RNA–Protein interactions for RNA: ENST00000422785.7

CDCA3-202, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 2,760 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-202ENST00000422785 COL25A1Q9BXS0 654 aaPredicted RBP11.4□□□□□ -0.58
CDCA3-202ENST00000422785 TIMM9Q9Y5J7 89 aa11.4□□□□□ -0.58
CDCA3-202ENST00000422785 UBE2L5PA0A1B0GUS4 154 aa11.39□□□□□ -0.59
CDCA3-202ENST00000422785 IGHV3-7P01780 117 aa11.39□□□□□ -0.59
CDCA3-202ENST00000422785 GYPAP02724 150 aa11.39□□□□□ -0.59
CDCA3-202ENST00000422785 KIR2DS2P43631 304 aa11.39□□□□□ -0.59
CDCA3-202ENST00000422785 HAGHQ16775 308 aa11.39□□□□□ -0.59
CDCA3-202ENST00000422785 MBD3L1Q8WWY6 194 aa11.39□□□□□ -0.59
CDCA3-202ENST00000422785 PINX1Q96BK5 328 aaKnown RBP11.39□□□□□ -0.59
CDCA3-202ENST00000422785 LINC00574Q9H8X3 128 aa11.39□□□□□ -0.59
CDCA3-202ENST00000422785 UNKLQ9H9P5 680 aaKnown RBP11.39□□□□□ -0.59
CDCA3-202ENST00000422785 DSCAML1Q8TD84 2053 aa11.39□□□□□ -0.59
CDCA3-202ENST00000422785 C7orf77A4D0Y5 90 aa11.39□□□□□ -0.59
CDCA3-202ENST00000422785 CEBPZOSA8MTT3 80 aa11.39□□□□□ -0.59
CDCA3-202ENST00000422785 C17orf100A8MU93 164 aa11.39□□□□□ -0.59
CDCA3-202ENST00000422785 SLC31A2O15432 143 aa11.39□□□□□ -0.59
CDCA3-202ENST00000422785 SCAF4O95104 1147 aaKnown RBP11.39□□□□□ -0.59
CDCA3-202ENST00000422785 OR9G9P0C7N8 305 aa11.39□□□□□ -0.59
CDCA3-202ENST00000422785 PAX6P26367 422 aa11.39□□□□□ -0.59
CDCA3-202ENST00000422785 CCL8P80075 99 aa11.39□□□□□ -0.59
CDCA3-202ENST00000422785 ICAM4Q14773 271 aa11.39□□□□□ -0.59
CDCA3-202ENST00000422785 CT45A1Q5HYN5 189 aa11.39□□□□□ -0.59
CDCA3-202ENST00000422785 ETV3LQ6ZN32 361 aa11.39□□□□□ -0.59
CDCA3-202ENST00000422785 CENPVQ7Z7K6 275 aaPredicted RBP11.39□□□□□ -0.59
CDCA3-202ENST00000422785 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.39□□□□□ -0.59
CDCA3-202ENST00000422785 CT45A3Q8NHU0 189 aa11.39□□□□□ -0.59
CDCA3-202ENST00000422785 S1PR3Q99500 378 aa11.39□□□□□ -0.59
CDCA3-202ENST00000422785 VSIRQ9H7M9 311 aa11.39□□□□□ -0.59
CDCA3-202ENST00000422785 RPS10P5Q9NQ39 176 aa11.39□□□□□ -0.59
CDCA3-202ENST00000422785 PIEZO2Q9H5I5 2752 aa11.39□□□□□ -0.59
CDCA3-202ENST00000422785 CEP295Q9C0D2 2601 aa11.39□□□□□ -0.59
CDCA3-202ENST00000422785 DYSFO75923 2080 aa11.39□□□□□ -0.59
CDCA3-202ENST00000422785 M0R036 132 aa11.39□□□□□ -0.59
CDCA3-202ENST00000422785 LY86O95711 162 aa11.39□□□□□ -0.59
CDCA3-202ENST00000422785 HSPB1P04792 205 aaKnown RBP11.39□□□□□ -0.59
CDCA3-202ENST00000422785 AKIRIN2Q53H80 203 aa11.39□□□□□ -0.59
CDCA3-202ENST00000422785 TMEM41BQ5BJD5 291 aa11.39□□□□□ -0.59
CDCA3-202ENST00000422785 TCF23Q7RTU1 214 aa11.39□□□□□ -0.59
CDCA3-202ENST00000422785 TGIF2LYQ8IUE0 185 aa11.39□□□□□ -0.59
CDCA3-202ENST00000422785 OR10P1Q8NGE3 313 aa11.39□□□□□ -0.59
CDCA3-202ENST00000422785 DDB2Q92466 427 aa11.39□□□□□ -0.59
CDCA3-202ENST00000422785 CORO2AQ92828 525 aa11.39□□□□□ -0.59
CDCA3-202ENST00000422785 TMEM147Q9BVK8 224 aa11.39□□□□□ -0.59
CDCA3-202ENST00000422785 QTRT1Q9BXR0 403 aaKnown RBP11.39□□□□□ -0.59
CDCA3-202ENST00000422785 BSNQ9UPA5 3926 aa11.38□□□□□ -0.59
CDCA3-202ENST00000422785 ATMQ13315 3056 aa11.38□□□□□ -0.59
CDCA3-202ENST00000422785 RAI1Q7Z5J4 1906 aaPredicted RBP11.38□□□□□ -0.59
CDCA3-202ENST00000422785 ZNF729A6NN14 1252 aaPredicted RBP11.38□□□□□ -0.59
CDCA3-202ENST00000422785 SRP19P09132 144 aaKnown RBP11.38□□□□□ -0.59
CDCA3-202ENST00000422785 FLI1Q01543 452 aaPredicted RBP11.38□□□□□ -0.59
CDCA3-202ENST00000422785 RBPJQ06330 500 aa11.38□□□□□ -0.59
CDCA3-202ENST00000422785 RHEBQ15382 184 aa11.38□□□□□ -0.59
CDCA3-202ENST00000422785 UTF1Q5T230 341 aa11.38□□□□□ -0.59
CDCA3-202ENST00000422785 FAM216BQ8N7L0 139 aa11.38□□□□□ -0.59
CDCA3-202ENST00000422785 LEAP2Q969E1 77 aa11.38□□□□□ -0.59
CDCA3-202ENST00000422785 MSRB2Q9Y3D2 182 aa11.38□□□□□ -0.59
CDCA3-202ENST00000422785 DMXL2Q8TDJ6 3036 aa11.38□□□□□ -0.59
CDCA3-202ENST00000422785 COLCA2A8K830 154 aa11.38□□□□□ -0.59
CDCA3-202ENST00000422785 SNRNP70P08621 437 aaKnown RBP11.38□□□□□ -0.59
CDCA3-202ENST00000422785 ERVK-16P61578 105 aa11.38□□□□□ -0.59
CDCA3-202ENST00000422785 GNB2P62879 340 aa11.38□□□□□ -0.59
CDCA3-202ENST00000422785 ZNF726P1Q15940 193 aa11.38□□□□□ -0.59
CDCA3-202ENST00000422785 TMEM30BQ3MIR4 351 aa11.38□□□□□ -0.59
CDCA3-202ENST00000422785 KHDC3LQ587J8 217 aa11.38□□□□□ -0.59
CDCA3-202ENST00000422785 PRAMEF5Q5TYX0 476 aa11.38□□□□□ -0.59
CDCA3-202ENST00000422785 C1orf229Q6ZS94 237 aaPredicted RBP11.38□□□□□ -0.59
CDCA3-202ENST00000422785 DCAF16Q9NXF7 216 aa11.38□□□□□ -0.59
CDCA3-202ENST00000422785 TANC2Q9HCD6 1990 aa11.38□□□□□ -0.59
CDCA3-202ENST00000422785 NQO2P16083 231 aa11.37□□□□□ -0.59
CDCA3-202ENST00000422785 BTF3P20290 206 aaKnown RBP11.37□□□□□ -0.59
CDCA3-202ENST00000422785 C15orf54Q8N8G6 183 aa11.37□□□□□ -0.59
CDCA3-202ENST00000422785 ZNF439Q8NDP4 499 aa11.37□□□□□ -0.59
CDCA3-202ENST00000422785 OR4A16Q8NH70 328 aa11.37□□□□□ -0.59
CDCA3-202ENST00000422785 NANPQ8TBE9 248 aa11.37□□□□□ -0.59
CDCA3-202ENST00000422785 RND1Q92730 232 aa11.37□□□□□ -0.59
CDCA3-202ENST00000422785 RCC1LQ96I51 464 aaKnown RBP11.37□□□□□ -0.59
CDCA3-202ENST00000422785 IDI2-AS1Q9NZ38 188 aa11.37□□□□□ -0.59
CDCA3-202ENST00000422785 KLF2Q9Y5W3 355 aaPredicted RBP11.37□□□□□ -0.59
CDCA3-202ENST00000422785 SAA2-SAA4A0A096LPE2 208 aa11.37□□□□□ -0.59
CDCA3-202ENST00000422785 FAM87AP0C7U9 286 aa11.37□□□□□ -0.59
CDCA3-202ENST00000422785 SAA2P0DJI9 122 aaPredicted RBP11.37□□□□□ -0.59
CDCA3-202ENST00000422785 AKR1C3P42330 323 aa11.37□□□□□ -0.59
CDCA3-202ENST00000422785 OR2B8PP59922 312 aa11.37□□□□□ -0.59
CDCA3-202ENST00000422785 SPCS3P61009 180 aa11.37□□□□□ -0.59
CDCA3-202ENST00000422785 VWC2Q2TAL6 325 aa11.37□□□□□ -0.59
CDCA3-202ENST00000422785 SPINK9Q5DT21 86 aa11.37□□□□□ -0.59
CDCA3-202ENST00000422785 OR52E5Q8NH55 327 aa11.37□□□□□ -0.59
CDCA3-202ENST00000422785 RXFP4Q8TDU9 374 aa11.37□□□□□ -0.59
CDCA3-202ENST00000422785 WFIKKN1Q96NZ8 548 aa11.37□□□□□ -0.59
CDCA3-202ENST00000422785 CLCC1Q96S66 551 aa11.37□□□□□ -0.59
CDCA3-202ENST00000422785 C20orf24Q9BUV8 137 aa11.37□□□□□ -0.59
CDCA3-202ENST00000422785 TUBA4BQ9H853 241 aa11.37□□□□□ -0.59
CDCA3-202ENST00000422785 NBEAQ8NFP9 2946 aa11.37□□□□□ -0.59
CDCA3-202ENST00000422785 LOC102723971A0A1B0GUV8 181 aa11.36□□□□□ -0.59
CDCA3-202ENST00000422785 VSTM5A8MXK1 200 aa11.36□□□□□ -0.59
CDCA3-202ENST00000422785 IFNA17P01571 189 aa11.36□□□□□ -0.59
CDCA3-202ENST00000422785 PDLIM3Q53GG5 364 aaPredicted RBP11.36□□□□□ -0.59
CDCA3-202ENST00000422785 ZNF787Q6DD87 383 aa11.36□□□□□ -0.59
CDCA3-202ENST00000422785 ADAM5Q6NVV9 412 aa11.36□□□□□ -0.59
CDCA3-202ENST00000422785 SSX9Q7RTT3 188 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms