RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 NAV3Q8IVL0 2385 aa13.05□□□□□ -0.32
SCARF1-203ENST00000434376 CLEC18AA5D8T8 446 aa13.05□□□□□ -0.32
SCARF1-203ENST00000434376 CLDN34H7C241 214 aa13.05□□□□□ -0.32
SCARF1-203ENST00000434376 IFNL4K9M1U5 179 aa13.05□□□□□ -0.32
SCARF1-203ENST00000434376 ZNF66Q6ZN08 573 aa13.05□□□□□ -0.32
SCARF1-203ENST00000434376 CLEC18CQ8NCF0 446 aa13.05□□□□□ -0.32
SCARF1-203ENST00000434376 OR8G5Q8NG78 346 aa13.05□□□□□ -0.32
SCARF1-203ENST00000434376 ZNF474Q6S9Z5 364 aaPredicted RBP13.05□□□□□ -0.32
SCARF1-203ENST00000434376 TMEM204Q9BSN7 226 aa13.05□□□□□ -0.32
SCARF1-203ENST00000434376 ARV1Q9H2C2 271 aa13.05□□□□□ -0.32
SCARF1-203ENST00000434376 DKK4Q9UBT3 224 aa13.05□□□□□ -0.32
SCARF1-203ENST00000434376 TANC2Q9HCD6 1990 aa13.04□□□□□ -0.32
SCARF1-203ENST00000434376 PRR33A8MZF0 331 aa13.04□□□□□ -0.32
SCARF1-203ENST00000434376 BATFQ16520 125 aa13.04□□□□□ -0.32
SCARF1-203ENST00000434376 H1FOOQ8IZA3 346 aaPredicted RBP13.04□□□□□ -0.32
SCARF1-203ENST00000434376 ABHD17AQ96GS6 310 aa13.04□□□□□ -0.32
SCARF1-203ENST00000434376 TMEM30CPA0ZSE6 113 aa13.04□□□□□ -0.32
SCARF1-203ENST00000434376 XKRY2A2RUG3 117 aa13.04□□□□□ -0.32
SCARF1-203ENST00000434376 M0R1X1 148 aa13.04□□□□□ -0.32
SCARF1-203ENST00000434376 SYNGR2O43760 224 aa13.04□□□□□ -0.32
SCARF1-203ENST00000434376 RTP5Q14D33 572 aa13.04□□□□□ -0.32
SCARF1-203ENST00000434376 SEM1Q6ZVN7 128 aa13.04□□□□□ -0.32
SCARF1-203ENST00000434376 COQ2Q96H96 371 aa13.04□□□□□ -0.32
SCARF1-203ENST00000434376 SLC25A22Q9H936 323 aa13.04□□□□□ -0.32
SCARF1-203ENST00000434376 A0A0U1RQK1 487 aa13.03□□□□□ -0.32
SCARF1-203ENST00000434376 ZG16O60844 167 aa13.03□□□□□ -0.32
SCARF1-203ENST00000434376 SS18L1O75177 396 aaPredicted RBP13.03□□□□□ -0.32
SCARF1-203ENST00000434376 SCGB1D1O95968 90 aa13.03□□□□□ -0.32
SCARF1-203ENST00000434376 UCP1P25874 307 aa13.03□□□□□ -0.32
SCARF1-203ENST00000434376 INO80CQ6PI98 192 aaPredicted RBP13.03□□□□□ -0.32
SCARF1-203ENST00000434376 SMIM7Q9BQ49 75 aa13.03□□□□□ -0.32
SCARF1-203ENST00000434376 GP6Q9HCN6 339 aa13.03□□□□□ -0.32
SCARF1-203ENST00000434376 CTXN2P0C2S0 81 aa13.03□□□□□ -0.32
SCARF1-203ENST00000434376 MYOD1P15172 320 aa13.03□□□□□ -0.32
SCARF1-203ENST00000434376 REG1BP48304 166 aa13.03□□□□□ -0.32
SCARF1-203ENST00000434376 NRN1LQ496H8 165 aa13.03□□□□□ -0.32
SCARF1-203ENST00000434376 RND1Q92730 232 aa13.03□□□□□ -0.32
SCARF1-203ENST00000434376 CCL13Q99616 98 aa13.03□□□□□ -0.32
SCARF1-203ENST00000434376 TNFSF13O75888 250 aa13.03□□□□□ -0.32
SCARF1-203ENST00000434376 PRDX2P32119 198 aa13.03□□□□□ -0.32
SCARF1-203ENST00000434376 TAS2R60P59551 318 aa13.03□□□□□ -0.32
SCARF1-203ENST00000434376 PMS2P11Q13670 270 aa13.03□□□□□ -0.32
SCARF1-203ENST00000434376 NMSQ5H8A3 153 aa13.03□□□□□ -0.32
SCARF1-203ENST00000434376 PIP4P1Q86T03 277 aa13.03□□□□□ -0.32
SCARF1-203ENST00000434376 CLDND2Q8NHS1 167 aa13.03□□□□□ -0.32
SCARF1-203ENST00000434376 RPRMQ9NS64 109 aa13.03□□□□□ -0.32
SCARF1-203ENST00000434376 DECR2Q9NUI1 292 aa13.03□□□□□ -0.32
SCARF1-203ENST00000434376 POLQO75417 2590 aa13.02□□□□□ -0.32
SCARF1-203ENST00000434376 FAM87AP0C7U9 286 aa13.02□□□□□ -0.32
SCARF1-203ENST00000434376 ZNF585BQ52M93 769 aa13.02□□□□□ -0.32
SCARF1-203ENST00000434376 ZNF497Q6ZNH5 498 aa13.02□□□□□ -0.32
SCARF1-203ENST00000434376 CD177Q8N6Q3 437 aa13.02□□□□□ -0.32
SCARF1-203ENST00000434376 GNPNAT1Q96EK6 184 aaPredicted RBP13.02□□□□□ -0.32
SCARF1-203ENST00000434376 APELAP0DMC3 54 aa13.02□□□□□ -0.33
SCARF1-203ENST00000434376 UCP3P55916 312 aa13.02□□□□□ -0.33
SCARF1-203ENST00000434376 BAXQ07812 192 aa13.02□□□□□ -0.33
SCARF1-203ENST00000434376 TCF15Q12870 199 aa13.02□□□□□ -0.33
SCARF1-203ENST00000434376 P2RY6Q15077 328 aa13.02□□□□□ -0.33
SCARF1-203ENST00000434376 KDF1Q8NAX2 398 aaPredicted RBP13.02□□□□□ -0.33
SCARF1-203ENST00000434376 LYRM2Q9NU23 88 aaPredicted RBP13.02□□□□□ -0.33
SCARF1-203ENST00000434376 HIVEP3Q5T1R4 2406 aa13.02□□□□□ -0.33
SCARF1-203ENST00000434376 PITX3O75364 302 aa13.01□□□□□ -0.33
SCARF1-203ENST00000434376 GYPAP02724 150 aa13.01□□□□□ -0.33
SCARF1-203ENST00000434376 SRPXP78539 464 aa13.01□□□□□ -0.33
SCARF1-203ENST00000434376 ACP7Q6ZNF0 438 aa13.01□□□□□ -0.33
SCARF1-203ENST00000434376 CBLN4Q9NTU7 201 aa13.01□□□□□ -0.33
SCARF1-203ENST00000434376 ELOA3CA0A087WX78 387 aaPredicted RBP13.01□□□□□ -0.33
SCARF1-203ENST00000434376 LINC00473A8K010 186 aa13.01□□□□□ -0.33
SCARF1-203ENST00000434376 ZNF891A8MT65 544 aaPredicted RBP13.01□□□□□ -0.33
SCARF1-203ENST00000434376 H0Y980 276 aa13.01□□□□□ -0.33
SCARF1-203ENST00000434376 HBE1P02100 147 aa13.01□□□□□ -0.33
SCARF1-203ENST00000434376 FGF7P21781 194 aa13.01□□□□□ -0.33
SCARF1-203ENST00000434376 PAX9P55771 341 aa13.01□□□□□ -0.33
SCARF1-203ENST00000434376 CCL17Q92583 94 aa13.01□□□□□ -0.33
SCARF1-203ENST00000434376 CXXC4Q9H2H0 198 aa13.01□□□□□ -0.33
SCARF1-203ENST00000434376 IGHV3-48P01763 117 aa13.01□□□□□ -0.33
SCARF1-203ENST00000434376 HSPB1P04792 205 aaKnown RBP13.01□□□□□ -0.33
SCARF1-203ENST00000434376 NCR3LG1Q68D85 454 aa13.01□□□□□ -0.33
SCARF1-203ENST00000434376 H2BFWTQ7Z2G1 175 aa13.01□□□□□ -0.33
SCARF1-203ENST00000434376 C11orf53Q8IXP5 236 aa13.01□□□□□ -0.33
SCARF1-203ENST00000434376 FAM216BQ8N7L0 139 aa13.01□□□□□ -0.33
SCARF1-203ENST00000434376 OR4X1Q8NH49 305 aa13.01□□□□□ -0.33
SCARF1-203ENST00000434376 OR5B12Q96R08 314 aa13.01□□□□□ -0.33
SCARF1-203ENST00000434376 OR4C12Q96R67 309 aa13.01□□□□□ -0.33
SCARF1-203ENST00000434376 DSCAMO60469 2012 aa13□□□□□ -0.33
SCARF1-203ENST00000434376 ZNF705FA8MVS1 300 aaPredicted RBP13□□□□□ -0.33
SCARF1-203ENST00000434376 ZNF705DP0CH99 300 aaPredicted RBP13□□□□□ -0.33
SCARF1-203ENST00000434376 ZNF705BP0CI00 300 aaPredicted RBP13□□□□□ -0.33
SCARF1-203ENST00000434376 HNF1AP20823 631 aa13□□□□□ -0.33
SCARF1-203ENST00000434376 GPR12P47775 334 aa13□□□□□ -0.33
SCARF1-203ENST00000434376 UBE2G2P60604 165 aa13□□□□□ -0.33
SCARF1-203ENST00000434376 SMIM21Q3B7S5 101 aa13□□□□□ -0.33
SCARF1-203ENST00000434376 CST9LP1Q5W188 147 aa13□□□□□ -0.33
SCARF1-203ENST00000434376 ZNF664Q8N3J9 261 aa13□□□□□ -0.33
SCARF1-203ENST00000434376 H1FXQ92522 213 aaKnown RBP13□□□□□ -0.33
SCARF1-203ENST00000434376 TMEM56Q96MV1 263 aa13□□□□□ -0.33
SCARF1-203ENST00000434376 YPEL4Q96NS1 127 aa13□□□□□ -0.33
SCARF1-203ENST00000434376 PKIBQ9C010 78 aa13□□□□□ -0.33
SCARF1-203ENST00000434376 FUT9Q9Y231 359 aa13□□□□□ -0.33
SCARF1-203ENST00000434376 TP53TG5Q9Y2B4 290 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms