RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 SLC25A24Q6NUK1 477 aa11.59□□□□□ -0.55
PTCHD3-201ENST00000438700 VHLLQ6RSH7 139 aa11.59□□□□□ -0.55
PTCHD3-201ENST00000438700 REC114Q7Z4M0 266 aa11.59□□□□□ -0.55
PTCHD3-201ENST00000438700 COQ2Q96H96 371 aa11.59□□□□□ -0.55
PTCHD3-201ENST00000438700 PACRGQ96M98 296 aaPredicted RBP11.59□□□□□ -0.55
PTCHD3-201ENST00000438700 HIST1H2BLQ99880 126 aa11.59□□□□□ -0.55
PTCHD3-201ENST00000438700 JKAMPQ9P055 326 aa11.59□□□□□ -0.55
PTCHD3-201ENST00000438700 GNG13Q9P2W3 67 aa11.59□□□□□ -0.55
PTCHD3-201ENST00000438700 PLCE1Q9P212 2302 aa11.59□□□□□ -0.55
PTCHD3-201ENST00000438700 ZFP92A6NM28 416 aa11.58□□□□□ -0.56
PTCHD3-201ENST00000438700 PHOX2AO14813 284 aa11.58□□□□□ -0.56
PTCHD3-201ENST00000438700 SYNGR2O43760 224 aa11.58□□□□□ -0.56
PTCHD3-201ENST00000438700 CD55P08174 381 aa11.58□□□□□ -0.56
PTCHD3-201ENST00000438700 METTL15P1P0C7V9 234 aa11.58□□□□□ -0.56
PTCHD3-201ENST00000438700 SSTR5P35346 364 aa11.58□□□□□ -0.56
PTCHD3-201ENST00000438700 RND1Q92730 232 aa11.58□□□□□ -0.56
PTCHD3-201ENST00000438700 VSIRQ9H7M9 311 aa11.58□□□□□ -0.56
PTCHD3-201ENST00000438700 CACNA1AO00555 2505 aa11.58□□□□□ -0.56
PTCHD3-201ENST00000438700 POLEQ07864 2286 aa11.58□□□□□ -0.56
PTCHD3-201ENST00000438700 SMG1Q96Q15 3661 aaKnown RBP11.58□□□□□ -0.56
PTCHD3-201ENST00000438700 IGHV3-43A0A0B4J1X8 118 aa11.58□□□□□ -0.56
PTCHD3-201ENST00000438700 BTBD17A6NE02 478 aa11.58□□□□□ -0.56
PTCHD3-201ENST00000438700 HBZP02008 142 aa11.58□□□□□ -0.56
PTCHD3-201ENST00000438700 IGHV3-43DP0DP04 118 aa11.58□□□□□ -0.56
PTCHD3-201ENST00000438700 FGF8P55075 233 aaPredicted RBP11.58□□□□□ -0.56
PTCHD3-201ENST00000438700 Q3ZCU0 254 aa11.58□□□□□ -0.56
PTCHD3-201ENST00000438700 ZNF506Q5JVG8 444 aa11.58□□□□□ -0.56
PTCHD3-201ENST00000438700 BTNL3Q6UXE8 466 aa11.58□□□□□ -0.56
PTCHD3-201ENST00000438700 THNSL2Q86YJ6 484 aa11.58□□□□□ -0.56
PTCHD3-201ENST00000438700 RFESDQ8TAC1 157 aa11.58□□□□□ -0.56
PTCHD3-201ENST00000438700 C5orf30Q96GV9 206 aa11.58□□□□□ -0.56
PTCHD3-201ENST00000438700 RAB40CQ96S21 281 aa11.58□□□□□ -0.56
PTCHD3-201ENST00000438700 HSPB1P04792 205 aaKnown RBP11.57□□□□□ -0.56
PTCHD3-201ENST00000438700 SLC25A6P12236 298 aa11.57□□□□□ -0.56
PTCHD3-201ENST00000438700 CD40P25942 277 aa11.57□□□□□ -0.56
PTCHD3-201ENST00000438700 GLRXP35754 106 aa11.57□□□□□ -0.56
PTCHD3-201ENST00000438700 CD200P41217 278 aa11.57□□□□□ -0.56
PTCHD3-201ENST00000438700 COL10A1Q03692 680 aa11.57□□□□□ -0.56
PTCHD3-201ENST00000438700 ZNF816Q0VGE8 651 aaPredicted RBP11.57□□□□□ -0.56
PTCHD3-201ENST00000438700 AKR1C8PQ5T2L2 129 aa11.57□□□□□ -0.56
PTCHD3-201ENST00000438700 OR2Z1Q8NG97 314 aa11.57□□□□□ -0.56
PTCHD3-201ENST00000438700 LSM10Q969L4 123 aaKnown RBP11.57□□□□□ -0.56
PTCHD3-201ENST00000438700 VKORC1Q9BQB6 163 aa11.57□□□□□ -0.56
PTCHD3-201ENST00000438700 RSG1Q9BU20 258 aa11.57□□□□□ -0.56
PTCHD3-201ENST00000438700 SMDT1Q9H4I9 107 aa11.57□□□□□ -0.56
PTCHD3-201ENST00000438700 UNKLQ9H9P5 680 aaKnown RBP11.57□□□□□ -0.56
PTCHD3-201ENST00000438700 DEFB108AA8MXU0 73 aa11.57□□□□□ -0.56
PTCHD3-201ENST00000438700 KRASP01116 189 aa11.57□□□□□ -0.56
PTCHD3-201ENST00000438700 CLEC12BQ2HXU8 276 aa11.57□□□□□ -0.56
PTCHD3-201ENST00000438700 FAM90A2PQ658T7 463 aa11.57□□□□□ -0.56
PTCHD3-201ENST00000438700 WFDC8Q8IUA0 241 aa11.57□□□□□ -0.56
PTCHD3-201ENST00000438700 FGFRL1Q8N441 504 aa11.57□□□□□ -0.56
PTCHD3-201ENST00000438700 NINJ1Q92982 152 aa11.57□□□□□ -0.56
PTCHD3-201ENST00000438700 GNPNAT1Q96EK6 184 aaPredicted RBP11.57□□□□□ -0.56
PTCHD3-201ENST00000438700 DCTN5Q9BTE1 182 aa11.57□□□□□ -0.56
PTCHD3-201ENST00000438700 ZNF665Q9H7R5 613 aa11.57□□□□□ -0.56
PTCHD3-201ENST00000438700 PSENENQ9NZ42 101 aa11.57□□□□□ -0.56
PTCHD3-201ENST00000438700 OOEPA6NGQ2 149 aa11.56□□□□□ -0.56
PTCHD3-201ENST00000438700 SLC31A2O15432 143 aa11.56□□□□□ -0.56
PTCHD3-201ENST00000438700 KLF3P57682 345 aaPredicted RBP11.56□□□□□ -0.56
PTCHD3-201ENST00000438700 LINC00205P59089 165 aa11.56□□□□□ -0.56
PTCHD3-201ENST00000438700 PKIAP61925 76 aa11.56□□□□□ -0.56
PTCHD3-201ENST00000438700 RPL30P62888 115 aaKnown RBP11.56□□□□□ -0.56
PTCHD3-201ENST00000438700 ARL16Q0P5N6 197 aa11.56□□□□□ -0.56
PTCHD3-201ENST00000438700 EDDM3AQ14507 147 aa11.56□□□□□ -0.56
PTCHD3-201ENST00000438700 LTC4SQ16873 150 aa11.56□□□□□ -0.56
PTCHD3-201ENST00000438700 WDR25Q64LD2 544 aaPredicted RBP11.56□□□□□ -0.56
PTCHD3-201ENST00000438700 LCN15Q6UWW0 184 aa11.56□□□□□ -0.56
PTCHD3-201ENST00000438700 SSX7Q7RTT5 188 aa11.56□□□□□ -0.56
PTCHD3-201ENST00000438700 ZNF645Q8N7E2 425 aa11.56□□□□□ -0.56
PTCHD3-201ENST00000438700 OR13A1Q8NGR1 328 aa11.56□□□□□ -0.56
PTCHD3-201ENST00000438700 LRRC29Q8WV35 223 aa11.56□□□□□ -0.56
PTCHD3-201ENST00000438700 A0A1B0GWJ7 208 aa11.56□□□□□ -0.56
PTCHD3-201ENST00000438700 WNT2P09544 360 aa11.56□□□□□ -0.56
PTCHD3-201ENST00000438700 G6PCP35575 357 aa11.56□□□□□ -0.56
PTCHD3-201ENST00000438700 ZNF124Q15973 351 aa11.56□□□□□ -0.56
PTCHD3-201ENST00000438700 SMIM21Q3B7S5 101 aa11.56□□□□□ -0.56
PTCHD3-201ENST00000438700 SPANXN5Q5MJ07 72 aa11.56□□□□□ -0.56
PTCHD3-201ENST00000438700 SLC35E4Q6ICL7 350 aa11.56□□□□□ -0.56
PTCHD3-201ENST00000438700 PLPPR2Q96GM1 343 aa11.56□□□□□ -0.56
PTCHD3-201ENST00000438700 NBASA2RRP1 2371 aa11.55□□□□□ -0.56
PTCHD3-201ENST00000438700 PIGBOS1A0A0B4J2F0 54 aa11.55□□□□□ -0.56
PTCHD3-201ENST00000438700 IFNA5P01569 189 aa11.55□□□□□ -0.56
PTCHD3-201ENST00000438700 IGHV3-13P01766 116 aa11.55□□□□□ -0.56
PTCHD3-201ENST00000438700 CASP6P55212 293 aa11.55□□□□□ -0.56
PTCHD3-201ENST00000438700 TAS2R30P59541 319 aa11.55□□□□□ -0.56
PTCHD3-201ENST00000438700 HNF4GQ14541 408 aa11.55□□□□□ -0.56
PTCHD3-201ENST00000438700 SLC35E3Q7Z769 313 aa11.55□□□□□ -0.56
PTCHD3-201ENST00000438700 SIRT7Q9NRC8 400 aa11.55□□□□□ -0.56
PTCHD3-201ENST00000438700 ADGRG4Q8IZF6 3080 aa11.55□□□□□ -0.56
PTCHD3-201ENST00000438700 TSTD3H0UI37 97 aa11.55□□□□□ -0.56
PTCHD3-201ENST00000438700 DFFBO76075 338 aa11.55□□□□□ -0.56
PTCHD3-201ENST00000438700 THBDP07204 575 aa11.55□□□□□ -0.56
PTCHD3-201ENST00000438700 TAS2R60P59551 318 aa11.55□□□□□ -0.56
PTCHD3-201ENST00000438700 TMEM108Q6UXF1 575 aa11.55□□□□□ -0.56
PTCHD3-201ENST00000438700 HAPLN4Q86UW8 402 aa11.55□□□□□ -0.56
PTCHD3-201ENST00000438700 ZNF664Q8N3J9 261 aa11.55□□□□□ -0.56
PTCHD3-201ENST00000438700 CD177Q8N6Q3 437 aa11.55□□□□□ -0.56
PTCHD3-201ENST00000438700 NECAP1Q8NC96 275 aa11.55□□□□□ -0.56
PTCHD3-201ENST00000438700 ELOA3CA0A087WX78 387 aaPredicted RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms