RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 TPRX1Q8N7U7 411 aa11.86□□□□□ -0.51
LIMD1-202ENST00000440097 TMEM68Q96MH6 324 aa11.86□□□□□ -0.51
LIMD1-202ENST00000440097 CABLES2Q9BTV7 478 aa11.86□□□□□ -0.51
LIMD1-202ENST00000440097 RAXQ9Y2V3 346 aa11.86□□□□□ -0.51
LIMD1-202ENST00000440097 MSRB2Q9Y3D2 182 aa11.86□□□□□ -0.51
LIMD1-202ENST00000440097 ZFP92A6NM28 416 aa11.86□□□□□ -0.51
LIMD1-202ENST00000440097 ZNF705GA8MUZ8 300 aaPredicted RBP11.86□□□□□ -0.51
LIMD1-202ENST00000440097 TMEM50AO95807 157 aa11.86□□□□□ -0.51
LIMD1-202ENST00000440097 TDGF1P3P51864 188 aa11.86□□□□□ -0.51
LIMD1-202ENST00000440097 SELENOVP59797 346 aa11.86□□□□□ -0.51
LIMD1-202ENST00000440097 SRPXP78539 464 aa11.86□□□□□ -0.51
LIMD1-202ENST00000440097 C22orf34Q6ZV56 151 aa11.86□□□□□ -0.51
LIMD1-202ENST00000440097 WFDC8Q8IUA0 241 aa11.86□□□□□ -0.51
LIMD1-202ENST00000440097 ATG101Q9BSB4 218 aa11.86□□□□□ -0.51
LIMD1-202ENST00000440097 PPP1R3CQ9UQK1 317 aa11.86□□□□□ -0.51
LIMD1-202ENST00000440097 SPTBN1Q01082 2364 aaKnown RBP11.86□□□□□ -0.51
LIMD1-202ENST00000440097 TRBV24-1A0A075B6N3 115 aa11.85□□□□□ -0.51
LIMD1-202ENST00000440097 TMEM30CPA0ZSE6 113 aa11.85□□□□□ -0.51
LIMD1-202ENST00000440097 EDDM3AQ14507 147 aa11.85□□□□□ -0.51
LIMD1-202ENST00000440097 OR10G4Q8NGN3 311 aa11.85□□□□□ -0.51
LIMD1-202ENST00000440097 RNASEH2CQ8TDP1 164 aaKnown RBP11.85□□□□□ -0.51
LIMD1-202ENST00000440097 RAB24Q969Q5 203 aa11.85□□□□□ -0.51
LIMD1-202ENST00000440097 OR2V2Q96R30 315 aa11.85□□□□□ -0.51
LIMD1-202ENST00000440097 TMEM242Q9NWH2 141 aa11.85□□□□□ -0.51
LIMD1-202ENST00000440097 CACNA1AO00555 2505 aa11.85□□□□□ -0.51
LIMD1-202ENST00000440097 ADAM20O43506 726 aa11.85□□□□□ -0.51
LIMD1-202ENST00000440097 GLRXP35754 106 aa11.85□□□□□ -0.51
LIMD1-202ENST00000440097 H1FOOQ8IZA3 346 aaPredicted RBP11.85□□□□□ -0.51
LIMD1-202ENST00000440097 OR10V1Q8NGI7 309 aa11.85□□□□□ -0.51
LIMD1-202ENST00000440097 ACTR3CQ9C0K3 210 aaPredicted RBP11.85□□□□□ -0.51
LIMD1-202ENST00000440097 HES4Q9HCC6 221 aa11.85□□□□□ -0.51
LIMD1-202ENST00000440097 DCAF16Q9NXF7 216 aa11.85□□□□□ -0.51
LIMD1-202ENST00000440097 COL10A1Q03692 680 aa11.84□□□□□ -0.51
LIMD1-202ENST00000440097 PNRC1Q12796 327 aaPredicted RBP11.84□□□□□ -0.51
LIMD1-202ENST00000440097 CYB5R2Q6BCY4 276 aa11.84□□□□□ -0.51
LIMD1-202ENST00000440097 OR10A7Q8NGE5 316 aa11.84□□□□□ -0.51
LIMD1-202ENST00000440097 OR1P1Q8NH06 330 aa11.84□□□□□ -0.51
LIMD1-202ENST00000440097 CHD3Q12873 2000 aaKnown RBP11.84□□□□□ -0.51
LIMD1-202ENST00000440097 C16orf97H3BN30 126 aa11.84□□□□□ -0.51
LIMD1-202ENST00000440097 PGLYRP1O75594 196 aaPredicted RBP11.84□□□□□ -0.51
LIMD1-202ENST00000440097 OPN1MWP04001 364 aa11.84□□□□□ -0.51
LIMD1-202ENST00000440097 SERPINE2P07093 398 aa11.84□□□□□ -0.51
LIMD1-202ENST00000440097 OPN1MW2P0DN77 364 aa11.84□□□□□ -0.51
LIMD1-202ENST00000440097 OPN1MW3P0DN78 364 aa11.84□□□□□ -0.51
LIMD1-202ENST00000440097 MMP9P14780 707 aa11.84□□□□□ -0.51
LIMD1-202ENST00000440097 OR3A1P47881 315 aa11.84□□□□□ -0.51
LIMD1-202ENST00000440097 TMPRSS3P57727 454 aa11.84□□□□□ -0.51
LIMD1-202ENST00000440097 BEND2Q8NDZ0 799 aa11.84□□□□□ -0.51
LIMD1-202ENST00000440097 MRGPRDQ8TDS7 321 aa11.84□□□□□ -0.51
LIMD1-202ENST00000440097 GALMQ96C23 342 aa11.84□□□□□ -0.51
LIMD1-202ENST00000440097 RBM14Q96PK6 669 aaKnown RBP11.84□□□□□ -0.51
LIMD1-202ENST00000440097 ZNF665Q9H7R5 613 aa11.84□□□□□ -0.51
LIMD1-202ENST00000440097 METRNQ9UJH8 293 aa11.84□□□□□ -0.51
LIMD1-202ENST00000440097 SSUH2Q9Y2M2 353 aa11.84□□□□□ -0.51
LIMD1-202ENST00000440097 A0A1B0GWJ7 208 aa11.84□□□□□ -0.51
LIMD1-202ENST00000440097 CD55P08174 381 aa11.84□□□□□ -0.51
LIMD1-202ENST00000440097 G0S2P27469 103 aa11.84□□□□□ -0.51
LIMD1-202ENST00000440097 MRGPRGQ86SM5 289 aa11.84□□□□□ -0.51
LIMD1-202ENST00000440097 MOGAT3Q86VF5 341 aa11.84□□□□□ -0.51
LIMD1-202ENST00000440097 THNSL2Q86YJ6 484 aa11.84□□□□□ -0.51
LIMD1-202ENST00000440097 NINJ1Q92982 152 aa11.84□□□□□ -0.51
LIMD1-202ENST00000440097 SDF2L1Q9HCN8 221 aa11.84□□□□□ -0.51
LIMD1-202ENST00000440097 GAB2Q9UQC2 676 aa11.84□□□□□ -0.51
LIMD1-202ENST00000440097 IGHV3-13P01766 116 aa11.83□□□□□ -0.52
LIMD1-202ENST00000440097 CD40P25942 277 aa11.83□□□□□ -0.52
LIMD1-202ENST00000440097 TAS2R30P59541 319 aa11.83□□□□□ -0.52
LIMD1-202ENST00000440097 SELENOHQ8IZQ5 122 aaKnown RBP11.83□□□□□ -0.52
LIMD1-202ENST00000440097 SPIN2AQ99865 258 aa11.83□□□□□ -0.52
LIMD1-202ENST00000440097 SPIN2BQ9BPZ2 258 aa11.83□□□□□ -0.52
LIMD1-202ENST00000440097 CISD1Q9NZ45 108 aaKnown RBP11.83□□□□□ -0.52
LIMD1-202ENST00000440097 IGHV3OR15-7A0A075B7D8 119 aa11.83□□□□□ -0.52
LIMD1-202ENST00000440097 BCL2P10415 239 aa11.83□□□□□ -0.52
LIMD1-202ENST00000440097 F2RP25116 425 aa11.83□□□□□ -0.52
LIMD1-202ENST00000440097 RBPJQ06330 500 aa11.83□□□□□ -0.52
LIMD1-202ENST00000440097 TNFRSF9Q07011 255 aa11.83□□□□□ -0.52
LIMD1-202ENST00000440097 WDR25Q64LD2 544 aaPredicted RBP11.83□□□□□ -0.52
LIMD1-202ENST00000440097 TMEM108Q6UXF1 575 aa11.83□□□□□ -0.52
LIMD1-202ENST00000440097 DPPA3Q6W0C5 159 aa11.83□□□□□ -0.52
LIMD1-202ENST00000440097 OR1L1Q8NH94 360 aa11.83□□□□□ -0.52
LIMD1-202ENST00000440097 ATP5SQ99766 215 aa11.83□□□□□ -0.52
LIMD1-202ENST00000440097 RNF150Q9ULK6 438 aa11.83□□□□□ -0.52
LIMD1-202ENST00000440097 XKRY2A2RUG3 117 aa11.82□□□□□ -0.52
LIMD1-202ENST00000440097 CHST1O43916 411 aa11.82□□□□□ -0.52
LIMD1-202ENST00000440097 CCKARP32238 428 aa11.82□□□□□ -0.52
LIMD1-202ENST00000440097 FGF8P55075 233 aaPredicted RBP11.82□□□□□ -0.52
LIMD1-202ENST00000440097 BAXQ07812 192 aa11.82□□□□□ -0.52
LIMD1-202ENST00000440097 TESK1Q15569 626 aa11.82□□□□□ -0.52
LIMD1-202ENST00000440097 LTC4SQ16873 150 aa11.82□□□□□ -0.52
LIMD1-202ENST00000440097 LCN15Q6UWW0 184 aa11.82□□□□□ -0.52
LIMD1-202ENST00000440097 RFESDQ8TAC1 157 aa11.82□□□□□ -0.52
LIMD1-202ENST00000440097 HIPK2Q9H2X6 1198 aa11.82□□□□□ -0.52
LIMD1-202ENST00000440097 SRD5A3Q9H8P0 318 aa11.82□□□□□ -0.52
LIMD1-202ENST00000440097 MBNL3Q9NUK0 354 aaKnown RBP11.82□□□□□ -0.52
LIMD1-202ENST00000440097 TRAV1-1A0A0B4J248 108 aa11.82□□□□□ -0.52
LIMD1-202ENST00000440097 DFFBO76075 338 aa11.82□□□□□ -0.52
LIMD1-202ENST00000440097 EGR1P18146 543 aa11.82□□□□□ -0.52
LIMD1-202ENST00000440097 PRDX2P32119 198 aa11.82□□□□□ -0.52
LIMD1-202ENST00000440097 SPRNQ5BIV9 151 aa11.82□□□□□ -0.52
LIMD1-202ENST00000440097 ZNF787Q6DD87 383 aa11.82□□□□□ -0.52
LIMD1-202ENST00000440097 NECAP1Q8NC96 275 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms