RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 TLNRD1Q9H1K6 362 aa3.11□□□□□ -1.91
HMGB3-203ENST00000430118 PRO1933Q9H354 126 aa3.11□□□□□ -1.91
HMGB3-203ENST00000430118 RGCCQ9H4X1 137 aa3.11□□□□□ -1.91
HMGB3-203ENST00000430118 WDR55Q9H6Y2 383 aaPredicted RBP3.11□□□□□ -1.91
HMGB3-203ENST00000430118 METTL17Q9H7H0 456 aaPredicted RBP3.11□□□□□ -1.91
HMGB3-203ENST00000430118 UQCC1Q9NVA1 299 aa3.11□□□□□ -1.91
HMGB3-203ENST00000430118 MRPL22Q9NWU5 206 aaKnown RBP3.11□□□□□ -1.91
HMGB3-203ENST00000430118 MS4A12Q9NXJ0 267 aa3.11□□□□□ -1.91
HMGB3-203ENST00000430118 DOK5Q9P104 306 aa3.11□□□□□ -1.91
HMGB3-203ENST00000430118 OR1A1Q9P1Q5 309 aa3.11□□□□□ -1.91
HMGB3-203ENST00000430118 RPS6KB2Q9UBS0 482 aa3.11□□□□□ -1.91
HMGB3-203ENST00000430118 A0A087WWC5 75 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 TGIF2-C20orf24A0A0A6YYL0 155 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 IGHV7-81A0A0B4J1V7 117 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 A0A1B0GUS0 222 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 OR5B21A6NL26 309 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 SHISA9B4DS77 424 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 F6UZH7 168 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 MAGEB4O15481 346 aaPredicted RBP3.1□□□□□ -1.91
HMGB3-203ENST00000430118 BCL2L11O43521 198 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 GSTZ1O43708 216 aaPredicted RBP3.1□□□□□ -1.91
HMGB3-203ENST00000430118 SSNA1O43805 119 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 MFSD11O43934 449 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 EEDO75530 441 aaKnown RBP3.1□□□□□ -1.91
HMGB3-203ENST00000430118 ADAP1O75689 374 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 DUSP14O95147 198 aaKnown RBP3.1□□□□□ -1.91
HMGB3-203ENST00000430118 SCELO95171 688 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 PTHP01270 115 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 C1QCP02747 245 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 ADRA2AP08913 450 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 CST2P09228 141 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 PIRTP0C851 137 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 GZMBP10144 247 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 CD79AP11912 226 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 PGAM2P15259 253 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 ZNF43P17038 809 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 ZBTB25P24278 435 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 MIPP30301 263 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 OPRM1P35372 400 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 AKR1C3P42330 323 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 CDKN2BP42772 138 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 RFX3P48380 749 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 TTPAP49638 278 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 ZNF140P52738 457 aaPredicted RBP3.1□□□□□ -1.91
HMGB3-203ENST00000430118 CRISP1P54107 249 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 DIO3P55073 304 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 ATP5J2P56134 94 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 RHOGP84095 191 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 OR5I1Q13606 314 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 RCAN2Q14206 197 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 PTGES3Q15185 160 aaKnown RBP3.1□□□□□ -1.91
HMGB3-203ENST00000430118 MAPK14Q16539 360 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 CLEC12BQ2HXU8 276 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 HIKESHIQ53FT3 197 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 OCIAD2Q56VL3 154 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 BEX5Q5H9J7 111 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 TCTEX1D4Q5JR98 221 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 KLF17Q5JT82 389 aaPredicted RBP3.1□□□□□ -1.91
HMGB3-203ENST00000430118 KHDRBS2Q5VWX1 349 aaKnown RBP3.1□□□□□ -1.91
HMGB3-203ENST00000430118 OR10K2Q6IF99 312 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 FAHD1Q6P587 224 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 CNIH2Q6PI25 160 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 CD200R1LQ6Q8B3 271 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 REG3GQ6UW15 175 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 UNQ9370/PRO34162Q6UXP9 181 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 MRPL21Q7Z2W9 205 aaKnown RBP3.1□□□□□ -1.91
HMGB3-203ENST00000430118 ZNF329Q86UD4 541 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 SLC25A42Q86VD7 318 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 PPP1R27Q86WC6 154 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 RPS19BP1Q86WX3 136 aaKnown RBP3.1□□□□□ -1.91
HMGB3-203ENST00000430118 FAM58AQ8N1B3 248 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 RPRMLQ8N4K4 120 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 JAGN1Q8N5M9 183 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 C11orf42Q8N5U0 333 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 TPRX1Q8N7U7 411 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 OR4S1Q8NGB4 309 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 OR10W1Q8NGF6 305 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 OR1S2Q8NGQ3 325 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 OR4S2Q8NH73 311 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 ZNF596Q8TC21 504 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 RAB1CQ92928 201 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 IMMP1LQ96LU5 166 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 C1orf147Q96MC9 270 aaPredicted RBP3.1□□□□□ -1.91
HMGB3-203ENST00000430118 JSRP1Q96MG2 331 aaPredicted RBP3.1□□□□□ -1.91
HMGB3-203ENST00000430118 KCTD7Q96MP8 289 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 PRAP1Q96NZ9 151 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 SMIM14Q96QK8 99 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 FAAP24Q9BTP7 215 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 SELENOIQ9C0D9 397 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 C20orf85Q9H1P6 137 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 RBKSQ9H477 322 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 GEMIN7Q9H840 131 aaKnown RBP3.1□□□□□ -1.91
HMGB3-203ENST00000430118 TMEM27Q9HBJ8 222 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 EML4Q9HC35 981 aaKnown RBP3.1□□□□□ -1.91
HMGB3-203ENST00000430118 COMMD3Q9UBI1 195 aa3.1□□□□□ -1.91
HMGB3-203ENST00000430118 LSM2Q9Y333 95 aaKnown RBP3.1□□□□□ -1.91
HMGB3-203ENST00000430118 TBL2Q9Y4P3 447 aaKnown RBP3.1□□□□□ -1.91
HMGB3-203ENST00000430118 RBM7Q9Y580 266 aaKnown RBP3.1□□□□□ -1.91
HMGB3-203ENST00000430118 MDC1Q14676 2089 aaKnown RBP3.09□□□□□ -1.91
HMGB3-203ENST00000430118 TRAV8-7A0A075B6U6 113 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 188.6 ms