RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 ACACAQ13085 2346 aa11.74□□□□□ -0.53
RPL28-202ENST00000426763 TRAV30A0A087WSZ9 112 aa11.74□□□□□ -0.53
RPL28-202ENST00000426763 PI4KAP42356 2102 aa11.74□□□□□ -0.53
RPL28-202ENST00000426763 CXorf66Q5JRM2 361 aaPredicted RBP11.74□□□□□ -0.53
RPL28-202ENST00000426763 TMEM88Q6PEY1 159 aa11.74□□□□□ -0.53
RPL28-202ENST00000426763 OR13A1Q8NGR1 328 aa11.74□□□□□ -0.53
RPL28-202ENST00000426763 GPR179Q6PRD1 2367 aa11.74□□□□□ -0.53
RPL28-202ENST00000426763 NPIPB11E5RHQ5 1161 aa11.73□□□□□ -0.53
RPL28-202ENST00000426763 PDE6DO43924 150 aa11.73□□□□□ -0.53
RPL28-202ENST00000426763 FAM157CP0CG43 387 aa11.73□□□□□ -0.53
RPL28-202ENST00000426763 WNT5AP41221 380 aa11.73□□□□□ -0.53
RPL28-202ENST00000426763 NHLH1Q02575 133 aa11.73□□□□□ -0.53
RPL28-202ENST00000426763 FA2HQ7L5A8 372 aa11.73□□□□□ -0.53
RPL28-202ENST00000426763 PRSS33Q8NF86 280 aa11.73□□□□□ -0.53
RPL28-202ENST00000426763 ZNF586Q9NXT0 402 aa11.73□□□□□ -0.53
RPL28-202ENST00000426763 SHISA3A0PJX4 238 aa11.73□□□□□ -0.53
RPL28-202ENST00000426763 SEC14L6B5MCN3 397 aa11.73□□□□□ -0.53
RPL28-202ENST00000426763 TNFRSF9Q07011 255 aa11.73□□□□□ -0.53
RPL28-202ENST00000426763 FXYD3Q14802 87 aa11.73□□□□□ -0.53
RPL28-202ENST00000426763 LGALSLQ3ZCW2 172 aaPredicted RBP11.73□□□□□ -0.53
RPL28-202ENST00000426763 C4orf17Q53FE4 359 aa11.73□□□□□ -0.53
RPL28-202ENST00000426763 ZNF430Q9H8G1 570 aaPredicted RBP11.73□□□□□ -0.53
RPL28-202ENST00000426763 BMPR1BO00238 502 aa11.73□□□□□ -0.53
RPL28-202ENST00000426763 PNRC1Q12796 327 aaPredicted RBP11.73□□□□□ -0.53
RPL28-202ENST00000426763 C7orf69Q9H7B7 122 aa11.73□□□□□ -0.53
RPL28-202ENST00000426763 IGSF23A1L1A6 192 aa11.73□□□□□ -0.53
RPL28-202ENST00000426763 TGFAP01135 160 aa11.73□□□□□ -0.53
RPL28-202ENST00000426763 ATP5G2Q06055 141 aa11.73□□□□□ -0.53
RPL28-202ENST00000426763 ZNF273Q14593 569 aa11.73□□□□□ -0.53
RPL28-202ENST00000426763 OR5AC2Q9NZP5 309 aa11.73□□□□□ -0.53
RPL28-202ENST00000426763 TCF19Q9Y242 345 aa11.73□□□□□ -0.53
RPL28-202ENST00000426763 TRAPPC1Q9Y5R8 145 aa11.73□□□□□ -0.53
RPL28-202ENST00000426763 MBD3L4A6NDZ8 208 aaPredicted RBP11.73□□□□□ -0.53
RPL28-202ENST00000426763 MBD3L3A6NE82 208 aaPredicted RBP11.73□□□□□ -0.53
RPL28-202ENST00000426763 MBD3L5A6NJ08 208 aaPredicted RBP11.73□□□□□ -0.53
RPL28-202ENST00000426763 PAGE4O60829 102 aa11.73□□□□□ -0.53
RPL28-202ENST00000426763 RND2P52198 227 aa11.73□□□□□ -0.53
RPL28-202ENST00000426763 FAM106AQ4KMX7 169 aa11.73□□□□□ -0.53
RPL28-202ENST00000426763 RPL39P5Q59GN2 51 aa11.73□□□□□ -0.53
RPL28-202ENST00000426763 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.73□□□□□ -0.53
RPL28-202ENST00000426763 RBPMS2Q6ZRY4 209 aaKnown RBP11.73□□□□□ -0.53
RPL28-202ENST00000426763 MBD3L2Q8NHZ7 208 aaPredicted RBP11.73□□□□□ -0.53
RPL28-202ENST00000426763 FGFBP3Q8TAT2 258 aa11.73□□□□□ -0.53
RPL28-202ENST00000426763 LYZL4Q96KX0 146 aa11.73□□□□□ -0.53
RPL28-202ENST00000426763 DCTN5Q9BTE1 182 aa11.73□□□□□ -0.53
RPL28-202ENST00000426763 MELTFP08582 738 aa11.72□□□□□ -0.53
RPL28-202ENST00000426763 LINC00869P0C866 280 aa11.72□□□□□ -0.53
RPL28-202ENST00000426763 ZNF146Q15072 292 aa11.72□□□□□ -0.53
RPL28-202ENST00000426763 A0A0G2JK05 382 aa11.72□□□□□ -0.53
RPL28-202ENST00000426763 HAX1O00165 279 aa11.72□□□□□ -0.53
RPL28-202ENST00000426763 CRYGSP22914 178 aa11.72□□□□□ -0.53
RPL28-202ENST00000426763 CENPVQ7Z7K6 275 aaPredicted RBP11.72□□□□□ -0.53
RPL28-202ENST00000426763 FAM103A1Q9BTL3 118 aaKnown RBP11.72□□□□□ -0.53
RPL28-202ENST00000426763 TUBD1Q9UJT1 453 aa11.72□□□□□ -0.53
RPL28-202ENST00000426763 RPL30P62888 115 aaKnown RBP11.72□□□□□ -0.53
RPL28-202ENST00000426763 TMEM187Q14656 261 aa11.72□□□□□ -0.53
RPL28-202ENST00000426763 OSR1Q8TAX0 266 aaPredicted RBP11.72□□□□□ -0.53
RPL28-202ENST00000426763 NAT8BQ9UHF3 227 aa11.72□□□□□ -0.53
RPL28-202ENST00000426763 RD3LP0DJH9 198 aa11.72□□□□□ -0.53
RPL28-202ENST00000426763 BSXQ3C1V8 233 aa11.72□□□□□ -0.53
RPL28-202ENST00000426763 WDR82Q6UXN9 313 aa11.72□□□□□ -0.53
RPL28-202ENST00000426763 STPG3Q8N7X2 389 aa11.72□□□□□ -0.53
RPL28-202ENST00000426763 FOXG1P55316 489 aaPredicted RBP11.71□□□□□ -0.53
RPL28-202ENST00000426763 PDZD11Q5EBL8 140 aa11.71□□□□□ -0.53
RPL28-202ENST00000426763 ALPK2Q86TB3 2170 aa11.71□□□□□ -0.53
RPL28-202ENST00000426763 WFIKKN1Q96NZ8 548 aa11.71□□□□□ -0.53
RPL28-202ENST00000426763 AUP1Q9Y679 476 aa11.71□□□□□ -0.53
RPL28-202ENST00000426763 A0A0G2JNJ9 132 aa11.71□□□□□ -0.53
RPL28-202ENST00000426763 NABP1Q96AH0 204 aa11.71□□□□□ -0.53
RPL28-202ENST00000426763 Q9UFV3 132 aa11.71□□□□□ -0.53
RPL28-202ENST00000426763 P01737 135 aa11.71□□□□□ -0.53
RPL28-202ENST00000426763 RAB5AP20339 215 aa11.71□□□□□ -0.53
RPL28-202ENST00000426763 B3GALT5-AS1P59052 145 aa11.71□□□□□ -0.53
RPL28-202ENST00000426763 CD300CQ08708 224 aa11.71□□□□□ -0.53
RPL28-202ENST00000426763 C2CD4CQ8TF44 421 aa11.71□□□□□ -0.53
RPL28-202ENST00000426763 FAM216AQ8WUB2 273 aa11.71□□□□□ -0.53
RPL28-202ENST00000426763 LYRM2Q9NU23 88 aaPredicted RBP11.71□□□□□ -0.53
RPL28-202ENST00000426763 HELTA6NFD8 242 aa11.71□□□□□ -0.54
RPL28-202ENST00000426763 J3KRW8 73 aa11.71□□□□□ -0.54
RPL28-202ENST00000426763 OR2J3O76001 311 aa11.71□□□□□ -0.54
RPL28-202ENST00000426763 CFDP00746 253 aaPredicted RBP11.71□□□□□ -0.54
RPL28-202ENST00000426763 ORM1P02763 201 aa11.71□□□□□ -0.54
RPL28-202ENST00000426763 MS4A10Q96PG2 267 aa11.71□□□□□ -0.54
RPL28-202ENST00000426763 SPINK4O60575 86 aa11.71□□□□□ -0.54
RPL28-202ENST00000426763 HSBP1O75506 76 aa11.71□□□□□ -0.54
RPL28-202ENST00000426763 COL8A1P27658 744 aa11.71□□□□□ -0.54
RPL28-202ENST00000426763 ATP5IP56385 69 aaPredicted RBP11.71□□□□□ -0.54
RPL28-202ENST00000426763 VKORC1L1Q8N0U8 176 aa11.71□□□□□ -0.54
RPL28-202ENST00000426763 OR10S1Q8NGN2 331 aa11.71□□□□□ -0.54
RPL28-202ENST00000426763 NOL4LQ96MY1 436 aaPredicted RBP11.71□□□□□ -0.54
RPL28-202ENST00000426763 SRSF10O75494 262 aaKnown RBP11.7□□□□□ -0.54
RPL28-202ENST00000426763 HEATR5BQ9P2D3 2071 aa11.7□□□□□ -0.54
RPL28-202ENST00000426763 TPPP2P59282 170 aa11.7□□□□□ -0.54
RPL28-202ENST00000426763 GUCA2BQ16661 112 aa11.7□□□□□ -0.54
RPL28-202ENST00000426763 FAM74A3Q4VXF1 159 aa11.7□□□□□ -0.54
RPL28-202ENST00000426763 MBNL2Q5VZF2 373 aaKnown RBP11.7□□□□□ -0.54
RPL28-202ENST00000426763 EBLN2Q6P2I7 272 aa11.7□□□□□ -0.54
RPL28-202ENST00000426763 H1FOOQ8IZA3 346 aaPredicted RBP11.7□□□□□ -0.54
RPL28-202ENST00000426763 EEF1AKMT3Q96AZ1 226 aa11.7□□□□□ -0.54
RPL28-202ENST00000426763 CA7P43166 264 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms