RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 A0A0B4J293 547 aa17.18■□□□□ 0.34
C9orf3-208ENST00000451893 UCP3P55916 312 aa17.18■□□□□ 0.34
C9orf3-208ENST00000451893 RAB25P57735 213 aa17.18■□□□□ 0.34
C9orf3-208ENST00000451893 DIAPH2-AS1Q14236 149 aa17.18■□□□□ 0.34
C9orf3-208ENST00000451893 KPRPQ5T749 579 aaPredicted RBP17.18■□□□□ 0.34
C9orf3-208ENST00000451893 Q6ZPA2 131 aa17.18■□□□□ 0.34
C9orf3-208ENST00000451893 OR52M1Q8NGK5 317 aa17.18■□□□□ 0.34
C9orf3-208ENST00000451893 ZFAND1Q8TCF1 268 aa17.18■□□□□ 0.34
C9orf3-208ENST00000451893 GFOD1Q9NXC2 390 aa17.18■□□□□ 0.34
C9orf3-208ENST00000451893 GPR132Q9UNW8 380 aa17.18■□□□□ 0.34
C9orf3-208ENST00000451893 TGP01266 2768 aa17.18■□□□□ 0.34
C9orf3-208ENST00000451893 IGHV3-72A0A0B4J1Y9 119 aa17.17■□□□□ 0.34
C9orf3-208ENST00000451893 NUDT19A8MXV4 375 aa17.17■□□□□ 0.34
C9orf3-208ENST00000451893 FGF16O43320 207 aa17.17■□□□□ 0.34
C9orf3-208ENST00000451893 AADACL3Q5VUY0 350 aa17.17■□□□□ 0.34
C9orf3-208ENST00000451893 LPCAT3Q6P1A2 487 aa17.17■□□□□ 0.34
C9orf3-208ENST00000451893 SLC35E3Q7Z769 313 aa17.17■□□□□ 0.34
C9orf3-208ENST00000451893 SLC25A42Q86VD7 318 aa17.17■□□□□ 0.34
C9orf3-208ENST00000451893 ZNF2Q9BSG1 426 aaPredicted RBP17.17■□□□□ 0.34
C9orf3-208ENST00000451893 CABLES2Q9BTV7 478 aa17.17■□□□□ 0.34
C9orf3-208ENST00000451893 OR51J1Q9H342 316 aa17.17■□□□□ 0.34
C9orf3-208ENST00000451893 NOTCH3Q9UM47 2321 aa17.16■□□□□ 0.34
C9orf3-208ENST00000451893 IGHV1-3A0A0C4DH29 117 aa17.16■□□□□ 0.34
C9orf3-208ENST00000451893 FAM90A9PA6NNJ1 464 aa17.16■□□□□ 0.34
C9orf3-208ENST00000451893 AMY1AP04745 511 aa17.16■□□□□ 0.34
C9orf3-208ENST00000451893 IGLL1P15814 213 aa17.16■□□□□ 0.34
C9orf3-208ENST00000451893 ZNF816Q0VGE8 651 aaPredicted RBP17.16■□□□□ 0.34
C9orf3-208ENST00000451893 HMGN3Q15651 99 aa17.16■□□□□ 0.34
C9orf3-208ENST00000451893 C10orf99Q6UWK7 81 aa17.16■□□□□ 0.34
C9orf3-208ENST00000451893 ZNF329Q86UD4 541 aa17.16■□□□□ 0.34
C9orf3-208ENST00000451893 C5orf56Q8N8D9 126 aa17.16■□□□□ 0.34
C9orf3-208ENST00000451893 OR2T10Q8NGZ9 312 aa17.16■□□□□ 0.34
C9orf3-208ENST00000451893 TRBV6-7A0A0A0MS04 114 aa17.15■□□□□ 0.34
C9orf3-208ENST00000451893 CREBL2O60519 120 aaPredicted RBP17.15■□□□□ 0.34
C9orf3-208ENST00000451893 SCTP09683 121 aa17.15■□□□□ 0.34
C9orf3-208ENST00000451893 RCC1P18754 421 aaPredicted RBP17.15■□□□□ 0.34
C9orf3-208ENST00000451893 FCGR2CP31995 323 aa17.15■□□□□ 0.34
C9orf3-208ENST00000451893 RRAS2P62070 204 aaPredicted RBP17.15■□□□□ 0.34
C9orf3-208ENST00000451893 TMEM30BQ3MIR4 351 aa17.15■□□□□ 0.34
C9orf3-208ENST00000451893 OR10V1Q8NGI7 309 aa17.15■□□□□ 0.34
C9orf3-208ENST00000451893 OR10J5Q8NHC4 309 aa17.15■□□□□ 0.34
C9orf3-208ENST00000451893 MARCH1Q8TCQ1 289 aa17.15■□□□□ 0.34
C9orf3-208ENST00000451893 DPF1Q92782 380 aa17.15■□□□□ 0.34
C9orf3-208ENST00000451893 MRGPRFQ96AM1 343 aa17.15■□□□□ 0.34
C9orf3-208ENST00000451893 NEURL2Q9BR09 285 aa17.15■□□□□ 0.34
C9orf3-208ENST00000451893 MED28Q9H204 178 aa17.15■□□□□ 0.34
C9orf3-208ENST00000451893 VSIG4Q9Y279 399 aa17.15■□□□□ 0.34
C9orf3-208ENST00000451893 C15orf65H3BRN8 121 aa17.14■□□□□ 0.33
C9orf3-208ENST00000451893 ANXA7P20073 488 aaKnown RBP17.14■□□□□ 0.33
C9orf3-208ENST00000451893 HERV-K104P61576 105 aa17.14■□□□□ 0.33
C9orf3-208ENST00000451893 TCTEX1D4Q5JR98 221 aa17.14■□□□□ 0.33
C9orf3-208ENST00000451893 AKAP14Q86UN6 197 aa17.14■□□□□ 0.33
C9orf3-208ENST00000451893 TGIF2LXQ8IUE1 241 aa17.14■□□□□ 0.33
C9orf3-208ENST00000451893 MOB3AQ96BX8 217 aa17.14■□□□□ 0.33
C9orf3-208ENST00000451893 ZNF486Q96H40 463 aaPredicted RBP17.14■□□□□ 0.33
C9orf3-208ENST00000451893 RCC1LQ96I51 464 aaKnown RBP17.14■□□□□ 0.33
C9orf3-208ENST00000451893 NOL4LQ96MY1 436 aaPredicted RBP17.14■□□□□ 0.33
C9orf3-208ENST00000451893 RASL11BQ9BPW5 248 aa17.14■□□□□ 0.33
C9orf3-208ENST00000451893 TAF9BQ9HBM6 251 aa17.14■□□□□ 0.33
C9orf3-208ENST00000451893 LINC00527Q9UJ94 153 aa17.14■□□□□ 0.33
C9orf3-208ENST00000451893 C14orf166Q9Y224 244 aaKnown RBP17.14■□□□□ 0.33
C9orf3-208ENST00000451893 OR5H14A6NHG9 310 aa17.13■□□□□ 0.33
C9orf3-208ENST00000451893 TXNL1O43396 289 aa17.13■□□□□ 0.33
C9orf3-208ENST00000451893 TUSC2O75896 110 aa17.13■□□□□ 0.33
C9orf3-208ENST00000451893 DUS4LO95620 317 aaKnown RBP17.13■□□□□ 0.33
C9orf3-208ENST00000451893 CTSDP07339 412 aaPredicted RBP17.13■□□□□ 0.33
C9orf3-208ENST00000451893 OR4E1P0C645 316 aa17.13■□□□□ 0.33
C9orf3-208ENST00000451893 LOXL3P58215 753 aa17.13■□□□□ 0.33
C9orf3-208ENST00000451893 TMEM128Q5BJH2 165 aa17.13■□□□□ 0.33
C9orf3-208ENST00000451893 IGSF11Q5DX21 431 aa17.13■□□□□ 0.33
C9orf3-208ENST00000451893 TMED4Q7Z7H5 227 aa17.13■□□□□ 0.33
C9orf3-208ENST00000451893 SLC38A6Q8IZM9 456 aa17.13■□□□□ 0.33
C9orf3-208ENST00000451893 LINC00311Q8N616 119 aa17.13■□□□□ 0.33
C9orf3-208ENST00000451893 GALMQ96C23 342 aa17.13■□□□□ 0.33
C9orf3-208ENST00000451893 TOLLIPQ9H0E2 274 aa17.13■□□□□ 0.33
C9orf3-208ENST00000451893 AURKAIP1Q9NWT8 199 aaPredicted RBP17.13■□□□□ 0.33
C9orf3-208ENST00000451893 C12orf77C9JDV5 145 aa17.12■□□□□ 0.33
C9orf3-208ENST00000451893 HBZP02008 142 aa17.12■□□□□ 0.33
C9orf3-208ENST00000451893 PGAM2P15259 253 aa17.12■□□□□ 0.33
C9orf3-208ENST00000451893 DHODHQ02127 395 aa17.12■□□□□ 0.33
C9orf3-208ENST00000451893 Q3ZCU0 254 aa17.12■□□□□ 0.33
C9orf3-208ENST00000451893 C4orf46Q504U0 113 aa17.12■□□□□ 0.33
C9orf3-208ENST00000451893 COMMD1Q8N668 190 aa17.12■□□□□ 0.33
C9orf3-208ENST00000451893 C8orf31Q8N9H6 132 aa17.12■□□□□ 0.33
C9orf3-208ENST00000451893 ZNF431Q8TF32 576 aaPredicted RBP17.12■□□□□ 0.33
C9orf3-208ENST00000451893 RTN4IP1Q8WWV3 396 aaPredicted RBP17.12■□□□□ 0.33
C9orf3-208ENST00000451893 EAF1Q96JC9 268 aaPredicted RBP17.12■□□□□ 0.33
C9orf3-208ENST00000451893 GON7Q9BXV9 100 aa17.12■□□□□ 0.33
C9orf3-208ENST00000451893 GPR61Q9BZJ8 451 aa17.12■□□□□ 0.33
C9orf3-208ENST00000451893 IGKV1-6A0A0C4DH72 117 aa17.11■□□□□ 0.33
C9orf3-208ENST00000451893 BET1O15155 118 aa17.11■□□□□ 0.33
C9orf3-208ENST00000451893 SSNA1O43805 119 aa17.11■□□□□ 0.33
C9orf3-208ENST00000451893 MOSP00540 346 aa17.11■□□□□ 0.33
C9orf3-208ENST00000451893 PPYP01298 95 aa17.11■□□□□ 0.33
C9orf3-208ENST00000451893 ZBTB25P24278 435 aa17.11■□□□□ 0.33
C9orf3-208ENST00000451893 HTD2P86397 168 aa17.11■□□□□ 0.33
C9orf3-208ENST00000451893 CBX3Q13185 183 aa17.11■□□□□ 0.33
C9orf3-208ENST00000451893 H1FOOQ8IZA3 346 aaPredicted RBP17.11■□□□□ 0.33
C9orf3-208ENST00000451893 KLHL30-AS1Q8NEE0 82 aa17.11■□□□□ 0.33
C9orf3-208ENST00000451893 OR1L1Q8NH94 360 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms