RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 PIPOXQ9P0Z9 390 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 LPAR3Q9UBY5 353 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 MGAT4AQ9UM21 535 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 PSG11Q9UQ72 335 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 ZANQ9Y493 2812 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 A0A087X0M5 115 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 A0A1B0GX30 115 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 NAP1L6A6NFF2 107 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 RNASEK-C17orf49H0YIS7 233 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 M0R1W7 72 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 MPPED1O15442 326 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 HSPA12AO43301 675 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 KCNAB3O43448 404 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 YPEL1O60688 119 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 DIRAS3O95661 229 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 PPYP01298 95 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 IGLV1-47P01700 117 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 RBP4P02753 201 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 CTRB1P17538 263 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 TBPP20226 339 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 AADACP22760 399 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 PRTN3P24158 256 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 ZBTB25P24278 435 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 OR3A3P47888 321 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 GNG10P50151 68 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 RBMS2Q15434 407 aaKnown RBP3.83□□□□□ -1.8
SF3B1-208ENST00000470268 CT45A1Q5HYN5 189 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 ZNF626Q68DY1 528 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 CTRB2Q6GPI1 263 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 FAHD2BQ6P2I3 314 aaPredicted RBP3.83□□□□□ -1.8
SF3B1-208ENST00000470268 ODF3L1Q8IXM7 274 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 PDZD9Q8IXQ8 264 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 KIR3DL3Q8N743 410 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 OR52M1Q8NGK5 317 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 OR10J5Q8NHC4 309 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 CT45A3Q8NHU0 189 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 MARCH1Q8TCQ1 289 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 PCNPQ8WW12 178 aaKnown RBP3.83□□□□□ -1.8
SF3B1-208ENST00000470268 FAHD2AQ96GK7 314 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 C5orf30Q96GV9 206 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 YPEL2Q96QA6 119 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 PCGF1Q9BSM1 259 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 SUCNR1Q9BXA5 334 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 TMEM133Q9H2Q1 129 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 SLA2Q9H6Q3 261 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 METTL8Q9H825 291 aaKnown RBP3.83□□□□□ -1.8
SF3B1-208ENST00000470268 COPZ2Q9P299 210 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 GNG12Q9UBI6 72 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 MGAT4CQ9UBM8 478 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 JPT1Q9UK76 154 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 HSPB11Q9Y547 144 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 KPTNQ9Y664 436 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 SESN1Q9Y6P5 492 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 CR1P17927 2039 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 IGHV3OR16-10A0A075B7F0 116 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 IGHV2-26A0A0B4J1V2 119 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 CENPVL3A0A0U1RRI6 287 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 A0A1W2PRD5 423 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 A0A1W2PRF3 423 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 A0A1W2PRM7 423 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 GOSR2O14653 212 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 NXPH3O95157 252 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 C1QBP02746 253 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 IFNA6P05013 189 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 IL6RP08887 468 aaPredicted RBP3.82□□□□□ -1.8
SF3B1-208ENST00000470268 CTXN2P0C2S0 81 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 OR4E1P0C645 316 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 OR8U9P0C7N5 309 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 AKR1C4P17516 323 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 COX7A1P24310 79 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 PAX6P26367 422 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 CD34P28906 385 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 LINC00205P59089 165 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 FXYD4P59646 89 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 TSPAN5P62079 268 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 PPP1R1AQ13522 171 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 DIAPH2-AS1Q14236 149 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 MEF2DQ14814 521 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 ACTBL2Q562R1 376 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 KLF17Q5JT82 389 aaPredicted RBP3.82□□□□□ -1.8
SF3B1-208ENST00000470268 BTNL3Q6UXE8 466 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 SPNS3Q6ZMD2 512 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 SLC25A48Q6ZT89 311 aaKnown RBP3.82□□□□□ -1.8
SF3B1-208ENST00000470268 TMEM17Q86X19 198 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 ABHD12Q8N2K0 398 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 C9orf62Q8N4C0 152 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 ARRDC1Q8N5I2 433 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 OR10A7Q8NGE5 316 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 OR4P4Q8NGL7 312 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 OR2T35Q8NGX2 323 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 OR8U1Q8NH10 309 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 TERB2Q8NHR7 220 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 DEDD2Q8WXF8 326 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 MOB3AQ96BX8 217 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 ABHD14BQ96IU4 210 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 ZNF436Q9C0F3 470 aaPredicted RBP3.82□□□□□ -1.8
SF3B1-208ENST00000470268 FXYD6Q9H0Q3 95 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 IFI27L2Q9H2X8 130 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 SLC2A8Q9NY64 477 aa3.82□□□□□ -1.8
SF3B1-208ENST00000470268 RNF150Q9ULK6 438 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms