RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 SFT2D2O95562 160 aa8.15□□□□□ -1.1
CCDC171-203ENST00000449575 CD37P11049 281 aa8.15□□□□□ -1.1
CCDC171-203ENST00000449575 SERPINA2P20848 420 aa8.15□□□□□ -1.1
CCDC171-203ENST00000449575 KHDC3LQ587J8 217 aa8.15□□□□□ -1.1
CCDC171-203ENST00000449575 GLIPR1L1Q6UWM5 242 aa8.15□□□□□ -1.1
CCDC171-203ENST00000449575 ASCL4Q6XD76 172 aa8.15□□□□□ -1.1
CCDC171-203ENST00000449575 ZNF788Q6ZQV5 615 aa8.15□□□□□ -1.1
CCDC171-203ENST00000449575 TRAPPC6BQ86SZ2 158 aa8.15□□□□□ -1.1
CCDC171-203ENST00000449575 FAM46BQ96A09 425 aa8.15□□□□□ -1.1
CCDC171-203ENST00000449575 BANF2Q9H503 90 aa8.15□□□□□ -1.1
CCDC171-203ENST00000449575 A8MWP6 167 aa8.15□□□□□ -1.11
CCDC171-203ENST00000449575 KIAA1324LA8MWY0 1029 aaPredicted RBP8.15□□□□□ -1.11
CCDC171-203ENST00000449575 DVL1O14640 695 aa8.15□□□□□ -1.11
CCDC171-203ENST00000449575 FSTL3O95633 263 aa8.15□□□□□ -1.11
CCDC171-203ENST00000449575 SEC11BP0C7V7 166 aa8.15□□□□□ -1.11
CCDC171-203ENST00000449575 SMIM21Q3B7S5 101 aa8.15□□□□□ -1.11
CCDC171-203ENST00000449575 SOHLH1Q5JUK2 328 aa8.15□□□□□ -1.11
CCDC171-203ENST00000449575 HOGA1Q86XE5 327 aa8.15□□□□□ -1.11
CCDC171-203ENST00000449575 OR4S1Q8NGB4 309 aa8.15□□□□□ -1.11
CCDC171-203ENST00000449575 METTL8Q9H825 291 aaKnown RBP8.15□□□□□ -1.11
CCDC171-203ENST00000449575 HIVEP2P31629 2446 aa8.14□□□□□ -1.11
CCDC171-203ENST00000449575 HIST1H2BKO60814 126 aa8.14□□□□□ -1.11
CCDC171-203ENST00000449575 LY6G6DO95868 133 aa8.14□□□□□ -1.11
CCDC171-203ENST00000449575 HIST1H2BJP06899 126 aa8.14□□□□□ -1.11
CCDC171-203ENST00000449575 HIST1H2BOP23527 126 aa8.14□□□□□ -1.11
CCDC171-203ENST00000449575 PRDX2P32119 198 aa8.14□□□□□ -1.11
CCDC171-203ENST00000449575 HIST1H2BBP33778 126 aa8.14□□□□□ -1.11
CCDC171-203ENST00000449575 CAMLGP49069 296 aa8.14□□□□□ -1.11
CCDC171-203ENST00000449575 HIST1H2BDP58876 126 aa8.14□□□□□ -1.11
CCDC171-203ENST00000449575 HIST1H2BCP62807 126 aa8.14□□□□□ -1.11
CCDC171-203ENST00000449575 TNFRSF9Q07011 255 aa8.14□□□□□ -1.11
CCDC171-203ENST00000449575 HIST2H2BEQ16778 126 aa8.14□□□□□ -1.11
CCDC171-203ENST00000449575 TM4SF20Q53R12 229 aa8.14□□□□□ -1.11
CCDC171-203ENST00000449575 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.14□□□□□ -1.11
CCDC171-203ENST00000449575 C1orf100Q5SVJ3 147 aa8.14□□□□□ -1.11
CCDC171-203ENST00000449575 RTN4RL2Q86UN3 420 aa8.14□□□□□ -1.11
CCDC171-203ENST00000449575 SAXO1Q8IYX7 474 aa8.14□□□□□ -1.11
CCDC171-203ENST00000449575 SUMF2Q8NBJ7 301 aa8.14□□□□□ -1.11
CCDC171-203ENST00000449575 HIST1H2BHQ93079 126 aa8.14□□□□□ -1.11
CCDC171-203ENST00000449575 MRGPRFQ96AM1 343 aa8.14□□□□□ -1.11
CCDC171-203ENST00000449575 R3HDM4Q96D70 268 aa8.14□□□□□ -1.11
CCDC171-203ENST00000449575 NEIL1Q96FI4 390 aaPredicted RBP8.14□□□□□ -1.11
CCDC171-203ENST00000449575 HIST1H2BNQ99877 126 aa8.14□□□□□ -1.11
CCDC171-203ENST00000449575 HIST1H2BMQ99879 126 aa8.14□□□□□ -1.11
CCDC171-203ENST00000449575 GPR61Q9BZJ8 451 aa8.14□□□□□ -1.11
CCDC171-203ENST00000449575 RAB22AQ9UL26 194 aa8.14□□□□□ -1.11
CCDC171-203ENST00000449575 BORCS7-ASMTA0A0B4J1R7 106 aa8.14□□□□□ -1.11
CCDC171-203ENST00000449575 TMEM235A6NFC5 223 aa8.14□□□□□ -1.11
CCDC171-203ENST00000449575 MARCH11A6NNE9 402 aa8.14□□□□□ -1.11
CCDC171-203ENST00000449575 K7EPK0 472 aa8.14□□□□□ -1.11
CCDC171-203ENST00000449575 LDLRAD4O15165 306 aa8.14□□□□□ -1.11
CCDC171-203ENST00000449575 PSPNO60542 156 aa8.14□□□□□ -1.11
CCDC171-203ENST00000449575 RPL12P30050 165 aaKnown RBP8.14□□□□□ -1.11
CCDC171-203ENST00000449575 COL10A1Q03692 680 aa8.14□□□□□ -1.11
CCDC171-203ENST00000449575 UNC119Q13432 240 aa8.14□□□□□ -1.11
CCDC171-203ENST00000449575 RAB32Q13637 225 aa8.14□□□□□ -1.11
CCDC171-203ENST00000449575 WDR25Q64LD2 544 aaPredicted RBP8.14□□□□□ -1.11
CCDC171-203ENST00000449575 FAM71E2Q8N5Q1 922 aa8.14□□□□□ -1.11
CCDC171-203ENST00000449575 PACRGQ96M98 296 aaPredicted RBP8.14□□□□□ -1.11
CCDC171-203ENST00000449575 SCRT1Q9BWW7 348 aa8.14□□□□□ -1.11
CCDC171-203ENST00000449575 SETD2Q9BYW2 2564 aaPredicted RBP8.13□□□□□ -1.11
CCDC171-203ENST00000449575 C22orf46C9J442 243 aa8.13□□□□□ -1.11
CCDC171-203ENST00000449575 SIRPB1O00241 398 aa8.13□□□□□ -1.11
CCDC171-203ENST00000449575 GEMIN2O14893 280 aaKnown RBP8.13□□□□□ -1.11
CCDC171-203ENST00000449575 HAND1O96004 215 aa8.13□□□□□ -1.11
CCDC171-203ENST00000449575 KNG1P01042 644 aa8.13□□□□□ -1.11
CCDC171-203ENST00000449575 TGFAP01135 160 aa8.13□□□□□ -1.11
CCDC171-203ENST00000449575 VSIG8P0DPA2 414 aa8.13□□□□□ -1.11
CCDC171-203ENST00000449575 FABP4P15090 132 aa8.13□□□□□ -1.11
CCDC171-203ENST00000449575 HRH1P35367 487 aa8.13□□□□□ -1.11
CCDC171-203ENST00000449575 FGF12P61328 243 aa8.13□□□□□ -1.11
CCDC171-203ENST00000449575 ZNF616Q08AN1 781 aa8.13□□□□□ -1.11
CCDC171-203ENST00000449575 JOSD1Q15040 202 aaPredicted RBP8.13□□□□□ -1.11
CCDC171-203ENST00000449575 ZNF146Q15072 292 aa8.13□□□□□ -1.11
CCDC171-203ENST00000449575 ZNF260Q3ZCT1 412 aa8.13□□□□□ -1.11
CCDC171-203ENST00000449575 Q6P435 159 aa8.13□□□□□ -1.11
CCDC171-203ENST00000449575 BRICD5Q6PL45 260 aa8.13□□□□□ -1.11
CCDC171-203ENST00000449575 SSBP3Q9BWW4 388 aaPredicted RBP8.13□□□□□ -1.11
CCDC171-203ENST00000449575 SUCNR1Q9BXA5 334 aa8.13□□□□□ -1.11
CCDC171-203ENST00000449575 PLEKHA2Q9HB19 425 aa8.13□□□□□ -1.11
CCDC171-203ENST00000449575 KAAG1Q9UBP8 84 aa8.13□□□□□ -1.11
CCDC171-203ENST00000449575 HSPB6O14558 160 aa8.13□□□□□ -1.11
CCDC171-203ENST00000449575 ZNF737O75373 536 aa8.13□□□□□ -1.11
CCDC171-203ENST00000449575 OR2H2O95918 312 aa8.13□□□□□ -1.11
CCDC171-203ENST00000449575 S100A10P60903 97 aa8.13□□□□□ -1.11
CCDC171-203ENST00000449575 GNB2P62879 340 aa8.13□□□□□ -1.11
CCDC171-203ENST00000449575 QRFPP83859 136 aa8.13□□□□□ -1.11
CCDC171-203ENST00000449575 GGNBP1Q5YKI7 109 aa8.13□□□□□ -1.11
CCDC171-203ENST00000449575 HSD17B11Q8NBQ5 300 aa8.13□□□□□ -1.11
CCDC171-203ENST00000449575 OR8B3Q8NGG8 313 aa8.13□□□□□ -1.11
CCDC171-203ENST00000449575 MARCH1Q8TCQ1 289 aa8.13□□□□□ -1.11
CCDC171-203ENST00000449575 RNASEH2CQ8TDP1 164 aaKnown RBP8.13□□□□□ -1.11
CCDC171-203ENST00000449575 RAB39BQ96DA2 213 aa8.13□□□□□ -1.11
CCDC171-203ENST00000449575 SDSLQ96GA7 329 aa8.13□□□□□ -1.11
CCDC171-203ENST00000449575 C1orf159Q96HA4 380 aa8.13□□□□□ -1.11
CCDC171-203ENST00000449575 OR8B2Q96RD0 313 aa8.13□□□□□ -1.11
CCDC171-203ENST00000449575 ARV1Q9H2C2 271 aa8.13□□□□□ -1.11
CCDC171-203ENST00000449575 CLN8Q9UBY8 286 aa8.13□□□□□ -1.11
CCDC171-203ENST00000449575 ST3GAL6Q9Y274 331 aa8.13□□□□□ -1.11
CCDC171-203ENST00000449575 FCGR2CP31995 323 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms