RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 FAM106CPP0CH98 169 aa11.75□□□□□ -0.53
SHANK2-210ENST00000449116 VSIG10L2P0DP72 767 aa11.75□□□□□ -0.53
SHANK2-210ENST00000449116 ANXA3P12429 323 aa11.75□□□□□ -0.53
SHANK2-210ENST00000449116 VAMP1P23763 118 aa11.75□□□□□ -0.53
SHANK2-210ENST00000449116 BRWD1-AS2P59051 145 aa11.75□□□□□ -0.53
SHANK2-210ENST00000449116 SUPT4H1P63272 117 aaKnown RBP11.75□□□□□ -0.53
SHANK2-210ENST00000449116 PPP1R1AQ13522 171 aa11.75□□□□□ -0.53
SHANK2-210ENST00000449116 EBI3Q14213 229 aa11.75□□□□□ -0.53
SHANK2-210ENST00000449116 C4orf46Q504U0 113 aa11.75□□□□□ -0.53
SHANK2-210ENST00000449116 DHRS7BQ6IAN0 325 aaPredicted RBP11.75□□□□□ -0.53
SHANK2-210ENST00000449116 SIGLECL1Q8N7X8 197 aa11.75□□□□□ -0.53
SHANK2-210ENST00000449116 OR4S2Q8NH73 311 aa11.75□□□□□ -0.53
SHANK2-210ENST00000449116 CHPT1Q8WUD6 406 aa11.75□□□□□ -0.53
SHANK2-210ENST00000449116 FLYWCH2Q96CP2 140 aaKnown RBP11.75□□□□□ -0.53
SHANK2-210ENST00000449116 TP53RKQ96S44 253 aa11.75□□□□□ -0.53
SHANK2-210ENST00000449116 BEX1Q9HBH7 125 aa11.75□□□□□ -0.53
SHANK2-210ENST00000449116 FAM212BQ9NTI7 297 aaPredicted RBP11.75□□□□□ -0.53
SHANK2-210ENST00000449116 H3BUX3 64 aa11.74□□□□□ -0.53
SHANK2-210ENST00000449116 SFT2D2O95562 160 aa11.74□□□□□ -0.53
SHANK2-210ENST00000449116 CRYZL1O95825 349 aa11.74□□□□□ -0.53
SHANK2-210ENST00000449116 HPRT1P00492 218 aa11.74□□□□□ -0.53
SHANK2-210ENST00000449116 MOSP00540 346 aa11.74□□□□□ -0.53
SHANK2-210ENST00000449116 IFNA2P01563 188 aa11.74□□□□□ -0.53
SHANK2-210ENST00000449116 HLA-AP01891 365 aaKnown RBP11.74□□□□□ -0.53
SHANK2-210ENST00000449116 IGKV1-16P04430 117 aa11.74□□□□□ -0.53
SHANK2-210ENST00000449116 CD24P25063 80 aa11.74□□□□□ -0.53
SHANK2-210ENST00000449116 UCP1P25874 307 aa11.74□□□□□ -0.53
SHANK2-210ENST00000449116 IER3P46695 156 aa11.74□□□□□ -0.53
SHANK2-210ENST00000449116 DHRS2Q13268 280 aa11.74□□□□□ -0.53
SHANK2-210ENST00000449116 HES1Q14469 280 aa11.74□□□□□ -0.53
SHANK2-210ENST00000449116 SP6Q3SY56 376 aa11.74□□□□□ -0.53
SHANK2-210ENST00000449116 TMEM177Q53S58 311 aa11.74□□□□□ -0.53
SHANK2-210ENST00000449116 RBMS3Q6XE24 437 aaKnown RBP11.74□□□□□ -0.53
SHANK2-210ENST00000449116 OR4C13Q8NGP0 309 aa11.74□□□□□ -0.53
SHANK2-210ENST00000449116 OR2T10Q8NGZ9 312 aa11.74□□□□□ -0.53
SHANK2-210ENST00000449116 OR5R1Q8NH85 324 aa11.74□□□□□ -0.53
SHANK2-210ENST00000449116 PIFOQ8TCI5 191 aa11.74□□□□□ -0.53
SHANK2-210ENST00000449116 TMEM222Q9H0R3 208 aa11.74□□□□□ -0.53
SHANK2-210ENST00000449116 ZFHX3Q15911 3703 aa11.74□□□□□ -0.53
SHANK2-210ENST00000449116 C9orf170A2RU37 121 aa11.73□□□□□ -0.53
SHANK2-210ENST00000449116 BTBD17A6NE02 478 aa11.73□□□□□ -0.53
SHANK2-210ENST00000449116 PRAF2O60831 178 aa11.73□□□□□ -0.53
SHANK2-210ENST00000449116 DHFRP00374 187 aa11.73□□□□□ -0.53
SHANK2-210ENST00000449116 IL5P05113 134 aa11.73□□□□□ -0.53
SHANK2-210ENST00000449116 SERPINE2P07093 398 aa11.73□□□□□ -0.53
SHANK2-210ENST00000449116 FAM157CP0CG43 387 aa11.73□□□□□ -0.53
SHANK2-210ENST00000449116 RPA2P15927 270 aa11.73□□□□□ -0.53
SHANK2-210ENST00000449116 TMEM11P17152 192 aa11.73□□□□□ -0.53
SHANK2-210ENST00000449116 MTORP42345 2549 aa11.73□□□□□ -0.53
SHANK2-210ENST00000449116 LPAR6P43657 344 aa11.73□□□□□ -0.53
SHANK2-210ENST00000449116 TMEM187Q14656 261 aa11.73□□□□□ -0.53
SHANK2-210ENST00000449116 SLC9A3R2Q15599 337 aa11.73□□□□□ -0.53
SHANK2-210ENST00000449116 ZNF585BQ52M93 769 aa11.73□□□□□ -0.53
SHANK2-210ENST00000449116 LYG2Q86SG7 212 aa11.73□□□□□ -0.53
SHANK2-210ENST00000449116 OSR1Q8TAX0 266 aaPredicted RBP11.73□□□□□ -0.53
SHANK2-210ENST00000449116 GLYATL2Q8WU03 294 aa11.73□□□□□ -0.53
SHANK2-210ENST00000449116 SSMEM1Q8WWF3 244 aa11.73□□□□□ -0.53
SHANK2-210ENST00000449116 RBMXL1Q96E39 390 aaKnown RBP11.73□□□□□ -0.53
SHANK2-210ENST00000449116 EAF1Q96JC9 268 aaPredicted RBP11.73□□□□□ -0.53
SHANK2-210ENST00000449116 RNF5Q99942 180 aa11.73□□□□□ -0.53
SHANK2-210ENST00000449116 PLEKHA2Q9HB19 425 aa11.73□□□□□ -0.53
SHANK2-210ENST00000449116 TCF19Q9Y242 345 aa11.73□□□□□ -0.53
SHANK2-210ENST00000449116 NSD1Q96L73 2696 aaPredicted RBP11.72□□□□□ -0.53
SHANK2-210ENST00000449116 SHOXO15266 292 aa11.72□□□□□ -0.53
SHANK2-210ENST00000449116 HOXA3O43365 443 aaPredicted RBP11.72□□□□□ -0.53
SHANK2-210ENST00000449116 S1PR2O95136 353 aa11.72□□□□□ -0.53
SHANK2-210ENST00000449116 IGHV4-59P01825 116 aa11.72□□□□□ -0.53
SHANK2-210ENST00000449116 LGALS7P47929 136 aa11.72□□□□□ -0.53
SHANK2-210ENST00000449116 RPS16P62249 146 aaKnown RBP11.72□□□□□ -0.53
SHANK2-210ENST00000449116 SRPXP78539 464 aa11.72□□□□□ -0.53
SHANK2-210ENST00000449116 FBLN7Q53RD9 439 aa11.72□□□□□ -0.53
SHANK2-210ENST00000449116 LIAT1Q6ZQX7 453 aa11.72□□□□□ -0.53
SHANK2-210ENST00000449116 TMEM86BQ8N661 226 aa11.72□□□□□ -0.53
SHANK2-210ENST00000449116 Q8N6K4 173 aa11.72□□□□□ -0.53
SHANK2-210ENST00000449116 OR52B4Q8NGK2 314 aa11.72□□□□□ -0.53
SHANK2-210ENST00000449116 CASTOR1Q8WTX7 329 aa11.72□□□□□ -0.53
SHANK2-210ENST00000449116 RITA1Q96K30 269 aa11.72□□□□□ -0.53
SHANK2-210ENST00000449116 HARBI1Q96MB7 349 aa11.72□□□□□ -0.53
SHANK2-210ENST00000449116 SEC22CQ9BRL7 303 aa11.72□□□□□ -0.53
SHANK2-210ENST00000449116 COMMD9Q9P000 198 aa11.72□□□□□ -0.53
SHANK2-210ENST00000449116 PITPNC1Q9UKF7 332 aa11.72□□□□□ -0.53
SHANK2-210ENST00000449116 FN1P02751 2386 aaKnown RBP11.72□□□□□ -0.53
SHANK2-210ENST00000449116 A6NDX4 124 aa11.71□□□□□ -0.53
SHANK2-210ENST00000449116 CDS2O95674 445 aa11.71□□□□□ -0.53
SHANK2-210ENST00000449116 NQO2P16083 231 aa11.71□□□□□ -0.53
SHANK2-210ENST00000449116 HNF4GQ14541 408 aa11.71□□□□□ -0.53
SHANK2-210ENST00000449116 LY6EQ16553 131 aa11.71□□□□□ -0.53
SHANK2-210ENST00000449116 OR8H1Q8NGG4 311 aa11.71□□□□□ -0.53
SHANK2-210ENST00000449116 ZNF431Q8TF32 576 aaPredicted RBP11.71□□□□□ -0.53
SHANK2-210ENST00000449116 ZNF418Q8TF45 676 aaPredicted RBP11.71□□□□□ -0.53
SHANK2-210ENST00000449116 TMEM56Q96MV1 263 aa11.71□□□□□ -0.53
SHANK2-210ENST00000449116 TSNAXQ99598 290 aaKnown RBP11.71□□□□□ -0.53
SHANK2-210ENST00000449116 GPN1Q9HCN4 374 aaPredicted RBP11.71□□□□□ -0.53
SHANK2-210ENST00000449116 PRR13Q9NZ81 148 aa11.71□□□□□ -0.53
SHANK2-210ENST00000449116 POMT1Q9Y6A1 747 aa11.71□□□□□ -0.53
SHANK2-210ENST00000449116 TMEM56-RWDD3S4R434 201 aa11.71□□□□□ -0.53
SHANK2-210ENST00000449116 PIGBOS1A0A0B4J2F0 54 aa11.7□□□□□ -0.54
SHANK2-210ENST00000449116 SRRM4A7MD48 611 aaKnown RBP11.7□□□□□ -0.54
SHANK2-210ENST00000449116 ATG12O94817 140 aa11.7□□□□□ -0.54
SHANK2-210ENST00000449116 OR2F2O95006 317 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms