RNA–Protein interactions for RNA: ENST00000468792.1

COL6A3-208, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 329 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-208ENST00000468792 IGHV3-43A0A0B4J1X8 118 aa6.27□□□□□ -1.41
COL6A3-208ENST00000468792 PMS2P5A8MQ11 134 aa6.27□□□□□ -1.41
COL6A3-208ENST00000468792 DEFB108AA8MXU0 73 aa6.27□□□□□ -1.41
COL6A3-208ENST00000468792 FAM157AC9JC47 383 aa6.27□□□□□ -1.41
COL6A3-208ENST00000468792 M0R1X1 148 aa6.27□□□□□ -1.41
COL6A3-208ENST00000468792 TMPRSS2O15393 492 aa6.27□□□□□ -1.41
COL6A3-208ENST00000468792 HBE1P02100 147 aa6.27□□□□□ -1.41
COL6A3-208ENST00000468792 IGHV3-43DP0DP04 118 aa6.27□□□□□ -1.41
COL6A3-208ENST00000468792 AGAP20933 346 aa6.27□□□□□ -1.41
COL6A3-208ENST00000468792 LOXP28300 417 aaPredicted RBP6.27□□□□□ -1.41
COL6A3-208ENST00000468792 G6PCP35575 357 aa6.27□□□□□ -1.41
COL6A3-208ENST00000468792 CAMLGP49069 296 aa6.27□□□□□ -1.41
COL6A3-208ENST00000468792 ZNF137PP52743 207 aa6.27□□□□□ -1.41
COL6A3-208ENST00000468792 RPL31P62899 125 aaKnown RBP6.27□□□□□ -1.41
COL6A3-208ENST00000468792 ADORA2A-AS1P86434 159 aa6.27□□□□□ -1.41
COL6A3-208ENST00000468792 TLE4Q04727 773 aa6.27□□□□□ -1.41
COL6A3-208ENST00000468792 ZNF816Q0VGE8 651 aaPredicted RBP6.27□□□□□ -1.41
COL6A3-208ENST00000468792 CLINT1Q14677 625 aa6.27□□□□□ -1.41
COL6A3-208ENST00000468792 ZNF672Q499Z4 452 aaPredicted RBP6.27□□□□□ -1.41
COL6A3-208ENST00000468792 LRRC10Q5BKY1 277 aa6.27□□□□□ -1.41
COL6A3-208ENST00000468792 FAM201AQ5SY85 155 aa6.27□□□□□ -1.41
COL6A3-208ENST00000468792 CLEC9AQ6UXN8 241 aa6.27□□□□□ -1.41
COL6A3-208ENST00000468792 ZNF833PQ6ZTB9 187 aa6.27□□□□□ -1.41
COL6A3-208ENST00000468792 ZNF525Q8N782 197 aa6.27□□□□□ -1.41
COL6A3-208ENST00000468792 FAM216BQ8N7L0 139 aa6.27□□□□□ -1.41
COL6A3-208ENST00000468792 HSD17B11Q8NBQ5 300 aa6.27□□□□□ -1.41
COL6A3-208ENST00000468792 SUN5Q8TC36 379 aa6.27□□□□□ -1.41
COL6A3-208ENST00000468792 SCGB1C1Q8TD33 95 aa6.27□□□□□ -1.41
COL6A3-208ENST00000468792 DTD1Q8TEA8 209 aa6.27□□□□□ -1.41
COL6A3-208ENST00000468792 RBMXL1Q96E39 390 aaKnown RBP6.27□□□□□ -1.41
COL6A3-208ENST00000468792 PBDC1Q9BVG4 233 aa6.27□□□□□ -1.41
COL6A3-208ENST00000468792 IGHV1-69-2A0A0G2JMI3 117 aa6.26□□□□□ -1.41
COL6A3-208ENST00000468792 NDUFB3O43676 98 aa6.26□□□□□ -1.41
COL6A3-208ENST00000468792 FCGR3BO75015 233 aa6.26□□□□□ -1.41
COL6A3-208ENST00000468792 SNAPINO95295 136 aa6.26□□□□□ -1.41
COL6A3-208ENST00000468792 HRASP01112 189 aa6.26□□□□□ -1.41
COL6A3-208ENST00000468792 MBP02144 154 aa6.26□□□□□ -1.41
COL6A3-208ENST00000468792 APOC3P02656 99 aa6.26□□□□□ -1.41
COL6A3-208ENST00000468792 RBP4P02753 201 aa6.26□□□□□ -1.41
COL6A3-208ENST00000468792 PRH1P02810 166 aa6.26□□□□□ -1.41
COL6A3-208ENST00000468792 ARG1P05089 322 aa6.26□□□□□ -1.41
COL6A3-208ENST00000468792 SELLP14151 372 aa6.26□□□□□ -1.41
COL6A3-208ENST00000468792 MDKP21741 143 aaPredicted RBP6.26□□□□□ -1.41
COL6A3-208ENST00000468792 RAB2AP61019 212 aa6.26□□□□□ -1.41
COL6A3-208ENST00000468792 ERVK-16P61578 105 aa6.26□□□□□ -1.41
COL6A3-208ENST00000468792 TFF3Q07654 80 aa6.26□□□□□ -1.41
COL6A3-208ENST00000468792 IZUMO4Q1ZYL8 232 aa6.26□□□□□ -1.41
COL6A3-208ENST00000468792 AKR1C8PQ5T2L2 129 aa6.26□□□□□ -1.41
COL6A3-208ENST00000468792 FAM53AQ6NSI3 398 aaPredicted RBP6.26□□□□□ -1.41
COL6A3-208ENST00000468792 BTNL3Q6UXE8 466 aa6.26□□□□□ -1.41
COL6A3-208ENST00000468792 HAPLN4Q86UW8 402 aa6.26□□□□□ -1.41
COL6A3-208ENST00000468792 DEFB108BQ8NET1 73 aa6.26□□□□□ -1.41
COL6A3-208ENST00000468792 MBD3L1Q8WWY6 194 aa6.26□□□□□ -1.41
COL6A3-208ENST00000468792 TNFRSF14Q92956 283 aa6.26□□□□□ -1.41
COL6A3-208ENST00000468792 ZNF714Q96N38 554 aa6.26□□□□□ -1.41
COL6A3-208ENST00000468792 WDR61Q9GZS3 305 aaKnown RBP6.26□□□□□ -1.41
COL6A3-208ENST00000468792 SH3BGRL3Q9H299 93 aa6.26□□□□□ -1.41
COL6A3-208ENST00000468792 DYNLRB1Q9NP97 96 aa6.26□□□□□ -1.41
COL6A3-208ENST00000468792 CISD1Q9NZ45 108 aaKnown RBP6.26□□□□□ -1.41
COL6A3-208ENST00000468792 KIAA1456Q9P272 454 aa6.26□□□□□ -1.41
COL6A3-208ENST00000468792 FOXA2Q9Y261 457 aaPredicted RBP6.26□□□□□ -1.41
COL6A3-208ENST00000468792 ZNF257Q9Y2Q1 563 aa6.26□□□□□ -1.41
COL6A3-208ENST00000468792 KPTNQ9Y664 436 aa6.26□□□□□ -1.41
COL6A3-208ENST00000468792 SAA2-SAA4A0A096LPE2 208 aa6.25□□□□□ -1.41
COL6A3-208ENST00000468792 FNDC10F2Z333 226 aa6.25□□□□□ -1.41
COL6A3-208ENST00000468792 F8W036 122 aa6.25□□□□□ -1.41
COL6A3-208ENST00000468792 INS-IGF2F8WCM5 200 aa6.25□□□□□ -1.41
COL6A3-208ENST00000468792 SLC31A2O15432 143 aa6.25□□□□□ -1.41
COL6A3-208ENST00000468792 MPDU1O75352 247 aa6.25□□□□□ -1.41
COL6A3-208ENST00000468792 H2AFB1P0C5Y9 115 aa6.25□□□□□ -1.41
COL6A3-208ENST00000468792 METTL15P1P0C7V9 234 aa6.25□□□□□ -1.41
COL6A3-208ENST00000468792 SAA2P0DJI9 122 aaPredicted RBP6.25□□□□□ -1.41
COL6A3-208ENST00000468792 IAPPP10997 89 aa6.25□□□□□ -1.41
COL6A3-208ENST00000468792 ADCYAP1P18509 176 aa6.25□□□□□ -1.41
COL6A3-208ENST00000468792 VDAC2P45880 294 aaPredicted RBP6.25□□□□□ -1.41
COL6A3-208ENST00000468792 DLX6P56179 175 aa6.25□□□□□ -1.41
COL6A3-208ENST00000468792 RELBQ01201 579 aa6.25□□□□□ -1.41
COL6A3-208ENST00000468792 SLC38A11Q08AI6 406 aa6.25□□□□□ -1.41
COL6A3-208ENST00000468792 ARL16Q0P5N6 197 aa6.25□□□□□ -1.41
COL6A3-208ENST00000468792 GUK1Q16774 197 aa6.25□□□□□ -1.41
COL6A3-208ENST00000468792 HFEQ30201 348 aa6.25□□□□□ -1.41
COL6A3-208ENST00000468792 TMEM155Q4W5P6 130 aa6.25□□□□□ -1.41
COL6A3-208ENST00000468792 SPANXN5Q5MJ07 72 aa6.25□□□□□ -1.41
COL6A3-208ENST00000468792 TMEM200BQ69YZ2 307 aa6.25□□□□□ -1.41
COL6A3-208ENST00000468792 SPSB3Q6PJ21 355 aa6.25□□□□□ -1.41
COL6A3-208ENST00000468792 DUX4L9Q6RFH8 374 aaPredicted RBP6.25□□□□□ -1.41
COL6A3-208ENST00000468792 UNQ6494/PRO21346Q6UXR6 183 aa6.25□□□□□ -1.41
COL6A3-208ENST00000468792 TMEM182Q6ZP80 229 aaPredicted RBP6.25□□□□□ -1.41
COL6A3-208ENST00000468792 MUC15Q8N387 334 aa6.25□□□□□ -1.41
COL6A3-208ENST00000468792 TMEM217Q8N7C4 229 aa6.25□□□□□ -1.41
COL6A3-208ENST00000468792 OR10P1Q8NGE3 313 aa6.25□□□□□ -1.41
COL6A3-208ENST00000468792 OR10G4Q8NGN3 311 aa6.25□□□□□ -1.41
COL6A3-208ENST00000468792 OR4A16Q8NH70 328 aa6.25□□□□□ -1.41
COL6A3-208ENST00000468792 OSR1Q8TAX0 266 aaPredicted RBP6.25□□□□□ -1.41
COL6A3-208ENST00000468792 CA5BP1Q8WTZ4 195 aa6.25□□□□□ -1.41
COL6A3-208ENST00000468792 CCL17Q92583 94 aa6.25□□□□□ -1.41
COL6A3-208ENST00000468792 TAF15Q92804 592 aaKnown RBP eCLIP6.25□□□□□ -1.41
COL6A3-208ENST00000468792 TMEM186Q96B77 213 aa6.25□□□□□ -1.41
COL6A3-208ENST00000468792 NARS2Q96I59 477 aaKnown RBP6.25□□□□□ -1.41
COL6A3-208ENST00000468792 OR4C12Q96R67 309 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms