RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 IGHV3-43DP0DP04 118 aa10.54□□□□□ -0.72
CLCNKA-204ENST00000464764 LHX2P50458 406 aa10.54□□□□□ -0.72
CLCNKA-204ENST00000464764 GFRA1P56159 465 aa10.54□□□□□ -0.72
CLCNKA-204ENST00000464764 CXorf67Q86X51 503 aaPredicted RBP10.54□□□□□ -0.72
CLCNKA-204ENST00000464764 SAP25Q8TEE9 199 aa10.54□□□□□ -0.72
CLCNKA-204ENST00000464764 PCED1AQ9H1Q7 454 aa10.54□□□□□ -0.72
CLCNKA-204ENST00000464764 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.54□□□□□ -0.72
CLCNKA-204ENST00000464764 TMEM106BQ9NUM4 274 aa10.54□□□□□ -0.72
CLCNKA-204ENST00000464764 SCO2A0A1W2PP80 73 aa10.54□□□□□ -0.72
CLCNKA-204ENST00000464764 MARCH11A6NNE9 402 aa10.54□□□□□ -0.72
CLCNKA-204ENST00000464764 DLEU1O43261 78 aa10.54□□□□□ -0.72
CLCNKA-204ENST00000464764 SERF1AO75920 110 aa10.54□□□□□ -0.72
CLCNKA-204ENST00000464764 DCAF10Q5QP82 559 aa10.54□□□□□ -0.72
CLCNKA-204ENST00000464764 OCC1Q8TAD7 63 aa10.54□□□□□ -0.72
CLCNKA-204ENST00000464764 IFI44Q8TCB0 444 aa10.54□□□□□ -0.72
CLCNKA-204ENST00000464764 LRP5LA4QPB2 252 aa10.54□□□□□ -0.72
CLCNKA-204ENST00000464764 NPIPB11E5RHQ5 1161 aa10.54□□□□□ -0.72
CLCNKA-204ENST00000464764 SPINK4O60575 86 aa10.54□□□□□ -0.72
CLCNKA-204ENST00000464764 YPEL1O60688 119 aa10.54□□□□□ -0.72
CLCNKA-204ENST00000464764 SS18L1O75177 396 aaPredicted RBP10.54□□□□□ -0.72
CLCNKA-204ENST00000464764 SYNGR4O95473 234 aa10.54□□□□□ -0.72
CLCNKA-204ENST00000464764 TPTE2P1Q5T6R2 138 aa10.54□□□□□ -0.72
CLCNKA-204ENST00000464764 SCCPDHQ8NBX0 429 aa10.54□□□□□ -0.72
CLCNKA-204ENST00000464764 RFESDQ8TAC1 157 aa10.54□□□□□ -0.72
CLCNKA-204ENST00000464764 YPEL2Q96QA6 119 aa10.54□□□□□ -0.72
CLCNKA-204ENST00000464764 RRHO14718 337 aa10.53□□□□□ -0.72
CLCNKA-204ENST00000464764 GRPP07492 148 aa10.53□□□□□ -0.72
CLCNKA-204ENST00000464764 TNFSF10P50591 281 aa10.53□□□□□ -0.72
CLCNKA-204ENST00000464764 FAM103A1Q9BTL3 118 aaKnown RBP10.53□□□□□ -0.72
CLCNKA-204ENST00000464764 C12orf49Q9H741 205 aa10.53□□□□□ -0.72
CLCNKA-204ENST00000464764 DCAF16Q9NXF7 216 aa10.53□□□□□ -0.72
CLCNKA-204ENST00000464764 FAM166BA8MTA8 275 aa10.53□□□□□ -0.72
CLCNKA-204ENST00000464764 FAM90A26D6RGX4 464 aa10.53□□□□□ -0.72
CLCNKA-204ENST00000464764 RPLP1P05386 114 aaKnown RBP10.53□□□□□ -0.72
CLCNKA-204ENST00000464764 P0C879 139 aa10.53□□□□□ -0.72
CLCNKA-204ENST00000464764 KITLGP21583 273 aa10.53□□□□□ -0.72
CLCNKA-204ENST00000464764 AESQ08117 197 aa10.53□□□□□ -0.72
CLCNKA-204ENST00000464764 DMRTA1Q5VZB9 504 aa10.53□□□□□ -0.72
CLCNKA-204ENST00000464764 LINC00473A8K010 186 aa10.52□□□□□ -0.72
CLCNKA-204ENST00000464764 C12orf77C9JDV5 145 aa10.52□□□□□ -0.72
CLCNKA-204ENST00000464764 F6UZH7 168 aa10.52□□□□□ -0.72
CLCNKA-204ENST00000464764 WNT9BO14905 357 aa10.52□□□□□ -0.72
CLCNKA-204ENST00000464764 NXPH2O95156 264 aa10.52□□□□□ -0.72
CLCNKA-204ENST00000464764 ARL14EPLP0DKL9 152 aa10.52□□□□□ -0.72
CLCNKA-204ENST00000464764 FOLR3P41439 243 aa10.52□□□□□ -0.72
CLCNKA-204ENST00000464764 FOXL1Q12952 345 aa10.52□□□□□ -0.72
CLCNKA-204ENST00000464764 MSMO1Q15800 293 aa10.52□□□□□ -0.72
CLCNKA-204ENST00000464764 ATP6V1FQ16864 119 aa10.52□□□□□ -0.72
CLCNKA-204ENST00000464764 LTC4SQ16873 150 aa10.52□□□□□ -0.72
CLCNKA-204ENST00000464764 ARSJQ5FYB0 599 aaPredicted RBP10.52□□□□□ -0.72
CLCNKA-204ENST00000464764 LINC00596Q86U02 117 aa10.52□□□□□ -0.72
CLCNKA-204ENST00000464764 DUSP23Q9BVJ7 150 aa10.52□□□□□ -0.72
CLCNKA-204ENST00000464764 QTRT1Q9BXR0 403 aaKnown RBP10.52□□□□□ -0.72
CLCNKA-204ENST00000464764 RYDENQ9NUL5 291 aaKnown RBP10.52□□□□□ -0.72
CLCNKA-204ENST00000464764 TNRC6AQ8NDV7 1962 aaKnown RBP10.52□□□□□ -0.73
CLCNKA-204ENST00000464764 A0A1W2PPV4 95 aa10.52□□□□□ -0.73
CLCNKA-204ENST00000464764 C15orf62A8K5M9 175 aa10.52□□□□□ -0.73
CLCNKA-204ENST00000464764 AQP7O14520 342 aa10.52□□□□□ -0.73
CLCNKA-204ENST00000464764 ZNF826PQ6ZT77 177 aa10.52□□□□□ -0.73
CLCNKA-204ENST00000464764 R3HDM4Q96D70 268 aa10.52□□□□□ -0.73
CLCNKA-204ENST00000464764 MDFIC2A0A1B0GVS7 189 aa10.52□□□□□ -0.73
CLCNKA-204ENST00000464764 OR5B21A6NL26 309 aa10.52□□□□□ -0.73
CLCNKA-204ENST00000464764 J3QT63 122 aa10.52□□□□□ -0.73
CLCNKA-204ENST00000464764 IGHV3-13P01766 116 aa10.52□□□□□ -0.73
CLCNKA-204ENST00000464764 IGHV3-7P01780 117 aa10.52□□□□□ -0.73
CLCNKA-204ENST00000464764 SERPINA7P05543 415 aa10.52□□□□□ -0.73
CLCNKA-204ENST00000464764 CELA3BP08861 270 aa10.52□□□□□ -0.73
CLCNKA-204ENST00000464764 BRS3P32247 399 aa10.52□□□□□ -0.73
CLCNKA-204ENST00000464764 PCP4P48539 62 aa10.52□□□□□ -0.73
CLCNKA-204ENST00000464764 ZNF90Q03938 601 aa10.52□□□□□ -0.73
CLCNKA-204ENST00000464764 PLP2Q04941 152 aa10.52□□□□□ -0.73
CLCNKA-204ENST00000464764 IL11RAQ14626 422 aa10.52□□□□□ -0.73
CLCNKA-204ENST00000464764 MIC13Q5XKP0 118 aa10.52□□□□□ -0.73
CLCNKA-204ENST00000464764 H2BFWTQ7Z2G1 175 aa10.52□□□□□ -0.73
CLCNKA-204ENST00000464764 PPP1R32Q7Z5V6 425 aa10.52□□□□□ -0.73
CLCNKA-204ENST00000464764 VKORC1L1Q8N0U8 176 aa10.52□□□□□ -0.73
CLCNKA-204ENST00000464764 ZNF645Q8N7E2 425 aa10.52□□□□□ -0.73
CLCNKA-204ENST00000464764 LPAR2Q9HBW0 351 aa10.52□□□□□ -0.73
CLCNKA-204ENST00000464764 PSG7Q13046 419 aa10.51□□□□□ -0.73
CLCNKA-204ENST00000464764 OR5I1Q13606 314 aa10.51□□□□□ -0.73
CLCNKA-204ENST00000464764 KRTCAP3Q53RY4 240 aa10.51□□□□□ -0.73
CLCNKA-204ENST00000464764 Q6ZR03 302 aa10.51□□□□□ -0.73
CLCNKA-204ENST00000464764 MRGPRDQ8TDS7 321 aa10.51□□□□□ -0.73
CLCNKA-204ENST00000464764 TMEM45BQ96B21 275 aa10.51□□□□□ -0.73
CLCNKA-204ENST00000464764 FAM234AQ9H0X4 552 aa10.51□□□□□ -0.73
CLCNKA-204ENST00000464764 MBNL3Q9NUK0 354 aaKnown RBP10.51□□□□□ -0.73
CLCNKA-204ENST00000464764 MPC1Q9Y5U8 109 aa10.51□□□□□ -0.73
CLCNKA-204ENST00000464764 SPENQ96T58 3664 aaKnown RBP10.51□□□□□ -0.73
CLCNKA-204ENST00000464764 PIGBOS1A0A0B4J2F0 54 aa10.51□□□□□ -0.73
CLCNKA-204ENST00000464764 K7EN84 100 aa10.51□□□□□ -0.73
CLCNKA-204ENST00000464764 TMPRSS2O15393 492 aa10.51□□□□□ -0.73
CLCNKA-204ENST00000464764 PDE6DO43924 150 aa10.51□□□□□ -0.73
CLCNKA-204ENST00000464764 NEURL1O76050 574 aa10.51□□□□□ -0.73
CLCNKA-204ENST00000464764 CD1BP29016 333 aa10.51□□□□□ -0.73
CLCNKA-204ENST00000464764 IER3P46695 156 aa10.51□□□□□ -0.73
CLCNKA-204ENST00000464764 CYB561P49447 251 aa10.51□□□□□ -0.73
CLCNKA-204ENST00000464764 SLC35B1P78383 322 aa10.51□□□□□ -0.73
CLCNKA-204ENST00000464764 SSMEM1Q8WWF3 244 aa10.51□□□□□ -0.73
CLCNKA-204ENST00000464764 MIEN1Q9BRT3 115 aa10.51□□□□□ -0.73
CLCNKA-204ENST00000464764 DCTN5Q9BTE1 182 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms