RNA–Protein interactions for RNA: ENST00000436282.1

TOP3B-206, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 2,890 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-206ENST00000436282 OR3A1P47881 315 aa12.53□□□□□ -0.4
TOP3B-206ENST00000436282 TMEM164Q5U3C3 297 aa12.53□□□□□ -0.4
TOP3B-206ENST00000436282 CST9LP1Q5W188 147 aa12.53□□□□□ -0.4
TOP3B-206ENST00000436282 MBNL3Q9NUK0 354 aaKnown RBP12.53□□□□□ -0.4
TOP3B-206ENST00000436282 AURKAIP1Q9NWT8 199 aaPredicted RBP12.53□□□□□ -0.4
TOP3B-206ENST00000436282 ESPL1Q14674 2120 aa12.53□□□□□ -0.4
TOP3B-206ENST00000436282 F6UZH7 168 aa12.52□□□□□ -0.4
TOP3B-206ENST00000436282 DLEU1O43261 78 aa12.52□□□□□ -0.4
TOP3B-206ENST00000436282 ZG16O60844 167 aa12.52□□□□□ -0.4
TOP3B-206ENST00000436282 ADMP35318 185 aa12.52□□□□□ -0.4
TOP3B-206ENST00000436282 ATP5G3P48201 142 aa12.52□□□□□ -0.4
TOP3B-206ENST00000436282 LHX2P50458 406 aa12.52□□□□□ -0.4
TOP3B-206ENST00000436282 YPEL3P61236 119 aaPredicted RBP12.52□□□□□ -0.4
TOP3B-206ENST00000436282 TMEM249Q2WGJ8 235 aa12.52□□□□□ -0.4
TOP3B-206ENST00000436282 ZBTB34Q8NCN2 500 aa12.52□□□□□ -0.4
TOP3B-206ENST00000436282 SGMS2Q8NHU3 365 aa12.52□□□□□ -0.4
TOP3B-206ENST00000436282 SDSLQ96GA7 329 aa12.52□□□□□ -0.4
TOP3B-206ENST00000436282 CIB3Q96Q77 187 aaPredicted RBP12.52□□□□□ -0.4
TOP3B-206ENST00000436282 C20orf144Q9BQM9 153 aa12.52□□□□□ -0.4
TOP3B-206ENST00000436282 TMEM208Q9BTX3 173 aa12.52□□□□□ -0.4
TOP3B-206ENST00000436282 TMEM106BQ9NUM4 274 aa12.52□□□□□ -0.4
TOP3B-206ENST00000436282 B4GALT7Q9UBV7 327 aa12.52□□□□□ -0.4
TOP3B-206ENST00000436282 IL17BQ9UHF5 180 aa12.52□□□□□ -0.4
TOP3B-206ENST00000436282 MRPS18CQ9Y3D5 142 aaKnown RBP12.52□□□□□ -0.4
TOP3B-206ENST00000436282 NDUFB4O95168 129 aa12.52□□□□□ -0.41
TOP3B-206ENST00000436282 OR2H2O95918 312 aa12.52□□□□□ -0.41
TOP3B-206ENST00000436282 ZNF645Q8N7E2 425 aa12.52□□□□□ -0.41
TOP3B-206ENST00000436282 SFRP2Q96HF1 295 aa12.52□□□□□ -0.41
TOP3B-206ENST00000436282 DERL1Q9BUN8 251 aa12.52□□□□□ -0.41
TOP3B-206ENST00000436282 OR51B6Q9H340 312 aa12.52□□□□□ -0.41
TOP3B-206ENST00000436282 MDFIC2A0A1B0GVS7 189 aa12.52□□□□□ -0.41
TOP3B-206ENST00000436282 YPEL1O60688 119 aa12.52□□□□□ -0.41
TOP3B-206ENST00000436282 ZNF816Q0VGE8 651 aaPredicted RBP12.52□□□□□ -0.41
TOP3B-206ENST00000436282 GAGE1Q13065 139 aa12.52□□□□□ -0.41
TOP3B-206ENST00000436282 YPEL2Q96QA6 119 aa12.52□□□□□ -0.41
TOP3B-206ENST00000436282 TTTY12Q9BZ98 90 aa12.52□□□□□ -0.41
TOP3B-206ENST00000436282 WIPI2Q9Y4P8 454 aa12.52□□□□□ -0.41
TOP3B-206ENST00000436282 TNFSF13O75888 250 aa12.51□□□□□ -0.41
TOP3B-206ENST00000436282 SFTPCP11686 197 aa12.51□□□□□ -0.41
TOP3B-206ENST00000436282 ARR3P36575 388 aa12.51□□□□□ -0.41
TOP3B-206ENST00000436282 CLDN18P56856 261 aa12.51□□□□□ -0.41
TOP3B-206ENST00000436282 UBE2G2P60604 165 aa12.51□□□□□ -0.41
TOP3B-206ENST00000436282 RPS16P62249 146 aaKnown RBP12.51□□□□□ -0.41
TOP3B-206ENST00000436282 SELENOTP62341 195 aa12.51□□□□□ -0.41
TOP3B-206ENST00000436282 PAFAH1B2P68402 229 aa12.51□□□□□ -0.41
TOP3B-206ENST00000436282 DHRS13Q6UX07 377 aa12.51□□□□□ -0.41
TOP3B-206ENST00000436282 TOMM20LQ6UXN7 152 aa12.51□□□□□ -0.41
TOP3B-206ENST00000436282 TCF23Q7RTU1 214 aa12.51□□□□□ -0.41
TOP3B-206ENST00000436282 ZNF114Q8NC26 417 aa12.51□□□□□ -0.41
TOP3B-206ENST00000436282 RAB1CQ92928 201 aa12.51□□□□□ -0.41
TOP3B-206ENST00000436282 ZDHHC16Q969W1 377 aa12.51□□□□□ -0.41
TOP3B-206ENST00000436282 SPRY4Q9C004 299 aa12.51□□□□□ -0.41
TOP3B-206ENST00000436282 GOLT1BQ9Y3E0 138 aa12.51□□□□□ -0.41
TOP3B-206ENST00000436282 CRYABP02511 175 aaKnown RBP12.51□□□□□ -0.41
TOP3B-206ENST00000436282 TPPP2P59282 170 aa12.51□□□□□ -0.41
TOP3B-206ENST00000436282 TEX43Q6ZNM6 134 aa12.51□□□□□ -0.41
TOP3B-206ENST00000436282 TMEM251Q8N6I4 163 aa12.51□□□□□ -0.41
TOP3B-206ENST00000436282 MIEN1Q9BRT3 115 aa12.51□□□□□ -0.41
TOP3B-206ENST00000436282 ABI3Q9P2A4 366 aa12.51□□□□□ -0.41
TOP3B-206ENST00000436282 RBFOX2O43251 390 aaKnown RBP eCLIP12.5□□□□□ -0.413e-8■■■□□ 15.5
TOP3B-206ENST00000436282 S1PR2O95136 353 aa12.5□□□□□ -0.41
TOP3B-206ENST00000436282 CA6P23280 308 aa12.5□□□□□ -0.41
TOP3B-206ENST00000436282 RPL30P62888 115 aaKnown RBP12.5□□□□□ -0.41
TOP3B-206ENST00000436282 Q8N7P7 452 aa12.5□□□□□ -0.41
TOP3B-206ENST00000436282 ZDHHC11Q9H8X9 412 aa12.5□□□□□ -0.41
TOP3B-206ENST00000436282 CHODLQ9H9P2 273 aa12.5□□□□□ -0.41
TOP3B-206ENST00000436282 PARD6AQ9NPB6 346 aa12.5□□□□□ -0.41
TOP3B-206ENST00000436282 PGPEP1LA6NFU8 196 aa12.5□□□□□ -0.41
TOP3B-206ENST00000436282 PLP2Q04941 152 aa12.5□□□□□ -0.41
TOP3B-206ENST00000436282 CATR1Q13166 79 aa12.5□□□□□ -0.41
TOP3B-206ENST00000436282 Q6ZWC4 215 aa12.5□□□□□ -0.41
TOP3B-206ENST00000436282 OR2D2Q9H210 308 aa12.5□□□□□ -0.41
TOP3B-206ENST00000436282 DOCK11Q5JSL3 2073 aa12.5□□□□□ -0.41
TOP3B-206ENST00000436282 BDP1A6H8Y1 2624 aa12.49□□□□□ -0.41
TOP3B-206ENST00000436282 DIDO1Q9BTC0 2240 aaKnown RBP12.49□□□□□ -0.41
TOP3B-206ENST00000436282 GRIFINA4D1Z8 144 aa12.49□□□□□ -0.41
TOP3B-206ENST00000436282 SP9P0CG40 484 aa12.49□□□□□ -0.41
TOP3B-206ENST00000436282 ESDP10768 282 aa12.49□□□□□ -0.41
TOP3B-206ENST00000436282 BMP5P22003 454 aa12.49□□□□□ -0.41
TOP3B-206ENST00000436282 CD82P27701 267 aa12.49□□□□□ -0.41
TOP3B-206ENST00000436282 EIF4EBP1Q13541 118 aaPredicted RBP12.49□□□□□ -0.41
TOP3B-206ENST00000436282 TPTE2P1Q5T6R2 138 aa12.49□□□□□ -0.41
TOP3B-206ENST00000436282 VASH2Q86V25 355 aa12.49□□□□□ -0.41
TOP3B-206ENST00000436282 Q8IYB0 196 aa12.49□□□□□ -0.41
TOP3B-206ENST00000436282 C12orf49Q9H741 205 aa12.49□□□□□ -0.41
TOP3B-206ENST00000436282 RYDENQ9NUL5 291 aaKnown RBP12.49□□□□□ -0.41
TOP3B-206ENST00000436282 TP53TG3Q9ULZ0 132 aa12.49□□□□□ -0.41
TOP3B-206ENST00000436282 RAB29O14966 203 aa12.49□□□□□ -0.41
TOP3B-206ENST00000436282 CLDN14O95500 239 aa12.49□□□□□ -0.41
TOP3B-206ENST00000436282 ZNF883P0CG24 379 aa12.49□□□□□ -0.41
TOP3B-206ENST00000436282 IRF2P14316 349 aa12.49□□□□□ -0.41
TOP3B-206ENST00000436282 RAC2P15153 192 aa12.49□□□□□ -0.41
TOP3B-206ENST00000436282 KITLGP21583 273 aa12.49□□□□□ -0.41
TOP3B-206ENST00000436282 RANP62826 216 aaKnown RBP12.49□□□□□ -0.41
TOP3B-206ENST00000436282 IGFBP7Q16270 282 aa12.49□□□□□ -0.41
TOP3B-206ENST00000436282 MCEMP1Q8IX19 187 aa12.49□□□□□ -0.41
TOP3B-206ENST00000436282 C5orf30Q96GV9 206 aa12.49□□□□□ -0.41
TOP3B-206ENST00000436282 TXNDC17Q9BRA2 123 aa12.49□□□□□ -0.41
TOP3B-206ENST00000436282 WDR83OSQ9Y284 106 aa12.49□□□□□ -0.41
TOP3B-206ENST00000436282 PRRC2CQ9Y520 2896 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms