RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 TSC22D3Q99576 134 aa4.37□□□□□ -1.71
C9orf3-205ENST00000427193 DCTN5Q9BTE1 182 aa4.37□□□□□ -1.71
C9orf3-205ENST00000427193 CABLES2Q9BTV7 478 aa4.37□□□□□ -1.71
C9orf3-205ENST00000427193 BPESC1Q9GZL8 116 aa4.37□□□□□ -1.71
C9orf3-205ENST00000427193 C12orf4Q9NQ89 552 aa4.37□□□□□ -1.71
C9orf3-205ENST00000427193 PLEKHJ1Q9NW61 149 aa4.37□□□□□ -1.71
C9orf3-205ENST00000427193 MIOXQ9UGB7 285 aa4.37□□□□□ -1.71
C9orf3-205ENST00000427193 TBC1D24Q9ULP9 559 aa4.37□□□□□ -1.71
C9orf3-205ENST00000427193 DSCAML1Q8TD84 2053 aa4.36□□□□□ -1.71
C9orf3-205ENST00000427193 A0A087X0M5 115 aa4.36□□□□□ -1.71
C9orf3-205ENST00000427193 TRBV6-7A0A0A0MS04 114 aa4.36□□□□□ -1.71
C9orf3-205ENST00000427193 A0A1B0GX30 115 aa4.36□□□□□ -1.71
C9orf3-205ENST00000427193 A0A1W2PQ09 198 aa4.36□□□□□ -1.71
C9orf3-205ENST00000427193 TMEM30CPA0ZSE6 113 aa4.36□□□□□ -1.71
C9orf3-205ENST00000427193 FAM25AB3EWG3 89 aa4.36□□□□□ -1.71
C9orf3-205ENST00000427193 FAM25CB3EWG5 89 aa4.36□□□□□ -1.71
C9orf3-205ENST00000427193 FAM25GB3EWG6 89 aa4.36□□□□□ -1.71
C9orf3-205ENST00000427193 C12orf77C9JDV5 145 aa4.36□□□□□ -1.71
C9orf3-205ENST00000427193 MCRIP1C9JLW8 97 aa4.36□□□□□ -1.71
C9orf3-205ENST00000427193 PPIHO43447 177 aaKnown RBP4.36□□□□□ -1.71
C9orf3-205ENST00000427193 SSX4O60224 188 aa4.36□□□□□ -1.71
C9orf3-205ENST00000427193 RBP4P02753 201 aa4.36□□□□□ -1.71
C9orf3-205ENST00000427193 CD3GP09693 182 aa4.36□□□□□ -1.71
C9orf3-205ENST00000427193 ZNF44P15621 663 aa4.36□□□□□ -1.71
C9orf3-205ENST00000427193 SLC25A16P16260 332 aa4.36□□□□□ -1.71
C9orf3-205ENST00000427193 RCC1P18754 421 aaPredicted RBP4.36□□□□□ -1.71
C9orf3-205ENST00000427193 TBPP20226 339 aa4.36□□□□□ -1.71
C9orf3-205ENST00000427193 HNF1AP20823 631 aa4.36□□□□□ -1.71
C9orf3-205ENST00000427193 IL2RGP31785 369 aa4.36□□□□□ -1.71
C9orf3-205ENST00000427193 CBX5P45973 191 aa4.36□□□□□ -1.71
C9orf3-205ENST00000427193 GPR6P46095 362 aaPredicted RBP4.36□□□□□ -1.71
C9orf3-205ENST00000427193 NPY4RP50391 375 aa4.36□□□□□ -1.71
C9orf3-205ENST00000427193 GMFBP60983 142 aa4.36□□□□□ -1.71
C9orf3-205ENST00000427193 AESQ08117 197 aa4.36□□□□□ -1.71
C9orf3-205ENST00000427193 LOXL1Q08397 574 aaPredicted RBP4.36□□□□□ -1.71
C9orf3-205ENST00000427193 ASAH1Q13510 395 aa4.36□□□□□ -1.71
C9orf3-205ENST00000427193 IL18Q14116 193 aa4.36□□□□□ -1.71
C9orf3-205ENST00000427193 PAN3Q58A45 887 aaKnown RBP4.36□□□□□ -1.71
C9orf3-205ENST00000427193 LY6G6FQ5SQ64 297 aa4.36□□□□□ -1.71
C9orf3-205ENST00000427193 AVPI1Q5T686 147 aa4.36□□□□□ -1.71
C9orf3-205ENST00000427193 DHRS11Q6UWP2 260 aa4.36□□□□□ -1.71
C9orf3-205ENST00000427193 MOB1BQ7L9L4 216 aa4.36□□□□□ -1.71
C9orf3-205ENST00000427193 SLC36A1Q7Z2H8 476 aa4.36□□□□□ -1.71
C9orf3-205ENST00000427193 LHFPL1Q86WI0 220 aa4.36□□□□□ -1.71
C9orf3-205ENST00000427193 SNX29P2Q8IUI4 249 aa4.36□□□□□ -1.71
C9orf3-205ENST00000427193 GVQW1Q8N7I0 195 aa4.36□□□□□ -1.71
C9orf3-205ENST00000427193 TMEM229BQ8NBD8 167 aa4.36□□□□□ -1.71
C9orf3-205ENST00000427193 CLDND2Q8NHS1 167 aa4.36□□□□□ -1.71
C9orf3-205ENST00000427193 ZNF596Q8TC21 504 aa4.36□□□□□ -1.71
C9orf3-205ENST00000427193 TNFRSF14Q92956 283 aa4.36□□□□□ -1.71
C9orf3-205ENST00000427193 TIMD4Q96H15 378 aa4.36□□□□□ -1.71
C9orf3-205ENST00000427193 CMSS1Q9BQ75 279 aaKnown RBP4.36□□□□□ -1.71
C9orf3-205ENST00000427193 AGMATQ9BSE5 352 aa4.36□□□□□ -1.71
C9orf3-205ENST00000427193 PPA2Q9H2U2 334 aa4.36□□□□□ -1.71
C9orf3-205ENST00000427193 C19orf12Q9NSK7 152 aa4.36□□□□□ -1.71
C9orf3-205ENST00000427193 SLC2A8Q9NY64 477 aa4.36□□□□□ -1.71
C9orf3-205ENST00000427193 OR14J1Q9UGF5 321 aa4.36□□□□□ -1.71
C9orf3-205ENST00000427193 GLS2Q9UI32 602 aa4.36□□□□□ -1.71
C9orf3-205ENST00000427193 KIF25Q9UIL4 384 aa4.36□□□□□ -1.71
C9orf3-205ENST00000427193 LINC00312Q9Y6C7 94 aa4.36□□□□□ -1.71
C9orf3-205ENST00000427193 KIAA2026Q5HYC2 2103 aa4.36□□□□□ -1.71
C9orf3-205ENST00000427193 ARHGAP32A7KAX9 2087 aa4.35□□□□□ -1.71
C9orf3-205ENST00000427193 KIR2DS1A0A191URI9 304 aa4.35□□□□□ -1.71
C9orf3-205ENST00000427193 KBTBD11-OT1A0A1B0GTJ5 212 aa4.35□□□□□ -1.71
C9orf3-205ENST00000427193 ISPDA4D126 451 aa4.35□□□□□ -1.71
C9orf3-205ENST00000427193 C17orf98A8MV24 154 aa4.35□□□□□ -1.71
C9orf3-205ENST00000427193 TRDCB7Z8K6 153 aa4.35□□□□□ -1.71
C9orf3-205ENST00000427193 ADAM20O43506 726 aa4.35□□□□□ -1.71
C9orf3-205ENST00000427193 RBBP9O75884 186 aa4.35□□□□□ -1.71
C9orf3-205ENST00000427193 ECDO95905 644 aaPredicted RBP4.35□□□□□ -1.71
C9orf3-205ENST00000427193 MMP9P14780 707 aa4.35□□□□□ -1.71
C9orf3-205ENST00000427193 GZMHP20718 246 aa4.35□□□□□ -1.71
C9orf3-205ENST00000427193 CD34P28906 385 aa4.35□□□□□ -1.71
C9orf3-205ENST00000427193 SLC6A1P30531 599 aa4.35□□□□□ -1.71
C9orf3-205ENST00000427193 RCVRNP35243 200 aa4.35□□□□□ -1.71
C9orf3-205ENST00000427193 SNU13P55769 128 aaKnown RBP4.35□□□□□ -1.71
C9orf3-205ENST00000427193 ACTBP60709 375 aa4.35□□□□□ -1.71
C9orf3-205ENST00000427193 ACTG1P63261 375 aa4.35□□□□□ -1.71
C9orf3-205ENST00000427193 HTD2P86397 168 aa4.35□□□□□ -1.71
C9orf3-205ENST00000427193 ZNF273Q14593 569 aa4.35□□□□□ -1.71
C9orf3-205ENST00000427193 ATXN7L3Q14CW9 347 aaPredicted RBP4.35□□□□□ -1.71
C9orf3-205ENST00000427193 GRK1Q15835 563 aa4.35□□□□□ -1.71
C9orf3-205ENST00000427193 TMEM249Q2WGJ8 235 aa4.35□□□□□ -1.71
C9orf3-205ENST00000427193 Q3ZCU0 254 aa4.35□□□□□ -1.71
C9orf3-205ENST00000427193 KRBOX4Q5JUW0 171 aa4.35□□□□□ -1.71
C9orf3-205ENST00000427193 UTF1Q5T230 341 aa4.35□□□□□ -1.71
C9orf3-205ENST00000427193 ATAD3CQ5T2N8 411 aa4.35□□□□□ -1.71
C9orf3-205ENST00000427193 CLEC2AQ6UVW9 174 aa4.35□□□□□ -1.71
C9orf3-205ENST00000427193 HEPN1Q6WQI6 88 aa4.35□□□□□ -1.71
C9orf3-205ENST00000427193 PQLC2Q6ZP29 291 aa4.35□□□□□ -1.71
C9orf3-205ENST00000427193 C5orf24Q7Z6I8 188 aa4.35□□□□□ -1.71
C9orf3-205ENST00000427193 TRAPPC6BQ86SZ2 158 aa4.35□□□□□ -1.71
C9orf3-205ENST00000427193 TRPT1Q86TN4 253 aaKnown RBP4.35□□□□□ -1.71
C9orf3-205ENST00000427193 Q8N7P7 452 aa4.35□□□□□ -1.71
C9orf3-205ENST00000427193 C8orf31Q8N9H6 132 aa4.35□□□□□ -1.71
C9orf3-205ENST00000427193 ZNF439Q8NDP4 499 aa4.35□□□□□ -1.71
C9orf3-205ENST00000427193 OR10A7Q8NGE5 316 aa4.35□□□□□ -1.71
C9orf3-205ENST00000427193 OR5AP2Q8NGF4 316 aa4.35□□□□□ -1.71
C9orf3-205ENST00000427193 OR4D10Q8NGI6 311 aa4.35□□□□□ -1.71
C9orf3-205ENST00000427193 OR52M1Q8NGK5 317 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms