 C10orf82Q8WW14 230 aa2.56□□□□□ -2
SCN3A-207ENST00000471697 PLEKHB2Q96CS7 222 aa2.56□□□□□ -2
SCN3A-207ENST00000471697 ACY3Q96HD9 319 aa2.56□□□□□ -2
SCN3A-207ENST00000471697 FMC1Q96HJ9 113 aa2.56□□□□□ -2
SCN3A-207ENST00000471697 BMFQ96LC9 184 aa2.56□□□□□ -2
SCN3A-207ENST00000471697 DERL3Q96Q80 235 aa2.56□□□□□ -2
SCN3A-207ENST00000471697 RTBDNQ9BSG5 229 aaPredicted RBP2.56□□□□□ -2
SCN3A-207ENST00000471697 ULBP3Q9BZM4 244 aa2.56□□□□□ -2
SCN3A-207ENST00000471697 SLIRPQ9GZT3 109 aaKnown RBP2.56□□□□□ -2
SCN3A-207ENST00000471697 LPAR5Q9H1C0 372 aa2.56□□□□□ -2
SCN3A-207ENST00000471697 OR2D2Q9H210 308 aa2.56□□□□□ -2
SCN3A-207ENST00000471697 ZNF71Q9NQZ8 489 aaPredicted RBP2.56□□□□□ -2
SCN3A-207ENST00000471697 HEBP1Q9NRV9 189 aa2.56□□□□□ -2
SCN3A-207ENST00000471697 ZNF586Q9NXT0 402 aa2.56□□□□□ -2
SCN3A-207ENST00000471697 CLCF1Q9UBD9 225 aa2.56□□□□□ -2
SCN3A-207ENST00000471697 MTFP1Q9UDX5 166 aa2.56□□□□□ -2
SCN3A-207ENST00000471697 ZFYVE16Q7Z3T8 1539 aa2.56□□□□□ -2
SCN3A-207ENST00000471697 SUPT6HQ7KZ85 1726 aaKnown RBP2.56□□□□□ -2
SCN3A-207ENST00000471697 ADAMTSL1Q8N6G6 1762 aa2.56□□□□□ -2
SCN3A-207ENST00000471697 TSPOAP1O95153 1857 aa2.56□□□□□ -2
SCN3A-207ENST00000471697 IGHV4-4A0A075B6R2 117 aa2.55□□□□□ -2
SCN3A-207ENST00000471697 IGHV3OR16-13A0A075B7E8 117 aa2.55□□□□□ -2
SCN3A-207ENST00000471697 A0A1W2PRS3 328 aa2.55□□□□□ -2
SCN3A-207ENST00000471697 FOXI3A8MTJ6 420 aaPredicted RBP2.55□□□□□ -2
SCN3A-207ENST00000471697 C8orf87E5RJ46 101 aa2.55□□□□□ -2
SCN3A-207ENST00000471697 SAP18O00422 153 aaKnown RBP2.55□□□□□ -2
SCN3A-207ENST00000471697 TRAF3IP2O43734 574 aaPredicted RBP2.55□□□□□ -2
SCN3A-207ENST00000471697 PDCD6O75340 191 aa2.55□□□□□ -2
SCN3A-207ENST00000471697 ATP10BO94823 1461 aa2.55□□□□□ -2
SCN3A-207ENST00000471697 YIF1AO95070 293 aa2.55□□□□□ -2
SCN3A-207ENST00000471697 MPC2O95563 127 aa2.55□□□□□ -2
SCN3A-207ENST00000471697 OR2H2O95918 312 aa2.55□□□□□ -2
SCN3A-207ENST00000471697 REG1AP05451 166 aa2.55□□□□□ -2
SCN3A-207ENST00000471697 GPX1P07203 203 aa2.55□□□□□ -2
SCN3A-207ENST00000471697 LINC00032P0C843 101 aa2.55□□□□□ -2
SCN3A-207ENST00000471697 OR12D1P0DN82 309 aa2.55□□□□□ -2
SCN3A-207ENST00000471697 SPNP16150 400 aa2.55□□□□□ -2
SCN3A-207ENST00000471697 CXCL2P19875 107 aa2.55□□□□□ -2
SCN3A-207ENST00000471697 PZPP20742 1482 aa2.55□□□□□ -2
SCN3A-207ENST00000471697 IGHV1-2P23083 117 aa2.55□□□□□ -2
SCN3A-207ENST00000471697 NFYBP25208 207 aa2.55□□□□□ -2
SCN3A-207ENST00000471697 CNTFRP26992 372 aa2.55□□□□□ -2
SCN3A-207ENST00000471697 SRIP30626 198 aa2.55□□□□□ -2
SCN3A-207ENST00000471697 BTCP35070 178 aa2.55□□□□□ -2
SCN3A-207ENST00000471697 SCN1AP35498 2009 aa2.55□□□□□ -2
SCN3A-207ENST00000471697 GLRXP35754 106 aa2.55□□□□□ -2
SCN3A-207ENST00000471697 GUCA1AP43080 201 aaPredicted RBP2.55□□□□□ -2
SCN3A-207ENST00000471697 BLMP54132 1417 aaPredicted RBP2.55□□□□□ -2
SCN3A-207ENST00000471697 SNRPD2P62316 118 aaKnown RBP2.55□□□□□ -2
SCN3A-207ENST00000471697 CACNG7P62955 275 aa2.55□□□□□ -2
SCN3A-207ENST00000471697 UBA52P62987 128 aaKnown RBP2.55□□□□□ -2
SCN3A-207ENST00000471697 GRB2P62993 217 aaKnown RBP2.55□□□□□ -2
SCN3A-207ENST00000471697 RPS21P63220 83 aaKnown RBP2.55□□□□□ -2
SCN3A-207ENST00000471697 MYL5Q02045 173 aa2.55□□□□□ -2
SCN3A-207ENST00000471697 IQGAP2Q13576 1575 aa2.55□□□□□ -2
SCN3A-207ENST00000471697 SIX1Q15475 284 aaPredicted RBP2.55□□□□□ -2
SCN3A-207ENST00000471697 CCDC88AQ3V6T2 1871 aa2.55□□□□□ -2
SCN3A-207ENST00000471697 LGALSLQ3ZCW2 172 aaPredicted RBP2.55□□□□□ -2
SCN3A-207ENST00000471697 RPRD2Q5VT52 1461 aaKnown RBP2.55□□□□□ -2
SCN3A-207ENST00000471697 NXNL2Q5VZ03 156 aa2.55□□□□□ -2
SCN3A-207ENST00000471697 MORN5Q5VZ52 161 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms