RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 DOCK9Q9BZ29 2069 aa6.11□□□□□ -1.43
CNOT4-206ENST00000428680 PSCAO43653 123 aa6.11□□□□□ -1.43
CNOT4-206ENST00000428680 FCER1GP30273 86 aa6.11□□□□□ -1.43
CNOT4-206ENST00000428680 RPS27AP62979 156 aaKnown RBP6.11□□□□□ -1.43
CNOT4-206ENST00000428680 SNRPNP63162 240 aaKnown RBP6.11□□□□□ -1.43
CNOT4-206ENST00000428680 DGCR2P98153 550 aa6.11□□□□□ -1.43
CNOT4-206ENST00000428680 CD69Q07108 199 aa6.11□□□□□ -1.43
CNOT4-206ENST00000428680 LDLRAD2Q5SZI1 272 aa6.11□□□□□ -1.43
CNOT4-206ENST00000428680 C10orf113Q5VZT2 155 aa6.11□□□□□ -1.43
CNOT4-206ENST00000428680 WDR25Q64LD2 544 aaPredicted RBP6.11□□□□□ -1.43
CNOT4-206ENST00000428680 LCNL1Q6ZST4 164 aa6.11□□□□□ -1.43
CNOT4-206ENST00000428680 C5orf17Q8NAS9 161 aa6.11□□□□□ -1.43
CNOT4-206ENST00000428680 TMED6Q8WW62 240 aa6.11□□□□□ -1.43
CNOT4-206ENST00000428680 DMRTA2Q96SC8 542 aa6.11□□□□□ -1.43
CNOT4-206ENST00000428680 MESP1Q9BRJ9 268 aa6.11□□□□□ -1.43
CNOT4-206ENST00000428680 RPS10P5Q9NQ39 176 aa6.11□□□□□ -1.43
CNOT4-206ENST00000428680 LINC00312Q9Y6C7 94 aa6.11□□□□□ -1.43
CNOT4-206ENST00000428680 SOCS1O15524 211 aa6.1□□□□□ -1.43
CNOT4-206ENST00000428680 CCL3L1P16619 93 aa6.1□□□□□ -1.43
CNOT4-206ENST00000428680 PTBP1P26599 531 aaKnown RBP eCLIP6.1□□□□□ -1.438e-7■■■■□ 22.3
CNOT4-206ENST00000428680 RPS19P39019 145 aaKnown RBP6.1□□□□□ -1.43
CNOT4-206ENST00000428680 ZP1P60852 638 aa6.1□□□□□ -1.43
CNOT4-206ENST00000428680 TIAL1Q01085 375 aaKnown RBP eCLIP6.1□□□□□ -1.43
CNOT4-206ENST00000428680 PRB3Q04118 309 aaPredicted RBP6.1□□□□□ -1.43
CNOT4-206ENST00000428680 SNAI3Q3KNW1 292 aa6.1□□□□□ -1.43
CNOT4-206ENST00000428680 FFAR4Q5NUL3 377 aa6.1□□□□□ -1.43
CNOT4-206ENST00000428680 SPANXN1Q5VSR9 72 aa6.1□□□□□ -1.43
CNOT4-206ENST00000428680 ZNF66Q6ZN08 573 aa6.1□□□□□ -1.43
CNOT4-206ENST00000428680 IL17RELQ6ZVW7 336 aa6.1□□□□□ -1.43
CNOT4-206ENST00000428680 LURAP1LQ8IV03 231 aa6.1□□□□□ -1.43
CNOT4-206ENST00000428680 OR4P4Q8NGL7 312 aa6.1□□□□□ -1.43
CNOT4-206ENST00000428680 MRGPRFQ96AM1 343 aa6.1□□□□□ -1.43
CNOT4-206ENST00000428680 ADAT3Q96EY9 351 aaPredicted RBP6.1□□□□□ -1.43
CNOT4-206ENST00000428680 PLSCR2Q9NRY7 297 aa6.1□□□□□ -1.43
CNOT4-206ENST00000428680 TECRQ9NZ01 308 aaKnown RBP6.1□□□□□ -1.43
CNOT4-206ENST00000428680 LINC00527Q9UJ94 153 aa6.1□□□□□ -1.43
CNOT4-206ENST00000428680 MOB4Q9Y3A3 225 aa6.1□□□□□ -1.43
CNOT4-206ENST00000428680 ZNF207O43670 478 aaKnown RBP6.1□□□□□ -1.43
CNOT4-206ENST00000428680 F12P00748 615 aaPredicted RBP6.1□□□□□ -1.43
CNOT4-206ENST00000428680 RPL7P18124 248 aaKnown RBP6.1□□□□□ -1.43
CNOT4-206ENST00000428680 CD24P25063 80 aa6.1□□□□□ -1.43
CNOT4-206ENST00000428680 PSMB6P28072 239 aa6.1□□□□□ -1.43
CNOT4-206ENST00000428680 S100A11P31949 105 aa6.1□□□□□ -1.43
CNOT4-206ENST00000428680 FCGR2BP31994 310 aaPredicted RBP6.1□□□□□ -1.43
CNOT4-206ENST00000428680 OPRL1P41146 370 aa6.1□□□□□ -1.43
CNOT4-206ENST00000428680 C19orf54Q5BKX5 351 aa6.1□□□□□ -1.43
CNOT4-206ENST00000428680 FAM78BQ5VT40 261 aa6.1□□□□□ -1.43
CNOT4-206ENST00000428680 TEX38Q6PEX7 206 aa6.1□□□□□ -1.43
CNOT4-206ENST00000428680 TBC1D26Q86UD7 250 aa6.1□□□□□ -1.43
CNOT4-206ENST00000428680 TMEM219Q86XT9 240 aa6.1□□□□□ -1.43
CNOT4-206ENST00000428680 DRAM1Q8N682 238 aa6.1□□□□□ -1.43
CNOT4-206ENST00000428680 RPUSD4Q96CM3 377 aaKnown RBP6.1□□□□□ -1.43
CNOT4-206ENST00000428680 NAA60Q9H7X0 242 aa6.1□□□□□ -1.43
CNOT4-206ENST00000428680 RCL1Q9Y2P8 373 aaKnown RBP6.1□□□□□ -1.43
CNOT4-206ENST00000428680 LHFPL6Q9Y693 200 aa6.1□□□□□ -1.43
CNOT4-206ENST00000428680 TMEM272A0A1B0GTI8 110 aa6.1□□□□□ -1.43
CNOT4-206ENST00000428680 DPRXA6NFQ7 191 aa6.1□□□□□ -1.43
CNOT4-206ENST00000428680 OR4C45A6NMZ5 311 aa6.1□□□□□ -1.43
CNOT4-206ENST00000428680 H0Y980 276 aa6.1□□□□□ -1.43
CNOT4-206ENST00000428680 BOLA2-SMG1P6H3BVE0 249 aa6.1□□□□□ -1.43
CNOT4-206ENST00000428680 EREGO14944 169 aa6.1□□□□□ -1.43
CNOT4-206ENST00000428680 SIX6O95475 246 aa6.1□□□□□ -1.43
CNOT4-206ENST00000428680 CFDP00746 253 aaPredicted RBP6.1□□□□□ -1.43
CNOT4-206ENST00000428680 ZNF735P0CB33 412 aa6.1□□□□□ -1.43
CNOT4-206ENST00000428680 SELENOTP62341 195 aa6.1□□□□□ -1.43
CNOT4-206ENST00000428680 HIST1H1AQ02539 215 aaPredicted RBP6.1□□□□□ -1.43
CNOT4-206ENST00000428680 TMEM41BQ5BJD5 291 aa6.1□□□□□ -1.43
CNOT4-206ENST00000428680 TMEM123Q8N131 208 aa6.1□□□□□ -1.43
CNOT4-206ENST00000428680 ZDHHC22Q8N966 263 aa6.1□□□□□ -1.43
CNOT4-206ENST00000428680 OR10S1Q8NGN2 331 aa6.1□□□□□ -1.43
CNOT4-206ENST00000428680 TLN2Q9Y4G6 2542 aa6.1□□□□□ -1.43
CNOT4-206ENST00000428680 J3QLI3 93 aa6.1□□□□□ -1.43
CNOT4-206ENST00000428680 CRXO43186 299 aaPredicted RBP6.1□□□□□ -1.43
CNOT4-206ENST00000428680 SYNGR2O43760 224 aa6.1□□□□□ -1.43
CNOT4-206ENST00000428680 IGHV1-46P01743 117 aa6.1□□□□□ -1.43
CNOT4-206ENST00000428680 GPR183P32249 361 aa6.1□□□□□ -1.43
CNOT4-206ENST00000428680 RND2P52198 227 aa6.1□□□□□ -1.43
CNOT4-206ENST00000428680 FAM219BQ5XKK7 198 aa6.1□□□□□ -1.43
CNOT4-206ENST00000428680 ABLIM2Q6H8Q1 611 aa6.1□□□□□ -1.43
CNOT4-206ENST00000428680 BPIFA4PQ86YQ2 179 aa6.1□□□□□ -1.43
CNOT4-206ENST00000428680 TMEM54Q969K7 222 aa6.1□□□□□ -1.43
CNOT4-206ENST00000428680 LSM10Q969L4 123 aaKnown RBP6.1□□□□□ -1.43
CNOT4-206ENST00000428680 WDFY2Q96P53 400 aa6.1□□□□□ -1.43
CNOT4-206ENST00000428680 LINC01587Q99440 93 aa6.1□□□□□ -1.43
CNOT4-206ENST00000428680 VGLL1Q99990 258 aa6.1□□□□□ -1.43
CNOT4-206ENST00000428680 PARP12Q9H0J9 701 aaKnown RBP6.1□□□□□ -1.43
CNOT4-206ENST00000428680 G6PC2Q9NQR9 355 aa6.1□□□□□ -1.43
CNOT4-206ENST00000428680 SHANK1Q9Y566 2161 aa6.09□□□□□ -1.43
CNOT4-206ENST00000428680 PLPP2O43688 288 aa6.09□□□□□ -1.43
CNOT4-206ENST00000428680 GPX1P07203 203 aa6.09□□□□□ -1.43
CNOT4-206ENST00000428680 ZNF90Q03938 601 aa6.09□□□□□ -1.43
CNOT4-206ENST00000428680 ATP6V1FQ16864 119 aa6.09□□□□□ -1.43
CNOT4-206ENST00000428680 ACP7Q6ZNF0 438 aa6.09□□□□□ -1.43
CNOT4-206ENST00000428680 BAGE3Q86Y29 109 aa6.09□□□□□ -1.43
CNOT4-206ENST00000428680 BAGE2Q86Y30 109 aa6.09□□□□□ -1.43
CNOT4-206ENST00000428680 DMRTC2Q8IXT2 367 aaPredicted RBP6.09□□□□□ -1.43
CNOT4-206ENST00000428680 TMEM229BQ8NBD8 167 aa6.09□□□□□ -1.43
CNOT4-206ENST00000428680 SLC24A4Q8NFF2 622 aa6.09□□□□□ -1.43
CNOT4-206ENST00000428680 TMEM133Q9H2Q1 129 aa6.09□□□□□ -1.43
CNOT4-206ENST00000428680 A0A1B0GUS0 222 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms