RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 IGHV3-48P01763 117 aa5.96□□□□□ -1.46
BRCA1-210ENST00000471181 TRGV3P03979 118 aa5.96□□□□□ -1.46
BRCA1-210ENST00000471181 HOXD3P31249 432 aaPredicted RBP5.96□□□□□ -1.46
BRCA1-210ENST00000471181 ATP5J2P56134 94 aa5.96□□□□□ -1.46
BRCA1-210ENST00000471181 SIGLEC14Q08ET2 396 aa5.96□□□□□ -1.46
BRCA1-210ENST00000471181 WDR82Q6UXN9 313 aa5.96□□□□□ -1.46
BRCA1-210ENST00000471181 C1orf162Q8NEQ5 155 aaPredicted RBP5.96□□□□□ -1.46
BRCA1-210ENST00000471181 LTBP1Q14766 1721 aa5.96□□□□□ -1.46
BRCA1-210ENST00000471181 FOXA3P55318 350 aaPredicted RBP5.96□□□□□ -1.46
BRCA1-210ENST00000471181 SHISA5Q8N114 240 aa5.96□□□□□ -1.46
BRCA1-210ENST00000471181 OR9G4Q8NGQ1 327 aa5.96□□□□□ -1.46
BRCA1-210ENST00000471181 SDHCQ99643 169 aaPredicted RBP5.96□□□□□ -1.46
BRCA1-210ENST00000471181 JPT2Q9H910 190 aa5.96□□□□□ -1.46
BRCA1-210ENST00000471181 LMO7DNF2Z398 122 aa5.95□□□□□ -1.46
BRCA1-210ENST00000471181 PEX7O00628 323 aa5.95□□□□□ -1.46
BRCA1-210ENST00000471181 PRR35P0CG20 571 aa5.95□□□□□ -1.46
BRCA1-210ENST00000471181 ZFP36L2P47974 494 aaKnown RBP5.95□□□□□ -1.46
BRCA1-210ENST00000471181 ZNF645Q8N7E2 425 aa5.95□□□□□ -1.46
BRCA1-210ENST00000471181 SPTY2D1-AS1A0A0U1RR47 76 aa5.95□□□□□ -1.46
BRCA1-210ENST00000471181 NPIPB4C9JG80 1138 aa5.95□□□□□ -1.46
BRCA1-210ENST00000471181 MOSP00540 346 aa5.95□□□□□ -1.46
BRCA1-210ENST00000471181 LEPP41159 167 aa5.95□□□□□ -1.46
BRCA1-210ENST00000471181 FGF14Q92915 247 aa5.95□□□□□ -1.46
BRCA1-210ENST00000471181 LEAP2Q969E1 77 aa5.95□□□□□ -1.46
BRCA1-210ENST00000471181 DNAJC4Q9NNZ3 241 aa5.95□□□□□ -1.46
BRCA1-210ENST00000471181 YAE1D1Q9NRH1 226 aa5.95□□□□□ -1.46
BRCA1-210ENST00000471181 CALYQ9NYX4 217 aa5.95□□□□□ -1.46
BRCA1-210ENST00000471181 MRM2Q9UI43 246 aaKnown RBP5.95□□□□□ -1.46
BRCA1-210ENST00000471181 BRCA1P38398 1863 aaKnown RBP5.95□□□□□ -1.46
BRCA1-210ENST00000471181 ZNF250P15622 560 aa5.95□□□□□ -1.46
BRCA1-210ENST00000471181 GPR183P32249 361 aa5.95□□□□□ -1.46
BRCA1-210ENST00000471181 C3orf36Q3SXR2 165 aa5.95□□□□□ -1.46
BRCA1-210ENST00000471181 JMJD8Q96S16 334 aa5.95□□□□□ -1.46
BRCA1-210ENST00000471181 FIZ1Q96SL8 496 aa5.95□□□□□ -1.46
BRCA1-210ENST00000471181 QTRT1Q9BXR0 403 aaKnown RBP5.95□□□□□ -1.46
BRCA1-210ENST00000471181 SDF2L1Q9HCN8 221 aa5.95□□□□□ -1.46
BRCA1-210ENST00000471181 TNFSF18Q9UNG2 199 aa5.95□□□□□ -1.46
BRCA1-210ENST00000471181 NPIPB8E9PQR5 432 aa5.95□□□□□ -1.46
BRCA1-210ENST00000471181 NPIPB9F8W1W9 429 aa5.95□□□□□ -1.46
BRCA1-210ENST00000471181 NPIPB7O75200 414 aa5.95□□□□□ -1.46
BRCA1-210ENST00000471181 MMD2Q8IY49 270 aa5.95□□□□□ -1.46
BRCA1-210ENST00000471181 RNF182Q8N6D2 247 aa5.95□□□□□ -1.46
BRCA1-210ENST00000471181 WDR34Q96EX3 536 aa5.95□□□□□ -1.46
BRCA1-210ENST00000471181 ZNF625Q96I27 306 aaPredicted RBP5.95□□□□□ -1.46
BRCA1-210ENST00000471181 LHX9Q9NQ69 397 aa5.95□□□□□ -1.46
BRCA1-210ENST00000471181 ELOVL5Q9NYP7 299 aa5.95□□□□□ -1.46
BRCA1-210ENST00000471181 TMEFF2Q9UIK5 374 aaPredicted RBP5.95□□□□□ -1.46
BRCA1-210ENST00000471181 COL1A1P02452 1464 aaPredicted RBP5.95□□□□□ -1.46
BRCA1-210ENST00000471181 STHQ8IWL8 128 aa5.95□□□□□ -1.46
BRCA1-210ENST00000471181 LRRC37AA6NMS7 1700 aa5.95□□□□□ -1.46
BRCA1-210ENST00000471181 ARAP2Q8WZ64 1704 aa5.94□□□□□ -1.46
BRCA1-210ENST00000471181 PPIAL4CA0A0B4J2A2 164 aa5.94□□□□□ -1.46
BRCA1-210ENST00000471181 ZNF98A6NK75 572 aa5.94□□□□□ -1.46
BRCA1-210ENST00000471181 PPIAL4GP0DN37 164 aa5.94□□□□□ -1.46
BRCA1-210ENST00000471181 AGAP20933 346 aa5.94□□□□□ -1.46
BRCA1-210ENST00000471181 ATXN8Q156A1 80 aa5.94□□□□□ -1.46
BRCA1-210ENST00000471181 ZNF818PQ6ZRF7 136 aa5.94□□□□□ -1.46
BRCA1-210ENST00000471181 IDI2-AS1Q9NZ38 188 aa5.94□□□□□ -1.46
BRCA1-210ENST00000471181 CISD1Q9NZ45 108 aaKnown RBP5.94□□□□□ -1.46
BRCA1-210ENST00000471181 TRGV4A0A0C4DH28 118 aa5.94□□□□□ -1.46
BRCA1-210ENST00000471181 DPRXA6NFQ7 191 aa5.94□□□□□ -1.46
BRCA1-210ENST00000471181 PGPEP1LA6NFU8 196 aa5.94□□□□□ -1.46
BRCA1-210ENST00000471181 PRTN3P24158 256 aa5.94□□□□□ -1.46
BRCA1-210ENST00000471181 VAX1Q5SQQ9 334 aa5.94□□□□□ -1.46
BRCA1-210ENST00000471181 INO80CQ6PI98 192 aaPredicted RBP5.94□□□□□ -1.46
BRCA1-210ENST00000471181 PRSS41Q7RTY9 318 aa5.94□□□□□ -1.46
BRCA1-210ENST00000471181 GCSAMQ8N6F7 178 aa5.94□□□□□ -1.46
BRCA1-210ENST00000471181 GLMPQ8WWB7 406 aa5.94□□□□□ -1.46
BRCA1-210ENST00000471181 NHP2Q9NX24 153 aaKnown RBP5.94□□□□□ -1.46
BRCA1-210ENST00000471181 LOC105371242A0A075B767 164 aa5.94□□□□□ -1.46
BRCA1-210ENST00000471181 KBTBD11-OT1A0A1B0GTJ5 212 aa5.94□□□□□ -1.46
BRCA1-210ENST00000471181 NPIPB11E5RHQ5 1161 aa5.94□□□□□ -1.46
BRCA1-210ENST00000471181 TNFRSF6BO95407 300 aa5.94□□□□□ -1.46
BRCA1-210ENST00000471181 LGALS1P09382 135 aaKnown RBP5.94□□□□□ -1.46
BRCA1-210ENST00000471181 SCAND1P57086 179 aa5.94□□□□□ -1.46
BRCA1-210ENST00000471181 TMEM196Q5HYL7 178 aa5.94□□□□□ -1.46
BRCA1-210ENST00000471181 ALKAL1Q6UXT8 129 aa5.94□□□□□ -1.46
BRCA1-210ENST00000471181 TMEM86BQ8N661 226 aa5.94□□□□□ -1.46
BRCA1-210ENST00000471181 CXCL3P19876 107 aa5.94□□□□□ -1.46
BRCA1-210ENST00000471181 TMPRSS3P57727 454 aa5.94□□□□□ -1.46
BRCA1-210ENST00000471181 RBMY1FQ15415 496 aaKnown RBP5.94□□□□□ -1.46
BRCA1-210ENST00000471181 OR11H7Q8NGC8 314 aa5.94□□□□□ -1.46
BRCA1-210ENST00000471181 ITLN1Q8WWA0 313 aa5.94□□□□□ -1.46
BRCA1-210ENST00000471181 CXCL16Q9H2A7 254 aa5.94□□□□□ -1.46
BRCA1-210ENST00000471181 ANAPC10Q9UM13 185 aa5.94□□□□□ -1.46
BRCA1-210ENST00000471181 ADARB2-AS1A8MUL3 147 aa5.93□□□□□ -1.46
BRCA1-210ENST00000471181 SLC17A3O00476 420 aa5.93□□□□□ -1.46
BRCA1-210ENST00000471181 C8orf88P0DMB2 117 aa5.93□□□□□ -1.46
BRCA1-210ENST00000471181 PDLIM4P50479 330 aa5.93□□□□□ -1.46
BRCA1-210ENST00000471181 LRTM2Q8N967 370 aa5.93□□□□□ -1.46
BRCA1-210ENST00000471181 TP53I13Q8NBR0 393 aaPredicted RBP5.93□□□□□ -1.46
BRCA1-210ENST00000471181 OR11H4Q8NGC9 324 aa5.93□□□□□ -1.46
BRCA1-210ENST00000471181 WDFY2Q96P53 400 aa5.93□□□□□ -1.46
BRCA1-210ENST00000471181 WDR54Q9H977 334 aa5.93□□□□□ -1.46
BRCA1-210ENST00000471181 IL20Q9NYY1 176 aa5.93□□□□□ -1.46
BRCA1-210ENST00000471181 H0YL77 283 aa5.93□□□□□ -1.46
BRCA1-210ENST00000471181 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.93□□□□□ -1.46
BRCA1-210ENST00000471181 GCM2O75603 506 aaPredicted RBP5.93□□□□□ -1.46
BRCA1-210ENST00000471181 CD28P10747 220 aa5.93□□□□□ -1.46
BRCA1-210ENST00000471181 ICAM4Q14773 271 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms