RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 ICAM4Q14773 271 aa6.83□□□□□ -1.32
HPS4-205ENST00000429411 RNF151Q2KHN1 245 aa6.83□□□□□ -1.32
HPS4-205ENST00000429411 PDLIM3Q53GG5 364 aaPredicted RBP6.83□□□□□ -1.32
HPS4-205ENST00000429411 Q6ZPA2 131 aa6.83□□□□□ -1.32
HPS4-205ENST00000429411 FGFRL1Q8N441 504 aa6.83□□□□□ -1.32
HPS4-205ENST00000429411 PRDM14Q9GZV8 571 aa6.83□□□□□ -1.32
HPS4-205ENST00000429411 RNF122Q9H9V4 155 aa6.83□□□□□ -1.32
HPS4-205ENST00000429411 POLDIP2Q9Y2S7 368 aa6.83□□□□□ -1.32
HPS4-205ENST00000429411 ZFHX4Q86UP3 3567 aa6.83□□□□□ -1.32
HPS4-205ENST00000429411 ARFGEF3Q5TH69 2177 aa6.83□□□□□ -1.32
HPS4-205ENST00000429411 TRAV24A0A0B4J272 114 aa6.83□□□□□ -1.32
HPS4-205ENST00000429411 H0Y980 276 aa6.83□□□□□ -1.32
HPS4-205ENST00000429411 DNPH1O43598 174 aa6.83□□□□□ -1.32
HPS4-205ENST00000429411 IGLV3-1P01715 115 aa6.83□□□□□ -1.32
HPS4-205ENST00000429411 PRB1P04280 392 aa6.83□□□□□ -1.32
HPS4-205ENST00000429411 TRGC1P0CF51 173 aa6.83□□□□□ -1.32
HPS4-205ENST00000429411 UCP1P25874 307 aa6.83□□□□□ -1.32
HPS4-205ENST00000429411 CD1BP29016 333 aa6.83□□□□□ -1.32
HPS4-205ENST00000429411 MC5RP33032 325 aa6.83□□□□□ -1.32
HPS4-205ENST00000429411 OR13D1Q8NGV5 346 aa6.83□□□□□ -1.32
HPS4-205ENST00000429411 PLPPR1Q8TBJ4 325 aa6.83□□□□□ -1.32
HPS4-205ENST00000429411 MRPL30Q8TCC3 161 aaKnown RBP6.83□□□□□ -1.32
HPS4-205ENST00000429411 ZDHHC16Q969W1 377 aa6.83□□□□□ -1.32
HPS4-205ENST00000429411 DCTN5Q9BTE1 182 aa6.83□□□□□ -1.32
HPS4-205ENST00000429411 ARV1Q9H2C2 271 aa6.83□□□□□ -1.32
HPS4-205ENST00000429411 PATZ1Q9HBE1 687 aaKnown RBP6.83□□□□□ -1.32
HPS4-205ENST00000429411 GCM1Q9NP62 436 aa6.83□□□□□ -1.32
HPS4-205ENST00000429411 ABCA4P78363 2273 aa6.82□□□□□ -1.32
HPS4-205ENST00000429411 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.82□□□□□ -1.32
HPS4-205ENST00000429411 PAGE4O60829 102 aa6.82□□□□□ -1.32
HPS4-205ENST00000429411 FCGR3BO75015 233 aa6.82□□□□□ -1.32
HPS4-205ENST00000429411 BCL2P10415 239 aa6.82□□□□□ -1.32
HPS4-205ENST00000429411 DEFB109BQ30KR1 87 aa6.82□□□□□ -1.32
HPS4-205ENST00000429411 PIP4P1Q86T03 277 aa6.82□□□□□ -1.32
HPS4-205ENST00000429411 BOD1L2Q8IYS8 172 aa6.82□□□□□ -1.32
HPS4-205ENST00000429411 SCCPDHQ8NBX0 429 aa6.82□□□□□ -1.32
HPS4-205ENST00000429411 OR10G4Q8NGN3 311 aa6.82□□□□□ -1.32
HPS4-205ENST00000429411 OR10G9Q8NGN4 311 aa6.82□□□□□ -1.32
HPS4-205ENST00000429411 OR10G7Q8NGN6 311 aa6.82□□□□□ -1.32
HPS4-205ENST00000429411 RCC1LQ96I51 464 aaKnown RBP6.82□□□□□ -1.32
HPS4-205ENST00000429411 CPAMD8Q8IZJ3 1885 aa6.82□□□□□ -1.32
HPS4-205ENST00000429411 CXorf65A6NEN9 183 aa6.82□□□□□ -1.32
HPS4-205ENST00000429411 NKX2-8O15522 239 aa6.82□□□□□ -1.32
HPS4-205ENST00000429411 SPINK4O60575 86 aa6.82□□□□□ -1.32
HPS4-205ENST00000429411 DKK1O94907 266 aa6.82□□□□□ -1.32
HPS4-205ENST00000429411 SLC25A6P12236 298 aa6.82□□□□□ -1.32
HPS4-205ENST00000429411 ABLIM2Q6H8Q1 611 aa6.82□□□□□ -1.32
HPS4-205ENST00000429411 SPSB3Q6PJ21 355 aa6.82□□□□□ -1.32
HPS4-205ENST00000429411 VKORC1L1Q8N0U8 176 aa6.82□□□□□ -1.32
HPS4-205ENST00000429411 DRAM1Q8N682 238 aa6.82□□□□□ -1.32
HPS4-205ENST00000429411 NUDT10Q8NFP7 164 aa6.82□□□□□ -1.32
HPS4-205ENST00000429411 GATAD1Q8WUU5 269 aa6.82□□□□□ -1.32
HPS4-205ENST00000429411 MEGF10Q96KG7 1140 aa6.82□□□□□ -1.32
HPS4-205ENST00000429411 ZNF703Q9H7S9 590 aaPredicted RBP6.82□□□□□ -1.32
HPS4-205ENST00000429411 METTL1Q9UBP6 276 aaKnown RBP6.82□□□□□ -1.32
HPS4-205ENST00000429411 RELNP78509 3460 aa6.82□□□□□ -1.32
HPS4-205ENST00000429411 CHD3Q12873 2000 aaKnown RBP6.82□□□□□ -1.32
HPS4-205ENST00000429411 ABCA12Q86UK0 2595 aa6.82□□□□□ -1.32
HPS4-205ENST00000429411 OR5B21A6NL26 309 aa6.82□□□□□ -1.32
HPS4-205ENST00000429411 ZNF705FA8MVS1 300 aaPredicted RBP6.82□□□□□ -1.32
HPS4-205ENST00000429411 TSTD3H0UI37 97 aa6.82□□□□□ -1.32
HPS4-205ENST00000429411 J3QT63 122 aa6.82□□□□□ -1.32
HPS4-205ENST00000429411 ZG16O60844 167 aa6.82□□□□□ -1.32
HPS4-205ENST00000429411 RAMP3O60896 148 aa6.82□□□□□ -1.32
HPS4-205ENST00000429411 SNRPCP09234 159 aaKnown RBP6.82□□□□□ -1.32
HPS4-205ENST00000429411 ZNF705DP0CH99 300 aaPredicted RBP6.82□□□□□ -1.32
HPS4-205ENST00000429411 ZNF705BP0CI00 300 aaPredicted RBP6.82□□□□□ -1.32
HPS4-205ENST00000429411 AGAP20933 346 aa6.82□□□□□ -1.32
HPS4-205ENST00000429411 SSTR5P35346 364 aa6.82□□□□□ -1.32
HPS4-205ENST00000429411 ID3Q02535 119 aa6.82□□□□□ -1.32
HPS4-205ENST00000429411 ARL16Q0P5N6 197 aa6.82□□□□□ -1.32
HPS4-205ENST00000429411 TMEM42Q69YG0 159 aa6.82□□□□□ -1.32
HPS4-205ENST00000429411 CDPF1Q6NVV7 123 aa6.82□□□□□ -1.32
HPS4-205ENST00000429411 OR5D13Q8NGL4 314 aa6.82□□□□□ -1.32
HPS4-205ENST00000429411 CLDND2Q8NHS1 167 aa6.82□□□□□ -1.32
HPS4-205ENST00000429411 DIRC2Q96SL1 478 aa6.82□□□□□ -1.32
HPS4-205ENST00000429411 FGF23Q9GZV9 251 aaPredicted RBP6.82□□□□□ -1.32
HPS4-205ENST00000429411 CEP192Q8TEP8 1941 aa6.82□□□□□ -1.32
HPS4-205ENST00000429411 A0A1B0GU03 582 aa6.81□□□□□ -1.32
HPS4-205ENST00000429411 NEURL1O76050 574 aa6.81□□□□□ -1.32
HPS4-205ENST00000429411 SCGB1D1O95968 90 aa6.81□□□□□ -1.32
HPS4-205ENST00000429411 HAND1O96004 215 aa6.81□□□□□ -1.32
HPS4-205ENST00000429411 FAM87AP0C7U9 286 aa6.81□□□□□ -1.32
HPS4-205ENST00000429411 FAM3BP58499 235 aaPredicted RBP6.81□□□□□ -1.32
HPS4-205ENST00000429411 KHDC3LQ587J8 217 aa6.81□□□□□ -1.32
HPS4-205ENST00000429411 TGIF2LXQ8IUE1 241 aa6.81□□□□□ -1.32
HPS4-205ENST00000429411 LRTM2Q8N967 370 aa6.81□□□□□ -1.32
HPS4-205ENST00000429411 OR5P3Q8WZ94 311 aa6.81□□□□□ -1.32
HPS4-205ENST00000429411 LEAP2Q969E1 77 aa6.81□□□□□ -1.32
HPS4-205ENST00000429411 MUCL1Q96DR8 90 aa6.81□□□□□ -1.32
HPS4-205ENST00000429411 TMEM56Q96MV1 263 aa6.81□□□□□ -1.32
HPS4-205ENST00000429411 ZNF48Q96MX3 618 aaPredicted RBP6.81□□□□□ -1.32
HPS4-205ENST00000429411 KLF13Q9Y2Y9 288 aaPredicted RBP6.81□□□□□ -1.32
HPS4-205ENST00000429411 MPC1Q9Y5U8 109 aa6.81□□□□□ -1.32
HPS4-205ENST00000429411 TMEM56-RWDD3S4R434 201 aa6.81□□□□□ -1.32
HPS4-205ENST00000429411 CFAP46Q8IYW2 2715 aa6.81□□□□□ -1.32
HPS4-205ENST00000429411 IGHV3OR15-7A0A075B7D8 119 aa6.81□□□□□ -1.32
HPS4-205ENST00000429411 RNF212BA8MTL3 300 aa6.81□□□□□ -1.32
HPS4-205ENST00000429411 S1PR2O95136 353 aa6.81□□□□□ -1.32
HPS4-205ENST00000429411 GALR1P47211 349 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms